When Cold is Better: Climate-Driven Elevation Shifts Yield Complex Patterns of Diversification and Demography in an Alpine Specialist (American Pika, Ochotona princeps)
暂无分享,去创建一个
[1] Robert D. Holt,et al. On the evolutionary ecology of species' ranges , 2003 .
[2] Robert P. Anderson,et al. Geographical distributions of spiny pocket mice in South America: insights from predictive models , 2002 .
[3] J. Rozas,et al. Statistical properties of new neutrality tests against population growth. , 2002, Molecular biology and evolution.
[4] S. C. Porter. Late Wisconsin mountain glaciation in the western United States. , 1983 .
[5] W. Collins,et al. The Community Climate System Model Version 3 (CCSM3) , 2006 .
[6] M. Peacock. Determining natal dispersal patterns in a population of North American pikas (Ochotona princeps) using direct mark-resight and indirect genetic methods , 1997 .
[7] L. Knowles,et al. Importance of genetic drift during Pleistocene divergence as revealed by analyses of genomic variation , 2005, Molecular ecology.
[8] L. Weider,et al. Glacial refugia, haplotype distributions, and clonal richness of the Daphnia pulex complex in arctic Canada , 2003, Molecular ecology.
[9] B. Riddle,et al. The molecular phylogeographic bridge between deep and shallow history in continental biotas. , 1996, Trends in ecology & evolution.
[10] Derrick J. Zwickl. Genetic algorithm approaches for the phylogenetic analysis of large biological sequence datasets under the maximum likelihood criterion , 2006 .
[11] D. Irwin. PHYLOGEOGRAPHIC BREAKS WITHOUT GEOGRAPHIC BARRIERS TO GENE FLOW , 2002, Evolution; international journal of organic evolution.
[12] Y. Fu,et al. Statistical tests of neutrality of mutations against population growth, hitchhiking and background selection. , 1997, Genetics.
[13] Robert P. Anderson,et al. Maximum entropy modeling of species geographic distributions , 2006 .
[14] A. Drummond,et al. Bayesian inference of population size history from multiple loci , 2008, BMC Evolutionary Biology.
[15] Alexei J Drummond,et al. Estimating mutation parameters, population history and genealogy simultaneously from temporally spaced sequence data. , 2002, Genetics.
[16] David Posada,et al. MODELTEST: testing the model of DNA substitution , 1998, Bioinform..
[17] P. Duffy,et al. High-resolution simulations of global climate, part 2: effects of increased greenhouse cases , 2003 .
[18] L. Wang,et al. Behavioral thermoregulation in the pika Ochotona princeps: a field study using radiotelemetry. , 1974, Canadian journal of zoology.
[19] A. Rambaut,et al. BEAST: Bayesian evolutionary analysis by sampling trees , 2007, BMC Evolutionary Biology.
[20] Andrew T. Smith,et al. The effect of habitat fragmentation on dispersal patterns, mating behavior, and genetic variation in a pika (Ochotona princeps) metapopulation , 1997, Oecologia.
[21] R. B. Jackson,et al. Global biodiversity scenarios for the year 2100. , 2000, Science.
[22] James J. Hack,et al. Response of Climate Simulation to a New Convective Parameterization in the National Center for Atmospheric Research Community Climate Model (CCM3) , 1998 .
[23] Hiroyasu Hasumi,et al. K-1 Coupled GCM (MIROC) Description , 2004 .
[24] James H. Brown. Mammals on Mountaintops: Nonequilibrium Insular Biogeography , 1971, The American Naturalist.
[25] G. Hewitt. Post-glacial re-colonization of European biota , 1999 .
[26] G. Hewitt. Genetic consequences of climatic oscillations in the Quaternary. , 2004, Philosophical transactions of the Royal Society of London. Series B, Biological sciences.
[27] R. Jansson,et al. Evolutionary consequences of changes in species' geographical distributions driven by Milankovitch climate oscillations. , 2000, Proceedings of the National Academy of Sciences of the United States of America.
[28] C. Graham,et al. Integrating GIS-based environmental data into evolutionary biology. , 2008, Trends in ecology & evolution.
[29] J. L. Parra,et al. Very high resolution interpolated climate surfaces for global land areas , 2005 .
[30] Miroslav Dudík,et al. Modeling of species distributions with Maxent: new extensions and a comprehensive evaluation , 2008 .
[31] J. Mead. Quaternary records of pika, Ochotona, in North America , 2008 .
[32] J. Felsenstein. Phylogenies from molecular sequences: inference and reliability. , 1988, Annual review of genetics.
[33] R. Guralnick,et al. BioGeomancer: Automated Georeferencing to Map the World's Biodiversity Data , 2006, PLoS biology.
[34] A. Peterson. Predicting the Geography of Species’ Invasions via Ecological Niche Modeling , 2003, The Quarterly Review of Biology.
[35] Andrew P. Martin,et al. Historical biogeography of two alpine butterflies in the Rocky Mountains: broad‐scale concordance and local‐scale discordance , 2005 .
[36] Andrew T. Smith,et al. Colonization in a pika population: dispersal vs philopatry , 1983, Behavioral Ecology and Sociobiology.
[37] D. Hafner. Pikas and Permafrost: Post-Wisconsin Historical Zoogeography of Ochotona in the Southern Rocky Mountains, U.S.A. , 1994 .
[38] D. Hafner. North American Pika (Ochotona princeps) as a Late Quaternary Biogeographic Indicator Species , 1993, Quaternary Research.
[39] D. Hafner,et al. Historical and Ecological Biogeography of Nearctic Pikas (Lagomorpha: Ochotonidae) , 1995 .
[40] G. Hewitt. Some genetic consequences of ice ages, and their role in divergence and speciation , 1996 .
