Start and the restriction point.

Commitment to division requires that cells sense, interpret, and respond appropriately to multiple signals. In most eukaryotes, cells commit to division in G1 before DNA replication. Beyond a point, known as Start in yeast and the restriction point in mammals, cells will proceed through the cell cycle despite changes in upstream signals. In metazoans, misregulated G1 control can lead to developmental problems or disease, so it is important to understand how cells decipher the myriad external and internal signals that contribute to the fundamental all-or-none decision to divide. Extensive study of G1 control in the budding yeast Saccharomyces cerevisiae and mammalian culture systems has revealed highly similar networks regulating commitment. However, protein sequences of functional orthologs often indicate a total lack of conservation suggesting significant evolution of G1 control. Here, we review recent studies defining the conserved and diverged features of G1 control and highlight systems-level aspects that may be common to other biological regulatory networks.

[1]  Steven F Dowdy,et al.  Cip/Kip proteins: more than just CDKs inhibitors. , 2004, Genes & development.

[2]  L. Hartwell,et al.  Genetic control of the cell-division cycle in yeast. I. Detection of mutants. , 1970, Proceedings of the National Academy of Sciences of the United States of America.

[3]  B. Futcher,et al.  Recruitment of Cln3 Cyclin to Promoters Controls Cell Cycle Entry via Histone Deacetylase and Other Targets , 2009, PLoS biology.

[4]  D. Cobrinik Pocket proteins and cell cycle control , 2005, Oncogene.

[5]  J. Nevins,et al.  Autoregulatory control of E2F1 expression in response to positive and negative regulators of cell cycle progression. , 1994, Genes & development.

[6]  S. Dalton,et al.  Developmental activation of the Rb-E2F pathway and establishment of cell cycle-regulated cyclin-dependent kinase activity during embryonic stem cell differentiation. , 2005, Molecular biology of the cell.

[7]  Eytan Domany,et al.  Two phases of mitogenic signaling unveil roles for p53 and EGR1 in elimination of inconsistent growth signals. , 2011, Molecular cell.

[8]  James E. Ferrell,et al.  Bistability in cell signaling: How to make continuous processes discontinuous, and reversible processes irreversible. , 2001, Chaos.

[9]  Gilles Charvin,et al.  Origin of Irreversibility of Cell Cycle Start in Budding Yeast , 2010, PLoS biology.

[10]  J E Ferrell,et al.  The biochemical basis of an all-or-none cell fate switch in Xenopus oocytes. , 1998, Science.

[11]  John G. Albeck,et al.  Frequency-modulated pulses of ERK activity transmit quantitative proliferation signals. , 2013, Molecular cell.

[12]  Tony Kouzarides,et al.  Retinoblastoma protein recruits histone deacetylase to repress transcription , 1998, Nature.

[13]  A. Zetterberg,et al.  Kinetic analysis of regulatory events in G1 leading to proliferation or quiescence of Swiss 3T3 cells. , 1985, Proceedings of the National Academy of Sciences of the United States of America.

[14]  Paul Russell,et al.  Constraining G1-specific transcription to late G1 phase: the MBF-associated corepressor Nrm1 acts via negative feedback. , 2006, Molecular cell.

[15]  Curt Wittenberg,et al.  Cln3 Activates G1-Specific Transcription via Phosphorylation of the SBF Bound Repressor Whi5 , 2004, Cell.

[16]  James M. Roberts,et al.  Requirement of p27Kip1 for Restriction Point Control of the Fibroblast Cell Cycle , 1996, Science.

[17]  J. Tyson,et al.  The dynamics of cell cycle regulation. , 2002, BioEssays : news and reviews in molecular, cellular and developmental biology.

[18]  L. Hartwell,et al.  Genetic control of the cell division cycle in yeast. , 1974, Science.

[19]  P. Kaldis,et al.  Mammalian cell-cycle regulation: several Cdks, numerous cyclins and diverse compensatory mechanisms , 2009, Oncogene.

[20]  Nicolas E. Buchler,et al.  Evolution of networks and sequences in eukaryotic cell cycle control , 2011, Philosophical Transactions of the Royal Society B: Biological Sciences.

[21]  N. Pavletich Mechanisms of cyclin-dependent kinase regulation: structures of Cdks, their cyclin activators, and Cip and INK4 inhibitors. , 1999, Journal of molecular biology.

[22]  G. Stein,et al.  Self‐renewal of human embryonic stem cells is supported by a shortened G1 cell cycle phase , 2006, Journal of cellular physiology.

[23]  Bruce Futcher,et al.  Growth Rate and Cell Size Modulate the Synthesis of, and Requirement for, G1-Phase Cyclins at Start , 2004, Molecular and Cellular Biology.

[24]  A. Zetterberg,et al.  Coordination between cell growth and cell cycle transit in animal cells. , 1991, Cold Spring Harbor symposia on quantitative biology.

[25]  John J. Tyson,et al.  Hysteresis drives cell-cycle transitions in Xenopus laevis egg extracts , 2002, Proceedings of the National Academy of Sciences of the United States of America.

[26]  R. Austin,et al.  Applications of Microfluidics in Stem Cell Biology , 2012, BioNanoScience.

[27]  D. A. Foster,et al.  Regulation of G1 Cell Cycle Progression: Distinguishing the Restriction Point from a Nutrient-Sensing Cell Growth Checkpoint(s). , 2010, Genes & cancer.

[28]  G. Lahav,et al.  Encoding and Decoding Cellular Information through Signaling Dynamics , 2013, Cell.

[29]  B. Futcher,et al.  The transcriptional network activated by Cln3 cyclin at the G1-to-S transition of the yeast cell cycle , 2010, Genome Biology.

