Automated manipulation of systems biology models using libSBML within Taverna workflows
暂无分享,去创建一个
Douglas B. Kell | Stian Soiland-Reyes | Peter Li | Thomas M. Oinn | D. Kell | T. Oinn | S. Soiland-Reyes | P. Li
[1] Edward A. Lee,et al. CONCURRENCY AND COMPUTATION: PRACTICE AND EXPERIENCE Concurrency Computat.: Pract. Exper. 2000; 00:1–7 Prepared using cpeauth.cls [Version: 2002/09/19 v2.02] Taverna: Lessons in creating , 2022 .
[2] Carole A. Goble,et al. Taverna/myGrid: Aligning a Workflow System with the Life Sciences Community , 2007, Workflows for e-Science, Scientific Workflows for Grids.
[3] Hiroaki Kitano,et al. The systems biology markup language (SBML): a medium for representation and exchange of biochemical network models , 2003, Bioinform..
[4] C. Steinbeck,et al. The Chemistry Development Kit (CDK): An Open‐Source Java Library for Chemo‐ and Bioinformatics. , 2003 .
[5] Douglas B Kell,et al. The virtual human: Towards a global systems biology of multiscale, distributed biochemical network models , 2007, IUBMB life.
[6] Steven C. Lawlor,et al. GenMAPP, a new tool for viewing and analyzing microarray data on biological pathways , 2002, Nature Genetics.
[7] Jihoon Kim,et al. ArrayXPath: mapping and visualizing microarray gene-expression data with integrated biological pathway resources using Scalable Vector Graphics , 2004, Nucleic Acids Res..
[8] Carole A. Goble,et al. Taverna: a tool for building and running workflows of services , 2006, Nucleic Acids Res..
[9] Dennis Gannon,et al. Workflows for e-Science, Scientific Workflows for Grids , 2014 .
[10] Patrick Lambrix,et al. A review of standards for data exchange within systems biology , 2007, Proteomics.
[11] Hiroaki Kitano,et al. CellDesigner: a process diagram editor for gene-regulatory and biochemical networks , 2003 .
[12] D. Kell. Systems biology, metabolic modelling and metabolomics in drug discovery and development. , 2006, Drug discovery today.
[13] Douglas B. Kell,et al. maxdLoad2 and maxdBrowse: standards-compliant tools for microarray experimental annotation, data management and dissemination , 2005, BMC Bioinformatics.
[14] Matthew R. Pocock,et al. Taverna: a tool for the composition and enactment of bioinformatics workflows , 2004, Bioinform..
[15] A. Brazma,et al. Standards for systems biology , 2006, Nature Reviews Genetics.
[16] D. Kell. Metabolomics, modelling and machine learning in systems biology – towards an understanding of the languages of cells , 2006, The FEBS journal.
[17] Douglas B Kell,et al. Theodor Bücher Lecture. Metabolomics, modelling and machine learning in systems biology - towards an understanding of the languages of cells. Delivered on 3 July 2005 at the 30th FEBS Congress and the 9th IUBMB conference in Budapest. , 2006, The FEBS journal.