Structure of histone-based chromatin in Archaea
暂无分享,去创建一个
Karolin Luger | Natalie G Ahn | Thomas Lee | N. Ahn | K. Luger | J. Reeve | S. Bhattacharyya | T. Santangelo | P. Dyer | K. Sandman | Thomas J Santangelo | Francesca Mattiroli | Sudipta Bhattacharyya | Pamela N Dyer | Alison E White | Kathleen Sandman | Brett W Burkhart | Kyle R Byrne | John N Reeve | Francesca Mattiroli | Alison E. White | Thomas Lee | Brett W. Burkhart | Pamela N. Dyer
[1] H. Kono,et al. Crystal structure of the overlapping dinucleosome composed of hexasome and octasome , 2017, Science.
[2] T. Oshima,et al. Archaeal histone distribution is associated with archaeal genome base composition. , 2017, The Journal of general and applied microbiology.
[3] Thijs J. G. Ettema,et al. Asgard archaea illuminate the origin of eukaryotic cellular complexity , 2017, Nature.
[4] Thijs J. G. Ettema,et al. Complex archaea that bridge the gap between prokaryotes and eukaryotes , 2015, Nature.
[5] Borries Demeler,et al. Characterization of Size, Anisotropy, and Density Heterogeneity of Nanoparticles by Sedimentation Velocity , 2014, Analytical chemistry.
[6] L. Aravind,et al. Protein and DNA modifications: evolutionary imprints of bacterial biochemical diversification and geochemistry on the provenance of eukaryotic epigenetics. , 2014, Cold Spring Harbor perspectives in biology.
[7] Mingzhu Wang,et al. Cryo-EM Study of the Chromatin Fiber Reveals a Double Helix Twisted by Tetranucleosomal Units , 2014, Science.
[8] Gary Gorbet,et al. A parametrically constrained optimization method for fitting sedimentation velocity experiments. , 2014, Biophysical journal.
[9] K. Moore,et al. An alternative beads‐on‐a‐string chromatin architecture in Thermococcus kodakarensis , 2013, EMBO reports.
[10] Yvonne N Fondufe-Mittendorf,et al. Archaeal nucleosome positioning in vivo and in vitro is directed by primary sequence motifs , 2013, BMC Genomics.
[11] Marc T. Facciotti,et al. Sequencing of Seven Haloarchaeal Genomes Reveals Patterns of Genomic Flux , 2012, PloS one.
[12] Travis H. Hileman,et al. Genetics Techniques for Thermococcus kodakarensis , 2012, Front. Microbio..
[13] J. Reeve,et al. Deletion of alternative pathways for reductant recycling in Thermococcus kodakarensis increases hydrogen production , 2011, Molecular microbiology.
[14] S. McNicholas,et al. Presenting your structures: the CCP4mg molecular-graphics software , 2011, Acta crystallographica. Section D, Biological crystallography.
[15] N. Pannu,et al. REFMAC5 for the refinement of macromolecular crystal structures , 2011, Acta crystallographica. Section D, Biological crystallography.
[16] Randy J. Read,et al. Overview of the CCP4 suite and current developments , 2011, Acta crystallographica. Section D, Biological crystallography.
[17] M. Mann,et al. Andromeda: a peptide search engine integrated into the MaxQuant environment. , 2011, Journal of proteome research.
[18] Song Tan,et al. Nucleosome structural studies. , 2011, Current opinion in structural biology.
[19] Steven Henikoff,et al. Histone variants — ancient wrap artists of the epigenome , 2010, Nature Reviews Molecular Cell Biology.
[20] Stefano Piccolo,et al. MicroRNA control of signal transduction , 2010, Nature Reviews Molecular Cell Biology.
[21] Randy J. Read,et al. Acta Crystallographica Section D Biological , 2003 .
[22] Vincent B. Chen,et al. Correspondence e-mail: , 2000 .
