Flexibility in the order of action and in the enzymology of the nuclease, polymerases, and ligase of vertebrate non-homologous DNA end joining: relevance to cancer, aging, and the immune system
暂无分享,去创建一个
K. Schwarz | M. Lieber | Haihui Lu | J. Gu | Jiafeng Gu
[1] T. E. Wilson,et al. Evidence that base stacking potential in annealed 3' overhangs determines polymerase utilization in yeast nonhomologous end joining. , 2008, DNA repair.
[2] T. E. Wilson,et al. Modes of interaction among yeast Nej1, Lif1 and Dnl4 proteins and comparison to human XLF, XRCC4 and Lig4. , 2007, DNA repair.
[3] Barbara Corneo,et al. Rag mutations reveal robust alternative end joining , 2007, Nature.
[4] Michael M. Murphy,et al. IgH class switching and translocations use a robust non-classical end-joining pathway , 2007, Nature.
[5] K. Schwarz,et al. Single-stranded DNA ligation and XLF-stimulated incompatible DNA end ligation by the XRCC4-DNA ligase IV complex: influence of terminal DNA sequence , 2007, Nucleic acids research.
[6] P. Charneau,et al. Role for DNA repair factor XRCC4 in immunoglobulin class switch recombination , 2007, The Journal of experimental medicine.
[7] A. Tomkinson,et al. Role of Dnl4–Lif1 in nonhomologous end-joining repair complex assembly and suppression of homologous recombination , 2007, Nature Structural &Molecular Biology.
[8] G. Chu,et al. Cernunnos/XLF promotes the ligation of mismatched and noncohesive DNA ends , 2007, Proceedings of the National Academy of Sciences.
[9] U. Pannicke,et al. Length-dependent Binding of Human XLF to DNA and Stimulation of XRCC4·DNA Ligase IV Activity* , 2007, Journal of Biological Chemistry.
[10] D. Ramsden,et al. Loading of the Nonhomologous End Joining Factor, Ku, on Protein-occluded DNA Ends* , 2007, Journal of Biological Chemistry.
[11] Qi Ding,et al. trans Autophosphorylation at DNA-Dependent Protein Kinase's Two Major Autophosphorylation Site Clusters Facilitates End Processing but Not End Joining , 2007, Molecular and Cellular Biology.
[12] M. Lieber,et al. XRCC4:DNA ligase IV can ligate incompatible DNA ends and can ligate across gaps , 2007, The EMBO journal.
[13] L. Povirk,et al. Processing of 3′-Phosphoglycolate-terminated DNA Double Strand Breaks by Artemis Nuclease* , 2006, Journal of Biological Chemistry.
[14] F. Alt,et al. Evolution of the immunoglobulin heavy chain class switch recombination mechanism. , 2007, Advances in immunology.
[15] T. Kunkel,et al. Structural insight into the substrate specificity of DNA Polymerase mu. , 2007, Nature structural & molecular biology.
[16] T. Kunkel,et al. Structural insight into the substrate specificity of DNA Polymerase μ , 2007, Nature Structural &Molecular Biology.
[17] S. Jackson,et al. Evolutionary and Functional Conservation of the DNA Non-homologous End-joining Protein, XLF/Cernunnos* , 2006, Journal of Biological Chemistry.
[18] J. Palecek,et al. The Smc5-Smc6 DNA Repair Complex , 2006, Journal of Biological Chemistry.
[19] Yunmei Ma,et al. DNA-PKcs Dependence of Artemis Endonucleolytic Activity, Differences between Hairpins and 5′ or 3′ Overhangs* , 2006, Journal of Biological Chemistry.
[20] J. Murnane. Telomeres and chromosome instability. , 2006, DNA repair.
[21] L. Povirk. Biochemical mechanisms of chromosomal translocations resulting from DNA double-strand breaks. , 2006, DNA repair.
[22] D. Ramsden,et al. A specific loop in human DNA polymerase mu allows switching between creative and DNA-instructed synthesis , 2006, Nucleic acids research.
[23] P. Jeggo,et al. DNA‐PK autophosphorylation facilitates Artemis endonuclease activity , 2006, The EMBO journal.
[24] B. Bertocci,et al. Nonoverlapping functions of DNA polymerases mu, lambda, and terminal deoxynucleotidyltransferase during immunoglobulin V(D)J recombination in vivo. , 2006, Immunity.
[25] E. Selsing. Ig class switching: targeting the recombinational mechanism. , 2006, Current opinion in immunology.
[26] A. Tomkinson,et al. DNA ligases: structure, reaction mechanism, and function. , 2006, Chemical reviews.
[27] A. Fischer,et al. Cernunnos Interacts with the XRCC4·DNA-ligase IV Complex and Is Homologous to the Yeast Nonhomologous End-joining Factor Nej1* , 2006, Journal of Biological Chemistry.
[28] J. Murnane,et al. Telomeres, chromosome instability and cancer , 2006, Nucleic acids research.
[29] S. Jackson,et al. XLF Interacts with the XRCC4-DNA Ligase IV Complex to Promote DNA Nonhomologous End-Joining , 2006, Cell.
[30] A. Fischer,et al. Cernunnos, a Novel Nonhomologous End-Joining Factor, Is Mutated in Human Immunodeficiency with Microcephaly , 2006, Cell.
[31] Yunmei Ma,et al. The DNA-dependent Protein Kinase Catalytic Subunit Phosphorylation Sites in Human Artemis* , 2005, Journal of Biological Chemistry.
