An environmental survey reveals hidden diversity among unicellular

The Opisthokonta clade includes Metazoa, Fungi and several unicellular lineages, such as choanoflagellates, filastereans, ichthyosporeans and nucleariids. To date, studies of the evolutionary diversity of opisthokonts have focused exclusively on metazoans, fungi and, very recently, choanoflagellates. Thus, very little is known about diversity among the filastereans, ichthyosporeans and nucleariids. To better understand the evolutionary diversity and ecology of the opisthokonts, here we analyze published environmental data from nonfungal unicellular opisthokonts and report 18S rDNA phylogenetic analyses. Our data reveal extensive diversity among all unicellular opisthokonts, except for the filastereans. We identify several clades that consist exclusively of environmental sequences, especially among ichthyosporeans and choanoflagellates. Moreover, we show that the ichthyosporeans represent a significant percentage of overall unicellular opisthokont diversity, with a greater ecological role in marine environments than previously believed. Our results provide a useful phylogenetic framework for future ecological and evolutionary studies of these poorly-known lineages. Running title: Evolutionary diversity of unicellular opisthokonts

[1]  J. Spouge,et al.  CBOL Protist Working Group: Barcoding Eukaryotic Richness beyond the Animal, Plant, and Fungal Kingdoms , 2012, PLoS biology.

[2]  J. del Campo,et al.  Unveiling Trophic Functions of Uncultured Protist Taxa by Incubation Experiments in the Brackish Baltic Sea , 2012, PloS one.

[3]  F. Nitsche,et al.  Higher Level Taxonomy and Molecular Phylogenetics of the Choanoflagellatea , 2011, The Journal of eukaryotic microbiology.

[4]  J. del Campo,et al.  Emerging diversity within chrysophytes, choanoflagellates and bicosoecids based on molecular surveys. , 2011, Protist.

[5]  M. Berbee,et al.  Facing unknowns: living cultures (Pirum gemmata gen. nov., sp. nov., and Abeoforma whisleri, gen. nov., sp. nov.) from invertebrate digestive tracts represent an undescribed clade within the unicellular Opisthokont lineage ichthyosporea (Mesomycetozoea). , 2011, Protist.

[6]  I. Ruiz-Trillo,et al.  Animals and Their Unicellular Ancestors , 2010 .

[7]  Matthew W. Brown,et al.  Phylogeny of the "forgotten" cellular slime mold, Fonticula alba, reveals a key evolutionary branch within Opisthokonta. , 2009, Molecular biology and evolution.

[8]  Martin Hartmann,et al.  Introducing mothur: Open-Source, Platform-Independent, Community-Supported Software for Describing and Comparing Microbial Communities , 2009, Applied and Environmental Microbiology.

[9]  T. Cavalier-smith Megaphylogeny, Cell Body Plans, Adaptive Zones: Causes and Timing of Eukaryote Basal Radiations 1 , 2009, The Journal of eukaryotic microbiology.

[10]  D. Scanlan,et al.  Widespread occurrence and genetic diversity of marine parasitoids belonging to Syndiniales (Alveolata). , 2008, Environmental microbiology.

[11]  S. Baldauf,et al.  Molecular phylogeny of choanoflagellates, the sister group to Metazoa , 2008, Proceedings of the National Academy of Sciences.

[12]  C. Pedrós-Alió,et al.  Unveiling new microbial eukaryotes in the surface ocean. , 2008, Current opinion in microbiology.

[13]  Kamran Shalchian-Tabrizi,et al.  Multigene Phylogeny of Choanozoa and the Origin of Animals , 2008, PloS one.

[14]  S. Baldauf,et al.  The protistan origins of animals and fungi. , 2006, Molecular biology and evolution.

[15]  T. Cavalier-smith,et al.  Phylogeny of Choanozoa, Apusozoa, and Other Protozoa and Early Eukaryote Megaevolution , 2003, Journal of Molecular Evolution.

[16]  L. Mendoza,et al.  The class mesomycetozoea: a heterogeneous group of microorganisms at the animal-fungal boundary. , 2002, Annual review of microbiology.

[17]  M. Sogin,et al.  The Nucleariid Amoebae: More Protists at the Animal-Fungal Boundary , 2001, The Journal of eukaryotic microbiology.

[18]  R. Gutell,et al.  A novel clade of protistan parasites near the animal-fungal divergence. , 1996, Proceedings of the National Academy of Sciences of the United States of America.

[19]  T. Cavalier-smith,et al.  Corallochytrium, an enigmatic non-flagellate protozoan related to choanoflagellates , 1996 .

[20]  S. Raghu-kumar Occurrence of the Thraustochytrid, Corallochytrium limacisporum gen. et sp. nov. in the Coral Reef Lagoons of the Lakshadweep Islands in the Arabian Sea , 1987 .