Identification and Characterization of Bovine Viral Diarrhea Virus from Indonesian Cattle (IDENTIFIKASI DAN KARAKTERISASI VIRUS BOVINE VIRAL DIARRHEA DARI SAPI INDONESIA)

Bovine viral diarrhea virus (BVDV) is an important viral disease, which a ubiquitous pathogen of cattle with worldwide economic importance and due to its misdiagnose with other viruses. The goal of the current study w as to identify and characterize of BVDV by r everse t ranscriptase polymerase chain reaction (RT-PCR) and followed by sequence genome analyses. Blood, feces, and semen samples were collected from 588 selected cattle from animals suffering from diarrhea and respiratory manifestation. RTPCR results showed that the 69 (11. 74%) samples were positive to BVDV. Further molecular characterization was conducted only with 17 PCR positive samples. The results indicated the 17 Indonesian BVD virus isolates were belonging to the genotype-1 of BVDV (BVDV-1) based on sequence analysis and a phylogenetic relationship between Indonesian BVDV isolates and BVDV in the world. This finding is the first report of BVD-1 circulated in Indonesian cattle.

[1]  Sudhir Kumar,et al.  MEGA3: Integrated software for Molecular Evolutionary Genetics Analysis and sequence alignment , 2004, Briefings Bioinform..

[2]  D. Stringfellow,et al.  Analytical sensitivity of assays used for detection of bovine viral diarrhea virus in semen samples from the Southeastern United States. , 2003, Veterinary microbiology.

[3]  B. Rodwell,et al.  Outbreak of foetal infection with bovine pestivirus in a central Queensland beef herd. , 2001, Australian veterinary journal.

[4]  B. Charleston,et al.  Establishment of persistent infection with non-cytopathic bovine viral diarrhoea virus in cattle is associated with a failure to induce type I interferon. , 2001, The Journal of general virology.

[5]  J. Collins,et al.  Bovine Viral Diarrhea Virus in New World Camelids , 2000, Journal of veterinary diagnostic investigation : official publication of the American Association of Veterinary Laboratory Diagnosticians, Inc.

[6]  D. Deregt,et al.  Typing of porcine reproductive and respiratory syndrome viruses by a multiplex PCR assay , 1997, Journal of clinical microbiology.

[7]  H. Houe Epidemiology of bovine viral diarrhea virus. , 1995, The Veterinary clinics of North America. Food animal practice.

[8]  A. Hamel,et al.  Rapid detection of bovine viral diarrhea virus by using RNA extracted directly from assorted specimens and a one-tube reverse transcription PCR assay , 1995, Journal of clinical microbiology.

[9]  J. Thompson,et al.  CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. , 1994, Nucleic acids research.

[10]  L. Potgieter,et al.  Single and Double Polymerase Chain Reaction for Detection of Bovine Viral Diarrhea Virus in Tissue Culture and Sera , 1993, Journal of veterinary diagnostic investigation : official publication of the American Association of Veterinary Laboratory Diagnosticians, Inc.

[11]  D. Anderson,et al.  Molecular cloning and nucleotide sequence of the pestivirus bovine viral diarrhea virus. , 1988, Virology.

[12]  Baker Jc Bovine viral diarrhea virus: a review. , 1987 .

[13]  S. Ghorashi,et al.  Detection of bovine viral diarrhea virus in bovine semen using nested-PCR , 2007 .