[32] T. E. Wilson,et al. DNA Joint Dependence of Pol X Family Polymerase Action in Nonhomologous End Joining* , 2005, Journal of Biological Chemistry.
[33] T. Kunkel,et al. A gradient of template dependence defines distinct biological roles for family X polymerases in nonhomologous end joining. , 2005, Molecular cell.
[34] Yunmei Ma,et al. The Artemis:DNA-PKcs endonuclease cleaves DNA loops, flaps, and gaps. , 2005, DNA repair.
[35] Yunmei Ma,et al. THE DNA-PKcs PHOSPHORYLATION SITES IN HUMAN ARTEMIS , 2005 .
[36] Yunmei Ma,et al. A biochemically defined system for mammalian nonhomologous DNA end joining. , 2004, Molecular cell.
[37] F. Alt,et al. An evolutionarily conserved target motif for immunoglobulin class-switch recombination , 2004, Nature Immunology.
[38] M. Neuberger,et al. Mismatch recognition and uracil excision provide complementary paths to both Ig switching and the A/T-focused phase of somatic mutation. , 2004, Molecular cell.
[39] Alberto Martin,et al. Altered somatic hypermutation and reduced class-switch recombination in exonuclease 1–mutant mice , 2004, Nature Immunology.
[40] T. Kunkel,et al. Implication of DNA Polymerase λ in Alignment-based Gap Filling for Nonhomologous DNA End Joining in Human Nuclear Extracts* , 2004, Journal of Biological Chemistry.
[41] R. Ghirlando,et al. Tetramerization and DNA ligase IV interaction of the DNA double-strand break repair protein XRCC4 are mutually exclusive. , 2003, Journal of molecular biology.
[42] M. Lieber,et al. Nucleic acid structures and enzymes in the immunoglobulin class switch recombination mechanism. , 2003, DNA repair.
[43] C. Berek,et al. Immunoglobulin kappa light chain gene rearrangement is impaired in mice deficient for DNA polymerase mu. , 2003, Immunity.
[44] M. Goodman,et al. Processive AID-catalysed cytosine deamination on single-stranded DNA simulates somatic hypermutation , 2003, Nature.
[45] F. Alt,et al. The influence of transcriptional orientation on endogenous switch region function , 2003, Nature Immunology.
[46] M. Lieber,et al. R-loops at immunoglobulin class switch regions in the chromosomes of stimulated B cells , 2003, Nature Immunology.
[47] D. Ramsden,et al. Polymerase Mu Is a DNA-Directed DNA/RNA Polymerase , 2003, Molecular and Cellular Biology.
[48] A. Tomkinson,et al. A Physical and Functional Interaction between Yeast Pol4 and Dnl4-Lif1 Links DNA Synthesis and Ligation in Nonhomologous End Joining* , 2002, The Journal of Biological Chemistry.
[49] T. Kunkel,et al. DNA Polymerase (cid:1) , a Novel DNA Repair Enzyme in Human Cells* , 2022 .
[50] Yunmei Ma,et al. Hairpin Opening and Overhang Processing by an Artemis/DNA-Dependent Protein Kinase Complex in Nonhomologous End Joining and V(D)J Recombination , 2002, Cell.
[51] M. Gellert. V(D)J recombination: RAG proteins, repair factors, and regulation. , 2002, Annual review of biochemistry.
[52] T. Kunkel,et al. DNA polymerase lambda, a novel DNA repair enzyme in human cells. , 2002, The Journal of biological chemistry.
[53] F. Alt,et al. DNA double strand break repair and chromosomal translocation: Lessons from animal models , 2001, Oncogene.
[54] J. Walker,et al. Structure of the Ku heterodimer bound to DNA and its implications for double-strand break repair , 2001, Nature.
[55] F. Alt,et al. The nonhomologous end-joining pathway of DNA repair is required for genomic stability and the suppression of translocations. , 2000, Proceedings of the National Academy of Sciences of the United States of America.
[56] M. Lieber,et al. Efficient Processing of DNA Ends during Yeast Nonhomologous End Joining , 1999, The Journal of Biological Chemistry.
[57] M. Gellert,et al. DNA binding of Xrcc4 protein is associated with V(D)J recombination but not with stimulation of DNA ligase IV activity , 1999, The EMBO journal.
[58] R. West,et al. Productive and Nonproductive Complexes of Ku and DNA-Dependent Protein Kinase at DNA Termini , 1998, Molecular and Cellular Biology.
[59] T. Lindahl,et al. A newly identified DNA ligase of Saccharomyces cerevisiae involved in RAD52-independent repair of DNA double-strand breaks. , 1997, Genes & development.
[60] S. Jackson,et al. Identification of Saccharomyces cerevisiae DNA ligase IV: involvement in DNA double‐strand break repair , 1997, The EMBO journal.
[61] M. Lieber,et al. Yeast DNA ligase IV mediates non-homologous DNA end joining , 1997, Nature.
[62] M. Lieber,et al. Activity of DNA ligase IV stimulated by complex formation with XRCC4 protein in mammalian cells , 1997, Nature.
[63] T. Lindahl,et al. DNA Ligase IV from HeLa Cell Nuclei* , 1996, The Journal of Biological Chemistry.
[64] C. Harris,et al. Deletions and insertions in the p53 tumor suppressor gene in human cancers: confirmation of the DNA polymerase slippage/misalignment model. , 1996, Cancer research.