Meeting Report: “Metagenomics, Metadata and Meta-analysis” (M3) Workshop at the Pacific Symposium on Biocomputing 2010

This report summarizes the M3 Workshop held at the January 2010 Pacific Symposium on Biocomputing. The workshop, organized by Genomic Standards Consortium members, included five contributed talks, a series of short presentations from stakeholders in the genomics standards community, a poster session, and, in the evening, an open discussion session to review current projects and examine future directions for the GSC and its stakeholders.

[1]  I-Min A. Chen,et al.  The Genomes On Line Database (GOLD) in 2007: status of genomic and metagenomic projects and their associated metadata , 2007, Nucleic Acids Res..

[2]  Nikos Kyrpides,et al.  The Genomes On Line Database (GOLD) in 2007: status of genomic and metagenomic projects and their associated metadata , 2007, Nucleic Acids Res..

[3]  Meeting Report: “Metagenomics, Metadata and Meta-analysis” (M3) Special Interest Group at ISMB 2009 , 2009, Standards in genomic sciences.

[4]  Chris F. Taylor,et al.  The minimum information about a genome sequence (MIGS) specification , 2008, Nature Biotechnology.

[5]  Renzo Kottmann,et al.  Meeting Report from the Genomic Standards Consortium (GSC) Workshop 9 , 2010, Standards in genomic sciences.

[6]  Renzo Kottmann,et al.  Meeting Report from the Genomic Standards Consortium (GSC) Workshops 6 and 7 , 2009, Standards in genomic sciences.

[7]  Krzysztof Fidelis,et al.  Protein structure prediction center in CASP8 , 2009, Proteins.

[8]  D. N. Carss,et al.  Meeting report , 1975, Appetite.

[9]  Alfonso Valencia,et al.  Overview of BioCreAtIvE: critical assessment of information extraction for biology , 2005, BMC Bioinformatics.

[10]  Renzo Kottmann,et al.  Meeting report: the fourth Genomic Standards Consortium (GSC) workshop. , 2008, Omics : a journal of integrative biology.

[11]  Natalia N. Ivanova,et al.  A phylogeny-driven genomic encyclopaedia of Bacteria and Archaea , 2009, Nature.

[12]  A. Halpern,et al.  The Sorcerer II Global Ocean Sampling Expedition: Northwest Atlantic through Eastern Tropical Pacific , 2007, PLoS biology.

[13]  Jan O. Korbel,et al.  Quantifying environmental adaptation of metabolic pathways in metagenomics , 2009, Proceedings of the National Academy of Sciences.

[14]  T. Tatusova,et al.  NCBI reference sequences (RefSeq): a curated non-redundant sequence database of genomes, transcripts and proteins , 2006, Nucleic Acids Research.

[15]  Renzo Kottmann,et al.  Meeting report: the fifth Genomic Standards Consortium (GSC) workshop. , 2008, Omics : a journal of integrative biology.

[16]  S. Kravitz,et al.  CAMERA: A Community Resource for Metagenomics , 2007, PLoS biology.

[17]  Tatiana Tatusova,et al.  NCBI Reference Sequence (RefSeq): a curated non-redundant sequence database of genomes, transcripts and proteins , 2004, Nucleic Acids Res..