[23] J. Reeve,et al. Thermococcus kodakarensis Genetics: TK1827-Encoded β-Glycosidase, New Positive-Selection Protocol, and Targeted and Repetitive Deletion Technology , 2009, Applied and Environmental Microbiology.
[24] M. Mann,et al. MaxQuant enables high peptide identification rates, individualized p.p.b.-range mass accuracies and proteome-wide protein quantification , 2008, Nature Biotechnology.
[25] J. Reeve,et al. Archaeal chromatin proteins histone HMtB and Alba have lost DNA-binding ability in laboratory strains of Methanothermobacter thermautotrophicus , 2008, Extremophiles.
[26] Randy J. Read,et al. Phaser crystallographic software , 2007, Journal of applied crystallography.
[27] M. Mann,et al. In-gel digestion for mass spectrometric characterization of proteins and proteomes , 2006, Nature Protocols.
[28] J. Reeve,et al. Archaeal histones and the origin of the histone fold. , 2006, Current opinion in microbiology.
[29] Kevin Cowtan,et al. research papers Acta Crystallographica Section D Biological , 2005 .
[30] Karolin Luger,et al. Molecular recognition of the nucleosomal "supergroove". , 2004, Proceedings of the National Academy of Sciences of the United States of America.
[31] Steven Henikoff,et al. Phylogenomics of the nucleosome , 2003, Nature Structural Biology.
[32] J. Reeve,et al. Conserved Eukaryotic Histone-Fold Residues Substituted into an Archaeal Histone Increase DNA Affinity but Reduce Complex Flexibility , 2003, Journal of bacteriology.
[33] J. Zlatanova,et al. The archaeal histone-fold protein HMf organizes DNA into bona fide chromatin fibers. , 2001, Structure.
[34] J A Lake,et al. An ancestral nuclear protein assembly: Crystal structure of the Methanopyrus kandleri histone , 2001, Protein science : a publication of the Protein Society.
[35] J. Reeve,et al. Molecular components of the archaeal nucleosome. , 2001, Biochimie.
[36] K. Decanniere,et al. Crystal structures of recombinant histones HMfA and HMfB from the hyperthermophilic archaeon Methanothermus fervidus. , 2000, Journal of molecular biology.
[37] J. Widom,et al. Archaeal histone selection of nucleosome positioning sequences and the procaryotic origin of histone-dependent genome evolution. , 2000, Journal of molecular biology.
[38] J. Reeve,et al. Mutational analysis of archaeal histone-DNA interactions. , 2000, Journal of molecular biology.
[39] T. Richmond,et al. The histone tails of the nucleosome. , 1998, Current opinion in genetics & development.
[40] J. Widom,et al. New DNA sequence rules for high affinity binding to histone octamer and sequence-directed nucleosome positioning. , 1998, Journal of molecular biology.
[41] T. Richmond,et al. Crystal structure of the nucleosome core particle at 2.8 Å resolution , 1997, Nature.
[42] M. Summers,et al. NMR structure of HMfB from the hyperthermophile, Methanothermus fervidus, confirms that this archaeal protein is a histone. , 1996, Journal of molecular biology.
[43] Wolfgang Kabsch,et al. Automatic indexing of rotation diffraction patterns , 1988 .
[44] Uma M. Muthurajan,et al. In Vitro Chromatin Assembly: Strategies and Quality Control. , 2016, Methods in enzymology.
[45] Alexei Vagin,et al. Molecular replacement with MOLREP. , 2010, Acta crystallographica. Section D, Biological crystallography.
[46] P. Evans,et al. Scaling and assessment of data quality. , 2006, Acta crystallographica. Section D, Biological crystallography.
[47] Uma M. Muthurajan,et al. Reconstitution of nucleosome core particles from recombinant histones and DNA. , 2004, Methods in enzymology.
[48] Roman A. Laskowski,et al. PDBsum: summaries and analyses of PDB structures , 2001, Nucleic Acids Res..