Identification of differentially expressed mRNAs and miRNAs in spermatozoa of bulls of varying fertility
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Elaine M. Dunleavy | P. Lonergan | D. Kenny | S. Fair | K. Keogh | E. Sellem | J. Perrier | E. Donnellan | M. Štiavnická | N. C. Bernecic | Caitríona M. Collins
[1] B. Lazzari,et al. A Combined Flow Cytometric Semen Analysis and miRNA Profiling as a Tool to Discriminate Between High- and Low-Fertility Bulls , 2021, Frontiers in Veterinary Science.
[2] P. Lonergan,et al. Comprehensive functional analysis reveals that acrosome integrity and viability are key variables distinguishing artificial insemination bulls of varying fertility. , 2021, Journal of dairy science.
[3] A. Kumaresan,et al. Comparative Transcriptomic Analysis of Spermatozoa From High- and Low-Fertile Crossbred Bulls: Implications for Fertility Prediction , 2021, Frontiers in Cell and Developmental Biology.
[4] P. Lonergan,et al. Plasma extracellular vesicle miRNAs as potential biomarkers of superstimulatory response in cattle , 2020, Scientific Reports.
[5] J. Morrell,et al. RNA-Seq analysis reveals functionally relevant coding and non-coding RNAs in crossbred bull spermatozoa , 2020, Animal reproduction science.
[6] Frøydis D Myromslien,et al. Differences in sperm functionality and intracellular metabolites in Norwegian Red bulls of contrasting fertility. , 2020, Theriogenology.
[7] F. Peñagaricano,et al. Integration of whole-genome DNA methylation data with RNA sequencing data to identify markers for bull fertility. , 2020, Animal genetics.
[8] L. Jouneau,et al. A comprehensive overview of bull sperm-borne small non-coding RNAs and their diversity across breeds , 2020, Epigenetics & Chromatin.
[9] Xin Wang,et al. MicroRNA expression profile analysis in sperm reveals hsa-mir-191 as an auspicious omen of in vitro fertilization , 2020, BMC Genomics.
[10] E. Menezes,et al. Sperm miR‐15a and miR‐29b are associated with bull fertility , 2020, Andrologia.
[11] F. Peñagaricano,et al. Characterization and functional roles of paternal RNAs in 2–4 cell bovine embryos , 2019, Scientific Reports.
[12] M. I. Sousa,et al. The mTOR Pathway in Reproduction: From Gonadal Function to Developmental Coordination. , 2019, Reproduction.
[13] M. E. Assumpção,et al. Sperm DNA fragmentation: causes and identification , 2019, Zygote.
[14] C. Celik-Ozenci,et al. FoxO transcription factors 1 regulate mouse preimplantation embryo development , 2019, Journal of Assisted Reproduction and Genetics.
[15] Ana Kozomara,et al. miRBase: from microRNA sequences to function , 2018, Nucleic Acids Res..
[16] N. Yang,et al. Identification and differential expression of microRNAs in the testis of chicken with high and low sperm motility. , 2018, Theriogenology.
[17] S. Eggener,et al. Region-specific microRNA signatures in the human epididymis , 2018, Asian journal of andrology.
[18] Vimlesh Kumar,et al. Transcriptional abundance of type-1 endocannabinoid receptor (CB1) and fatty acid amide hydrolase (FAAH) in bull spermatozoa: Relationship with field fertility. , 2018, Theriogenology.
[19] L. Jouneau,et al. A multi-scale analysis of bull sperm methylome revealed both species peculiarities and conserved tissue-specific features , 2018, BMC Genomics.
[20] K. Boekelheide,et al. High‐quality human and rat spermatozoal RNA isolation for functional genomic studies , 2018, Andrology.
[21] F. Morel,et al. Sperm RNA preparation for transcriptomic analysis: Review of the techniques and personal experience , 2017, Andrologia.
[22] R. Aitken. Reactive oxygen species as mediators of sperm capacitation and pathological damage , 2017, Molecular reproduction and development.
[23] H. Khatib,et al. MicroRNA Signaling in Embryo Development , 2017, Biology.
[24] J. Ravindra,et al. Spermatozoal transcripts expression levels are predictive of semen quality and conception rate in bulls (Bos taurus). , 2017, Theriogenology.
[25] M. Palladino,et al. MicroRNAs downregulated following immune activation of rat testis , 2017, American journal of reproductive immunology.
