A Broadly Applicable 3-D Neuron Tracing Method Based on Open-Curve Snake
暂无分享,去创建一个
Chia-Ling Tsai | Badrinath Roysam | Yu Wang | Arunachalam Narayanaswamy | Arunachalam Narayanaswamy | B. Roysam | Chia-Ling Tsai | Yu Wang
[1] Eugene W. Myers,et al. Automatic Neuron Tracing in Volumetric Microscopy Images with Anisotropic Path Searching , 2010, MICCAI.
[2] Horst Bischof,et al. A Novel Approach for Detection of Tubular Objects and Its Application to Medical Image Analysis , 2008, DAGM-Symposium.
[3] Xiaobo Zhou,et al. Reconstruction of the neuromuscular junction connectome , 2010, Bioinform..
[4] Erik Meijering,et al. Neuron tracing in perspective , 2010, Cytometry. Part A : the journal of the International Society for Analytical Cytology.
[5] Hanchuan Peng,et al. V3D enables real-time 3D visualization and quantitative analysis of large-scale biological image data sets , 2010, Nature Biotechnology.
[6] Douglas B. Ehlenberger,et al. New techniques for imaging, digitization and analysis of three-dimensional neural morphology on multiple scales , 2005, Neuroscience.
[7] Armen Stepanyants,et al. Detection of the optimal neuron traces in confocal microscopy images , 2009, Journal of Neuroscience Methods.
[8] Koon Yin Kong,et al. Computer Assisted Analysis of Microtubule Dynamics in Living Cells , 2005, 2005 IEEE Engineering in Medicine and Biology 27th Annual Conference.
[9] Alejandro F. Frangi,et al. Muliscale Vessel Enhancement Filtering , 1998, MICCAI.
[10] James A. Sethian,et al. Level Set Methods and Fast Marching Methods , 1999 .
[11] Olga Veksler,et al. Fast Approximate Energy Minimization via Graph Cuts , 2001, IEEE Trans. Pattern Anal. Mach. Intell..
[12] Badrinath Roysam,et al. Automated Three-Dimensional Tracing of Neurons in Confocal and Brightfield Images , 2003, Microscopy and Microanalysis.
[13] J C Fiala,et al. Reconstruct: a free editor for serial section microscopy , 2005, Journal of microscopy.
[14] Isabelle Bloch,et al. Design and study of flux-based features for 3D vascular tracking , 2009, 2009 IEEE International Symposium on Biomedical Imaging: From Nano to Macro.
[15] Leo Joskowicz,et al. Vessels-Cut: A Graph Based Approach to Patient-Specific Carotid Arteries Modeling , 2009, 3DPH.
[16] Ghassan Hamarneh,et al. VascuSynth: Simulating vascular trees for generating volumetric image data with ground-truth segmentation and tree analysis , 2010, Comput. Medical Imaging Graph..
[17] Khalid A. Al-Kofahi,et al. Rapid automated three-dimensional tracing of neurons from confocal image stacks , 2002, IEEE Transactions on Information Technology in Biomedicine.
[18] Mathews Jacob,et al. A Novel Approach to Neurite Tracing in Fluorescence Microscopy Images , 2003, SIP.
[19] Laurent D. Cohen,et al. Tubular Structure Segmentation Based on Minimal Path Method and Anisotropic Enhancement , 2011, International Journal of Computer Vision.
[20] Stephen T. C. Wong,et al. Repulsive force based snake model to segment and track neuronal axons in 3D microscopy image stacks , 2006, NeuroImage.
[21] Adam Mann. Teams battle for neuron prize , 2010, Nature.
[22] Badrinath Roysam,et al. The FARSIGHT Trace Editor: An Open Source Tool for 3-D Inspection and Efficient Pattern Analysis Aided Editing of Automated Neuronal Reconstructions , 2011, Neuroinformatics.
[23] Murat Yuksel,et al. Automatic selection of parameters for vessel/neurite segmentation algorithms , 2005, IEEE Transactions on Image Processing.
[24] M. Pool,et al. NeuriteTracer: A novel ImageJ plugin for automated quantification of neurite outgrowth , 2008, Journal of Neuroscience Methods.
[25] Hongsheng Li,et al. Automated actin filament segmentation, tracking and tip elongation measurements based on open active contour models , 2009, 2009 IEEE International Symposium on Biomedical Imaging: From Nano to Macro.
[26] Xiaobo Zhou,et al. DYNAMIC LOCAL TRACING FOR 3D AXON CURVILINEAR STRUCTURE DETECTION FROM MICROSCOPIC IMAGE STACK , 2007, 2007 4th IEEE International Symposium on Biomedical Imaging: From Nano to Macro.
[27] Horst Bischof,et al. A Novel Robust Tube Detection Filter for 3D Centerline Extraction , 2005, SCIA.
[28] Ju Lu,et al. Semi-Automated Reconstruction of Neural Processes from Large Numbers of Fluorescence Images , 2009, PloS one.
[29] Pascal Fua,et al. Delineating trees in noisy 2D images and 3D image-stacks , 2010, 2010 IEEE Computer Society Conference on Computer Vision and Pattern Recognition.
[30] Junaed Sattar. Snakes , Shapes and Gradient Vector Flow , 2022 .
[31] Laurent D. Cohen,et al. Global Minimum for Active Contour Models: A Minimal Path Approach , 1997, International Journal of Computer Vision.
[32] Steve M. Potter,et al. MDL Constrained 3-D Grayscale Skeletonization Algorithm for Automated Extraction of Dendrites and Spines from Fluorescence Confocal Images , 2009, Neuroinformatics.
[33] Michael Scholz,et al. New methods for the computer-assisted 3-D reconstruction of neurons from confocal image stacks , 2004, NeuroImage.
[34] Yoav Freund,et al. A Short Introduction to Boosting , 1999 .
[35] Stephen T. C. Wong,et al. Using nonlinear diffusion and mean shift to detect and connect cross-sections of axons in 3D optical microscopy images , 2008, Medical Image Anal..
[36] Barbara Cutler,et al. Robust Adaptive 3-D Segmentation of Vessel Laminae From Fluorescence Confocal Microscope Images and Parallel GPU Implementation , 2010, IEEE Transactions on Medical Imaging.
[37] Eric L. Miller,et al. Automated Axon Tracking of 3D Confocal Laser Scanning Microscopy Images Using Guided Probabilistic Region Merging , 2007, Neuroinformatics.
[38] Edsger W. Dijkstra,et al. A note on two problems in connexion with graphs , 1959, Numerische Mathematik.
[39] Stephen R. Aylward,et al. Segmenting 3D Branching Tubular Structures Using Cores , 2003, MICCAI.
[40] Ganesh Sundaramoorthi,et al. Vessel Segmentation with Automatic Centerline Extraction Using Tubular Tree Segmentation , 2009 .
[41] Nicholas Ayache,et al. Model-Based Detection of Tubular Structures in 3D Images , 2000, Comput. Vis. Image Underst..
[42] Andrew R. Cohen,et al. Automated tracing and volume measurements of neurons from 3‐D confocal fluorescence microscopy data , 1994, Journal of microscopy.
[43] Hanchuan Peng,et al. Automatic reconstruction of 3D neuron structures using a graph-augmented deformable model , 2010, Bioinform..
[44] Stephen R. Aylward,et al. Initialization, noise, singularities, and scale in height ridge traversal for tubular object centerline extraction , 2002, IEEE Transactions on Medical Imaging.