[30]  J. Ferrell,et al.  Interlinked Fast and Slow Positive Feedback Loops Drive Reliable Cell Decisions , 2005, Science.

[31]  K Nasmyth,et al.  Control of the yeast cell cycle by the Cdc28 protein kinase. , 1993, Current opinion in cell biology.

[32]  G C Johnston,et al.  Coordination of growth with cell division in the yeast Saccharomyces cerevisiae. , 1977, Experimental cell research.

[33]  A. Zetterberg,et al.  Existence of a commitment program for mitosis in early G1 in tumour cells , 1995, Cell proliferation.

[34]  David O. Morgan,et al.  Cascades of multisite phosphorylation control Sic1 destruction at the onset of S phase , 2011, Nature.

[35]  David O. Morgan,et al.  The Cell Cycle: Principles of Control , 2014 .

[36]  J. Nevins,et al.  A role for Myc in facilitating transcription activation by E2F1 , 2008, Oncogene.

[37]  B. Tu,et al.  Acetyl-CoA induces transcription of the key G1 cyclin CLN3 to promote entry into the cell division cycle in Saccharomyces cerevisiae , 2013, Proceedings of the National Academy of Sciences.

[38]  Yang Guo,et al.  p27Kip1 and Cyclin Dependent Kinase 2 Regulate Passage Through the Restriction Point , 2006, Cell cycle.

[39]  Andreas Doncic,et al.  Feedforward regulation ensures stability and rapid reversibility of a cellular state. , 2013, Molecular cell.

[40]  Matt Thomson,et al.  Pluripotency Factors in Embryonic Stem Cells Regulate Differentiation into Germ Layers , 2011, Cell.

[41]  John J. Tyson,et al.  Irreversible cell-cycle transitions are due to systems-level feedback , 2007, Nature Cell Biology.

[42]  Frederick R. Cross,et al.  Positive feedback of G1 cyclins ensures coherent cell cycle entry , 2008, Nature.

[43]  Gilles Charvin,et al.  A Microfluidic Device for Temporally Controlled Gene Expression and Long-Term Fluorescent Imaging in Unperturbed Dividing Yeast Cells , 2008, PloS one.

[44]  M. West,et al.  Origin of bistability underlying mammalian cell cycle entry , 2011, Molecular systems biology.

[45]  R. Weinberg,et al.  The retinoblastoma protein and cell cycle control , 1995, Cell.

[46]  A. Zetterberg,et al.  Single cell analysis of G1 check points-the relationship between the restriction point and phosphorylation of pRb. , 2005, Experimental cell research.

[47]  James M. Roberts,et al.  CDK inhibitors: positive and negative regulators of G1-phase progression. , 1999, Genes & development.

[48]  A. Pardee,et al.  A restriction point for control of normal animal cell proliferation. , 1974, Proceedings of the National Academy of Sciences of the United States of America.

[49]  R. D. de Bruin,et al.  Binding Specificity of the G1/S Transcriptional Regulators in Budding Yeast , 2013, PloS one.

[50]  A. Pardee G1 events and regulation of cell proliferation. , 1989, Science.

[51]  J. Skotheim,et al.  Cell Size Control in Yeast , 2012, Current Biology.

[52]  Tae J. Lee,et al.  A bistable Rb–E2F switch underlies the restriction point , 2008, Nature Cell Biology.

[53]  M. Smolka,et al.  Linking DNA replication checkpoint to MBF cell‐cycle transcription reveals a distinct class of G1/S genes , 2012, The EMBO journal.

[54]  C. Dehay,et al.  Cell Cycle Features of Primate Embryonic Stem Cells , 2006, Stem cells.

[55]  John R Yates,et al.  DNA replication stress differentially regulates G1/S genes via Rad53‐dependent inactivation of Nrm1 , 2012, The EMBO journal.

[56]  A. Iavarone,et al.  Distinct mechanisms of cell cycle arrest control the decision between differentiation and senescence in human neuroblastoma cells , 2001, Proceedings of the National Academy of Sciences of the United States of America.

[57]  Mike Tyers,et al.  CDK Activity Antagonizes Whi5, an Inhibitor of G1/S Transcription in Yeast , 2004, Cell.

[58]  Nicolas E. Buchler,et al.  Protein sequestration generates a flexible ultrasensitive response in a genetic network , 2009, Molecular systems biology.

[59]  J. Skotheim,et al.  Commitment to a cellular transition precedes genome-wide transcriptional change. , 2011, Molecular cell.

[60]  James M. Roberts,et al.  A Skp2 autoinduction loop and restriction point control , 2007, The Journal of cell biology.

[61]  Andreas Doncic,et al.  Distinct interactions select and maintain a specific cell fate. , 2011, Molecular cell.

[62]  Jeremy E. Purvis,et al.  p53 Dynamics Control Cell Fate , 2012, Science.

[63]  J. Ferrell Simple rules for complex processes: new lessons from the budding yeast cell cycle. , 2011, Molecular cell.

[64]  Chao Zhang,et al.  Switching Cdk2 on or off with small molecules to reveal requirements in human cell proliferation. , 2011, Molecular cell.

[65]  J. Ferrell,et al.  Tuning the Activation Threshold of a Kinase Network by Nested Feedback Loops , 2009, Science.

[66]  Adam P. Rosebrock,et al.  Daughter-Specific Transcription Factors Regulate Cell Size Control in Budding Yeast , 2009, PLoS biology.

[67]  S. Quake,et al.  Versatile, fully automated, microfluidic cell culture system. , 2007, Analytical chemistry.