[26] Shujun Zhang,et al. Analysis of Bos taurus and Sus scrofa X and Y chromosome transcriptome highlights reproductive driver genes. , 2017, Oncotarget.
[27] J. Ravindra,et al. Occurrence and functional significance of the transcriptome in bovine (Bos taurus) spermatozoa , 2017, Scientific Reports.
[28] M. Kaproth,et al. Oligo-dT selected spermatozoal transcript profiles differ among higher and lower fertility dairy sires. , 2017, Animal reproduction science.
[29] J. Kastelic,et al. Associations of hypoosmotic swelling test, relative sperm volume shift, aquaporin7 mRNA abundance and bull fertility estimates. , 2017, Theriogenology.
[30] A. Stella,et al. Small RNA sequencing of cryopreserved semen from single bull revealed altered miRNAs and piRNAs expression between High- and Low-motile sperm populations , 2017, BMC Genomics.
[31] B. Nixon,et al. Characterisation of mouse epididymosomes reveals a complex profile of microRNAs and a potential mechanism for modification of the sperm epigenome , 2016, Scientific Reports.
[32] Wei Yan,et al. Sperm-borne miRNAs and endo-siRNAs are important for fertilization and preimplantation embryonic development , 2016, Development.
[33] L. Chevrier,et al. Use of combinations of in vitro quality assessments to predict fertility of bovine semen. , 2015, Theriogenology.
[34] J. Ravindra,et al. Spermatozoa input concentrations and RNA isolation methods on RNA yield and quality in bull (Bos taurus). , 2015, Analytical biochemistry.
[35] K. Klinga-Levan,et al. Expression of miRNAs in Bull Spermatozoa Correlates with Fertility Rates. , 2015, Reproduction in domestic animals = Zuchthygiene.
[36] D. Bartel,et al. Predicting effective microRNA target sites in mammalian mRNAs , 2015, eLife.
[37] A. Kaya,et al. Sperm Protamine-Status Correlates to the Fertility of Breeding Bulls1 , 2015, Biology of reproduction.
[38] A. Giwercman,et al. Serum miR-155 as a potential biomarker of male fertility. , 2015, Human reproduction.
[39] K. Aston,et al. Paternal influence of sperm DNA integrity on early embryonic development. , 2014, Human reproduction.
[40] Md. Munir Hossain,et al. The Expression Pattern of microRNAs in Granulosa Cells of Subordinate and Dominant Follicles during the Early Luteal Phase of the Bovine Estrous Cycle , 2014, PloS one.
[41] Paul Theodor Pyl,et al. HTSeq—a Python framework to work with high-throughput sequencing data , 2014, bioRxiv.
[42] J. Mercader,et al. New insights into the expression profile and function of micro-ribonucleic acid in human spermatozoa. , 2014, Fertility and sterility.
[43] N. Corbet,et al. Sperm protamine deficiency correlates with sperm DNA damage in Bos indicus bulls , 2014, Andrology.
[44] Björn Usadel,et al. Trimmomatic: a flexible trimmer for Illumina sequence data , 2014, Bioinform..
[45] Zongfu Cao,et al. MiR‐98 is involved in rat embryo implantation by targeting Bcl‐xl , 2014, FEBS letters.
[46] U. Singh,et al. Differential expression of protamine 1 and 2 genes in mature spermatozoa of normal and motility impaired semen producing crossbred Frieswal (HF×Sahiwal) bulls. , 2013, Research in veterinary science.
[47] J. Kastelic,et al. Associations of adiponectin and fertility estimates in Holstein bulls. , 2013, Theriogenology.
[48] M. Kaproth,et al. Cryopreserved Bovine Spermatozoal Transcript Profile as Revealed by High-Throughput Ribonucleic Acid Sequencing1 , 2013, Biology of reproduction.
[49] S. Krawetz,et al. Isolating mRNA and small noncoding RNAs from human sperm. , 2013, Methods in molecular biology.
[50] Cole Trapnell,et al. TopHat2: accurate alignment of transcriptomes in the presence of insertions, deletions and gene fusions , 2013, Genome Biology.
[51] J. Kastelic,et al. Association between mRNA abundance of functional sperm function proteins and fertility of Holstein bulls. , 2012, Theriogenology.
[52] J. Padbury,et al. Dynamics of microRNAs in bull spermatozoa , 2012, Reproductive Biology and Endocrinology.
[53] Jian Ye,et al. Primer-BLAST: A tool to design target-specific primers for polymerase chain reaction , 2012, BMC Bioinformatics.
