Identification of Discriminative Subnetwork from fMRI-Based Complete Functional Connectivity Networks

The comprehensive set of neuronal connections of the human brain, which is known as the human connectomes, has provided valuable insight into neurological and neurodevelopmental disorders. Functional Magnetic Resonance Imaging (fMRI) has facilitated this research by capturing regionally specific brain activity. Resting state fMRI is used to extract the functional connectivity networks, which are edge-weighted complete graphs. In these complete functional connectivity networks, each node represents one brain region or Region of Interest (ROI), and each edge weight represents the strength of functional connectivity of the adjacent ROIs. In order to leverage existing graph mining methodologies, these complete graphs are often made sparse by applying thresholds on weights. This approach can result in loss of discriminative information while addressing the issue of biomarkers detection, i.e. finding discriminative ROIs and connections, given the data of healthy and disabled population. In this work, we demonst...

[1]  Susan L. Whitfield-Gabrieli,et al.  Conn: A Functional Connectivity Toolbox for Correlated and Anticorrelated Brain Networks , 2012, Brain Connect..

[2]  Dustin Scheinost,et al.  Disruption of Functional Networks in Dyslexia: A Whole-Brain, Data-Driven Analysis of Connectivity , 2014, Biological Psychiatry.

[3]  Tamara G. Kolda,et al.  Tensor Decompositions and Applications , 2009, SIAM Rev..

[4]  Daoqiang Zhang,et al.  Integration of Network Topological and Connectivity Properties for Neuroimaging Classification , 2014, IEEE Transactions on Biomedical Engineering.

[5]  Charles J. Lynch,et al.  Salience network-based classification and prediction of symptom severity in children with autism. , 2013, JAMA psychiatry.

[6]  Daoqiang Zhang,et al.  Identification of MCI individuals using structural and functional connectivity networks , 2012, NeuroImage.

[7]  Fuhui Long,et al.  Feature selection based on mutual information criteria of max-dependency, max-relevance, and min-redundancy , 2003, IEEE Transactions on Pattern Analysis and Machine Intelligence.

[8]  Jaemin Shin,et al.  Retrospective Correction of Physiological Noise: Impact on Sensitivity, Specificity, and Reproducibility of Resting-State Functional Connectivity in a Reading Network Model , 2018, Brain Connect..

[9]  M. Kronbichler,et al.  Reading in the brain of children and adults: A meta‐analysis of 40 functional magnetic resonance imaging studies , 2015, Human brain mapping.

[10]  V. Calhoun,et al.  Temporal lobe and “default” hemodynamic brain modes discriminate between schizophrenia and bipolar disorder , 2008, Human brain mapping.

[11]  João Ricardo Sato,et al.  Abnormal Functional Resting-State Networks in ADHD: Graph Theory and Pattern Recognition Analysis of fMRI Data , 2014, BioMed research international.

[12]  R W Cox,et al.  AFNI: software for analysis and visualization of functional magnetic resonance neuroimages. , 1996, Computers and biomedical research, an international journal.

[13]  Kurt Mehlhorn,et al.  Weisfeiler-Lehman Graph Kernels , 2011, J. Mach. Learn. Res..