Characterization of the REC114‐MEI4‐IHO1 complex regulating meiotic DNA double‐strand break formation

Meiotic recombination is initiated by the formation of DNA double-strand breaks (DSBs), essential for fertility and genetic diversity. In the mouse, DSBs are formed by the catalytic TOPOVIL complex consisting of SPO11 and TOPOVIBL. To preserve genome integrity, the activity of the TOPOVIL complex is finely controlled by several meiotic factors including REC114, MEI4 and IHO1, but the underlying mechanism is poorly understood. Here, we report that mouse REC114 forms homodimers, that it associates with MEI4 as a 2:1 heterotrimer that further dimerizes, and that IHO1 forms coiled-coil based tetramers. Using AlphaFold2 modelling combined with biochemical characterization we uncovered the molecular details of these assemblies. Finally, we show that IHO1 directly interacts with the PH domain of REC114 by recognizing the same surface as TOPOVIBL and another meiotic factor ANKRD31. These results provide strong evidence for the existence of a ternary IHO1-REC114-MEI4 complex and show that REC114 is a potential regulatory platform mediating mutually exclusive interactions with several partners.

[1]  H. Bourbon,et al.  Evolution and Diversity of the TopoVI and TopoVI-like Subunits With Extensive Divergence of the TOPOVIBL subunit , 2022, bioRxiv.

[2]  C. Brun,et al.  TOPOVIBL-REC114 interaction regulates meiotic DNA double-strand breaks , 2021, bioRxiv.

[3]  Julian Lange,et al.  Four-pronged negative feedback of DSB machinery in meiotic DNA-break control in mice , 2021, Nucleic acids research.

[4]  S. Keeney,et al.  DNA-driven condensation assembles the meiotic DNA break machinery , 2021, Nature.

[5]  J. Weir,et al.  Novel mechanistic insights into the role of Mer2 as the keystone of meiotic DNA break formation , 2020, eLife.

[6]  C. Petosa,et al.  Exploring the structure and dynamics of macromolecular complexes by native mass spectrometry. , 2020, Journal of proteomics.

[7]  A. Pastore,et al.  A Guide to Native Mass Spectrometry to determine complex interactomes of molecular machines , 2020, The FEBS journal.

[8]  Eleni P. Mimitou,et al.  Structural and functional characterization of the Spo11 core complex , 2020, bioRxiv.

[9]  J. Forejt,et al.  Mouse ANKRD31 Regulates Spatiotemporal Patterning of Meiotic Recombination Initiation and Ensures Recombination between X and Y Sex Chromosomes. , 2019, Molecular cell.

[10]  Mehmet E. Karasu,et al.  Ensuring meiotic DNA break formation in the mouse pseudoautosomal region , 2019, bioRxiv.

[11]  I. Henderson,et al.  Hotspots for Initiation of Meiotic Recombination , 2018, Front. Genet..

[12]  Mehmet E. Karasu,et al.  REC114 partner ANKRD31 controls number, timing and location of meiotic DNA breaks , 2018, bioRxiv.

[13]  C. Brun,et al.  Mouse REC114 is essential for meiotic DNA double-strand break formation and forms a complex with MEI4 , 2018, Life Science Alliance.

[14]  C. Petosa,et al.  Characterizing Intact Macromolecular Complexes Using Native Mass Spectrometry. , 2018, Methods in molecular biology.

[15]  N. Kleckner,et al.  Asy2/Mer2: an evolutionarily conserved mediator of meiotic recombination, pairing, and global chromosome compaction , 2017, Genes & development.

[16]  Attila Tóth,et al.  Meiotic DNA break formation requires the unsynapsed chromosome axis-binding protein IHO1 (CCDC36) in mice , 2016, Nature Cell Biology.

[17]  C. Brun,et al.  The TopoVIB-Like protein family is required for meiotic DNA double-strand break formation , 2016, Science.

[18]  N. Hunter Meiotic Recombination: The Essence of Heredity. , 2015, Cold Spring Harbor perspectives in biology.

[19]  Rajeev Kumar,et al.  MEI4 – a central player in the regulation of meiotic DNA double‐strand break formation in the mouse , 2015, Journal of Cell Science.

[20]  Erik G Marklund,et al.  Bayesian deconvolution of mass and ion mobility spectra: from binary interactions to polydisperse ensembles. , 2015, Analytical chemistry.

[21]  C. Brautigam Calculations and Publication-Quality Illustrations for Analytical Ultracentrifugation Data. , 2015, Methods in enzymology.

[22]  S. Keeney,et al.  Mechanism and regulation of meiotic recombination initiation. , 2014, Cold Spring Harbor perspectives in biology.

[23]  F. Baudat,et al.  Meiotic recombination in mammals: localization and regulation , 2013, Nature Reviews Genetics.

[24]  B. de Massy Initiation of meiotic recombination: how and where? Conservation and specificities among eukaryotes. , 2013, Annual review of genetics.

[25]  C. Robinson,et al.  Massign: an assignment strategy for maximizing information from the mass spectra of heterogeneous protein assemblies. , 2012, Analytical chemistry.

[26]  K. Shirahige,et al.  Spo11-Accessory Proteins Link Double-Strand Break Sites to the Chromosome Axis in Early Meiotic Recombination , 2011, Cell.

[27]  H. Bourbon,et al.  Functional conservation of Mei4 for meiotic DNA double-strand break formation from yeasts to mice. , 2010, Genes & development.

[28]  T. Shibata,et al.  Cdc7-dependent phosphorylation of Mer2 facilitates initiation of yeast meiotic recombination. , 2008, Genes & development.

[29]  M. J. Neale,et al.  Interactions between Mei4, Rec114, and other proteins required for meiotic DNA double-strand break formation in Saccharomyces cerevisiae , 2007, Chromosoma.

[30]  S. Keeney,et al.  Cyclin-Dependent Kinase Directly Regulates Initiation of Meiotic Recombination , 2006, Cell.

[31]  L. Reinholdt,et al.  Mei1 is epistatic to Dmc1 during mouse meiosis , 2005, Chromosoma.

[32]  S. Keeney,et al.  Antiviral protein Ski8 is a direct partner of Spo11 in meiotic DNA break formation, independent of its cytoplasmic role in RNA metabolism. , 2004, Molecular cell.

[33]  K. Jiao,et al.  Support for a Meiotic Recombination Initiation Complex: Interactions among Rec102p, Rec104p, and Spo11p , 2003, Molecular and Cellular Biology.

[34]  R. Camerini-Otero,et al.  The mouse Spo11 gene is required for meiotic chromosome synapsis. , 2000, Molecular cell.

[35]  S. Keeney,et al.  Chromosome synapsis defects and sexually dimorphic meiotic progression in mice lacking Spo11. , 2000, Molecular cell.

[36]  P. Schuck,et al.  Size-distribution analysis of macromolecules by sedimentation velocity ultracentrifugation and lamm equation modeling. , 2000, Biophysical journal.