Phylogenetic comparative analysis and the secondary structure of ribonuclease P RNA--a review.

[1]  C. Woese,et al.  5S RNA secondary structure , 1975, Nature.

[2]  W. Salser.  Globin mRNA sequences: analysis of base pairing and evolutionary implications. , 1978, Cold Spring Harbor symposia on quantitative biology.

[3]  W. Salser,et al.  Computer method for predicting the secondary structure of single-stranded RNA. , 1978, Nucleic acids research.

[4]  N. Pace,et al.  Precursor-specific nucleotide sequences can govern RNA folding , 1979, Cell.

[5]  Michael Zuker,et al.  Optimal computer folding of large RNA sequences using thermodynamics and auxiliary information , 1981, Nucleic Acids Res..

[6]  H. Noller,et al.  Secondary structure of 16S ribosomal RNA. , 1981, Science.

[7]  Sidney Altman,et al.  Nucleotide sequence of the gene encoding the RNA subunit (M1 RNA) of ribonuclease P from Escherichia coli , 1982, Cell.

[8]  R. Waring,et al.  Making ends meet: a model for RNA splicing in fungal mitochondria , 1982, Nature.

[9]  N. Pace,et al.  The RNA moiety of ribonuclease P is the catalytic subunit of the enzyme , 1983, Cell.

[10]  R. Gutell,et al.  Detailed analysis of the higher-order structure of 16S-like ribosomal ribonucleic acids. , 1983, Microbiological reviews.

[11]  M. Zuker,et al.  Secondary structure of the Tetrahymena ribosomal RNA intervening sequence: structural homology with fungal mitochondrial intervening sequences. , 1983, Proceedings of the National Academy of Sciences of the United States of America.

[12]  F. Nagawa,et al.  Nucleotide sequence and stability of the RNA component of RNase P from a temperature-sensitive mutant of E. coli. , 1983, Nucleic acids research.

[13]  B. Dujon,et al.  Conservation of RNA secondary structures in two intron families including mitochondrial‐, chloroplast‐ and nuclear‐encoded members. , 1983, The EMBO journal.

[14]  J. Devereux,et al.  A comprehensive set of sequence analysis programs for the VAX , 1984, Nucleic Acids Res..

[15]  S. Altman,et al.  A catalytic RNA and its gene from Salmonella typhimurium. , 1985, Science.

[16]  N. Pace,et al.  Ion dependence of the Bacillus subtilis RNase P reaction. , 1985, The Journal of biological chemistry.

[17]  W. Walker.  5 S and 5.8 S ribosomal RNA sequences and protist phylogenetics. , 1985, Bio Systems.

[18]  C. Pleij,et al.  A new principle of RNA folding based on pseudoknotting. , 1985, Nucleic acids research.

[19]  N. Pace,et al.  The RNA component of the Bacillus subtilis RNase P. Sequence, activity, and partial secondary structure. , 1986, The Journal of biological chemistry.

[20]  Ignacio Tinoco,et al.  A dynamic programming algorithm for finding alternative RNA secondary structures , 1986, Nucleic Acids Res..

[21]  Gary J. Olsen,et al.  Ribosomal RNA phylogeny and the primary lines of evolutionary descent , 1986, Cell.

[22]  R. Gutell,et al.  Higher order structure in ribosomal RNA. , 1986, The EMBO journal.

[23]  D. Turner,et al.  Improved free-energy parameters for predictions of RNA duplex stability. , 1986, Proceedings of the National Academy of Sciences of the United States of America.

[24]  Kathryn E. Sidman,et al.  The protein identification resource (PIR). , 1986, Nucleic acids research.

[25]  C. E. Longfellow,et al.  Improved parameters for prediction of RNA structure. , 1987, Cold Spring Harbor symposia on quantitative biology.

[26]  N. Lawrence,et al.  Heterologous enzyme function in Escherichia coli and the selection of genes encoding the catalytic RNA subunit of RNase P. , 1987, Proceedings of the National Academy of Sciences of the United States of America.

[27]  S. Osawa,et al.  Origin and evolution of organisms as deduced from 5S ribosomal RNA sequences. , 1987, Molecular biology and evolution.

[28]  C. Guthrie,et al.  Saccharomyces cerevisiae has a U1-like small nuclear RNA with unexpected properties. , 1987, Science.

[29]  I. Tinoco,et al.  A pseudoknotted RNA oligonucleotide , 1988, Nature.

[30]  N. Pace,et al.  Role of the protein moiety of ribonuclease P, a ribonucleoprotein enzyme. , 1988, Science.

[31]  D. Turner,et al.  RNA structure prediction. , 1988, Annual review of biophysics and biophysical chemistry.

[32]  N. Pace,et al.  The secondary structure of ribonuclease P RNA, the catalytic element of a ribonucleoprotein enzyme , 1988, Cell.

[33]  R. Gutell,et al.  A compilation of large subunit RNA sequences presented in a structural format. , 1988, Nucleic acids research.

[34]  R Nussinov,et al.  An improved secondary structure computation method and its application to intervening sequence in the human alpha-likeglobin mRNA precursors , 1988, Comput. Appl. Biosci..

[35]  M. Zuker.  On finding all suboptimal foldings of an RNA molecule. , 1989, Science.

[36]  J. Neefs,et al.  Compilation of small ribosomal subunit RNA sequences. , 1990, Nucleic acids research.