[41] N. Stenseth,et al. Multiple glacial refugia in the North American Arctic: inference from phylogeography of the collared lemming (Dicrostonyx groenlandicus) , 2002, Proceedings of the Royal Society of London. Series B: Biological Sciences.
[42] S. Edwards,et al. PERSPECTIVE: GENE DIVERGENCE, POPULATION DIVERGENCE, AND THE VARIANCE IN COALESCENCE TIME IN PHYLOGEOGRAPHIC STUDIES , 2000, Evolution; international journal of organic evolution.
[43] David W. Macdonald,et al. The identification of 100 ecological questions of high policy relevance in the UK , 2006 .
[44] A. Peterson,et al. Conservatism of ecological niche characteristics in North American plant species over the Pleistocene‐to‐Recent transition , 2006 .
[45] Wen-Hsiung Li,et al. Molecular systematics of pikas (genus Ochotona) inferred from mitochondrial DNA sequences. , 2000, Molecular phylogenetics and evolution.
[46] D. Grayson. A brief history of Great Basin pikas , 2005 .
[47] Xavier Messeguer,et al. DnaSP, DNA polymorphism analyses by the coalescent and other methods , 2003, Bioinform..
[48] J. Thompson,et al. CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. , 1994, Nucleic acids research.
[49] M. P. Cummings,et al. PAUP* Phylogenetic analysis using parsimony (*and other methods) Version 4 , 2000 .
[50] A. Lister. The impact of Quaternary Ice Ages on mammalian evolution. , 2004, Philosophical transactions of the Royal Society of London. Series B, Biological sciences.
[51] J. Jouzel,et al. Climate and atmospheric history of the past 420,000 years from the Vostok ice core, Antarctica , 1999, Nature.
[52] J. H. Wright,et al. Late-Quaternary Environments of the United States , 1983 .
[53] John Bell,et al. A review of methods for the assessment of prediction errors in conservation presence/absence models , 1997, Environmental Conservation.
[54] Erik A. Beever,et al. PATTERNS OF APPARENT EXTIRPATION AMONG ISOLATED POPULATIONS OF PIKAS (OCHOTONA PRINCEPS) IN THE GREAT BASIN , 2003 .
[55] V. M. Kotlyakov,et al. 420 000 years of climate and atmospheric history revealed by the Vostok deep Antarctic ice core , 1999 .
[56] Andy Purvis,et al. Evolutionary biology and practical conservation: bridging a widening gap , 2008, Molecular ecology.
[57] H. Harpending,et al. Population growth makes waves in the distribution of pairwise genetic differences. , 1992, Molecular biology and evolution.
[58] A. Peterson,et al. Locating Pleistocene Refugia: Comparing Phylogeographic and Ecological Niche Model Predictions , 2007, PloS one.
[59] H. Henttonen,et al. Phylogeography of the circumpolar Paranoplocephala arctica species complex (Cestoda: Anoplocephalidae) parasitizing collared lemmings (Dicrostonyx spp.) , 2003, Molecular ecology.
[60] Eileen Scanlon,et al. Portable information technologies for supporting graphical mathematics investigations: overview of the PIGMI Project , 2001, J. Comput. Assist. Learn..
[61] O. Pybus,et al. Bayesian coalescent inference of past population dynamics from molecular sequences. , 2005, Molecular biology and evolution.
[62] A. Peterson,et al. Ecological niches as stable distributional constraints on mammal species, with implications for Pleistocene extinctions and climate change projections for biodiversity , 2004 .
[63] Michael P. Cummings,et al. PAUP* [Phylogenetic Analysis Using Parsimony (and Other Methods)] , 2004 .
[64] Andrew P. Martin,et al. Body size, metabolic rate, generation time, and the molecular clock. , 1993, Proceedings of the National Academy of Sciences of the United States of America.
[65] V. Sánchez‐Cordero,et al. Conservatism of ecological niches in evolutionary time , 1999, Science.
[66] K. Fredga,et al. Phylogeographic structure and mitochondrial DNA variation in true lemmings (Lemmus) from the Eurasian Arctic , 1999 .
[67] C. Graham,et al. Niche Conservatism: Integrating Evolution, Ecology, and Conservation Biology , 2005 .
[68] T. Schmitt,et al. Cryptic differentiation in alpine‐endemic, high‐altitude butterflies reveals down‐slope glacial refugia , 2007, Molecular ecology.
[69] P. Taberlet,et al. Comparative phylogeography and postglacial colonization routes in Europe , 1998, Molecular ecology.
[70] D. Albach,et al. Comparative phylogeography of the Veronica alpina complex in Europe and North America , 2006, Molecular ecology.
[71] G. Hewitt. The genetic legacy of the Quaternary ice ages , 2000, Nature.
[72] R. Guralnick. Differential effects of past climate warming on mountain and flatland species distributions: a multispecies North American mammal assessment , 2006 .
[73] Andrew T. Smith. The Distribution and Dispersal of Pikas: Influences of Behavior and Climate , 1974 .
[74] A. Knoll,et al. The biotic crisis and the future of evolution , 2001, Proceedings of the National Academy of Sciences of the United States of America.
[75] J. Cook,et al. Genetic consequences of Pleistocene glaciations for the tundra vole (Microtus oeconomus) in Beringia , 2004, Molecular ecology.
[76] M. Slatkin,et al. Pairwise comparisons of mitochondrial DNA sequences in stable and exponentially growing populations. , 1991, Genetics.
[77] G. Hewitt. The structure of biodiversity – insights from molecular phylogeography , 2004, Frontiers in Zoology.
[78] Sudhir Kumar,et al. MEGA3: Integrated software for Molecular Evolutionary Genetics Analysis and sequence alignment , 2004, Briefings Bioinform..