[54] J. Dejarnette,et al. Impact of genomic selection of AI dairy sires on their likely utilization and methods to estimate fertility: a paradigm shift. , 2012, Theriogenology.
[55] P. Jagodziński,et al. Impact of protamine transcripts and their proteins on the quality and fertilization ability of sperm and the development of preimplantation embryos. , 2012, Reproductive biology.
[56] Sebastian D. Mackowiak,et al. miRDeep2 accurately identifies known and hundreds of novel microRNA genes in seven animal clades , 2011, Nucleic acids research.
[57] X. Chen,et al. Altered profile of seminal plasma microRNAs in the molecular diagnosis of male infertility. , 2011, Clinical chemistry.
[58] R. Kasimanickam,et al. Association of CRISP2, CCT8, PEBP1 mRNA abundance in sperm and sire conception rate in Holstein bulls. , 2011, Theriogenology.
[59] Marcel Martin. Cutadapt removes adapter sequences from high-throughput sequencing reads , 2011 .
[60] S. M. Chuva de Sousa Lopes,et al. The different shades of mammalian pluripotent stem cells. , 2011, Human reproduction update.
[61] L. O’Neill,et al. MicroRNAs: the fine-tuners of Toll-like receptor signalling , 2011, Nature Reviews Immunology.
[62] D. Berry,et al. Evaluation of bull fertility in dairy and beef cattle using cow field data. , 2011, Theriogenology.
[63] Antoine H. F. M. Peters,et al. Genetic vasectomy—Overexpression of Prm1‐EGFP fusion protein in elongating spermatids causes dominant male sterility in mice , 2010, Genesis.
[64] Mark D. Robinson,et al. edgeR: a Bioconductor package for differential expression analysis of digital gene expression data , 2009, Bioinform..
[65] M. Goddard,et al. Invited review: Genomic selection in dairy cattle: progress and challenges. , 2009, Journal of dairy science.
[66] Cole Trapnell,et al. Ultrafast and memory-efficient alignment of short DNA sequences to the human genome , 2009, Genome Biology.
[67] S. Krawetz,et al. The Preparation of Human Spermatozoal RNA for Clinical Analysis , 2007, Archives of andrology.
[68] P. Jagodziński,et al. Evaluation of protamines 1 and 2 transcript contents in spermatozoa from asthenozoospermic men. , 2007, Folia histochemica et cytobiologica.
[69] C. Peterson,et al. Sperm protamine 1/protamine 2 ratios are related to in vitro fertilization pregnancy rates and predictive of fertilization ability. , 2006, Fertility and sterility.
[70] D. Carrell,et al. A novel mechanism of protamine expression deregulation highlighted by abnormal protamine transcript retention in infertile human males with sperm protamine deficiency. , 2006, Molecular human reproduction.
[71] S. Lambard,et al. Analysis and significance of mRNA in human ejaculated sperm from normozoospermic donors: relationship to sperm motility and capacitation. , 2004, Molecular human reproduction.
[72] M. Virro,et al. Sperm chromatin structure assay (SCSA) parameters are related to fertilization, blastocyst development, and ongoing pregnancy in in vitro fertilization and intracytoplasmic sperm injection cycles. , 2004, Fertility and sterility.
[73] M. Nasr-Esfahani,et al. Chromomycin A3 Staining as a Useful Tool for Evaluation of Male Fertility , 2004, Journal of Assisted Reproduction and Genetics.
[74] P. Khatri,et al. Spermatozoal RNA profiles of normal fertile men , 2002, The Lancet.
[75] D. Miller,et al. Can relative spermatozoal galactosyltransferase activity be predictive of dairy bull fertility? , 2000, Journal of dairy science.
[76] D. Evenson,et al. Sperm chromatin structure assay is useful for fertility assessment. , 2000, Methods in cell science : an official journal of the Society for In Vitro Biology.
[77] Susumu Goto,et al. KEGG: Kyoto Encyclopedia of Genes and Genomes , 2000, Nucleic Acids Res..
[78] Hiroyuki Ogata,et al. KEGG: Kyoto Encyclopedia of Genes and Genomes , 1999, Nucleic Acids Res..
[79] I. Georgiou,et al. Chromomycin A3-staining as an indicator of protamine deficiency and fertilization. , 1996, International journal of andrology.
[80] R. Oliva,et al. Rapid analysis of mammalian sperm nuclear proteins. , 1993, Analytical biochemistry.