Applicability of the EFSA Opinion on site‐directed nucleases type 3 for the safety assessment of plants developed using site‐directed nucleases type 1 and 2 and oligonucleotide‐directed mutagenesis
暂无分享,去创建一个
H. Naegeli | L. Firbank | F. Veronesi | K. Paraskevopoulos | E. Mullins | J. Casacuberta | T. Dalmay | J. Bresson | I. Dewhurst | M. Epstein | P. Guerche | J. Hejátko | F. J. Moreno | F. Nogué | N. Rostoks | J. J. Sánchez Serrano | G. Savoini | E. Veromann | Tommaso Raffaello | A. Gennaro
[1] Christoph Then,et al. Broadening the GMO risk assessment in the EU for genome editing technologies in agriculture , 2020, Environmental Sciences Europe.
[2] Shadma Afzal,et al. A review of CRISPR associated genome engineering: application, advances and future prospects of genome targeting tool for crop improvement , 2020, Biotechnology Letters.
[3] A. Alok,et al. The present and potential future methods for delivering CRISPR/Cas9 components in plants , 2020, Journal of Genetic Engineering and Biotechnology.
[4] Baohong Zhang. CRISPR/Cas9: A Robust Genome-Editing Tool with Versatile Functions and Endless Application , 2020, International journal of molecular sciences.
[5] Saman Majeed,et al. Latest Developed Strategies to Minimize the Off-Target Effects in CRISPR-Cas-Mediated Genome Editing , 2020, Cells.
[6] F. Nogué,et al. CRISPR-induced indels and base editing using the Staphylococcus aureus Cas9 in potato , 2020, bioRxiv.
[7] David R. Liu,et al. Genome editing with CRISPR–Cas nucleases, base editors, transposases and prime editors , 2020, Nature Biotechnology.
[8] Xueqin Lv,et al. Development of a DNA double-strand break-free base editing tool in Corynebacterium glutamicum for genome editing and metabolic engineering , 2020, Metabolic engineering communications.
[9] K. Glenn,et al. The role of conventional plant breeding in ensuring safe levels of naturally occurring toxins in food crops , 2020 .
[10] M. Dichgans,et al. Detection of Deleterious On-Target Effects after HDR-Mediated CRISPR Editing. , 2020, Cell reports.
[11] G. May,et al. Plant Genome Editing and the Relevance of Off-Target Changes1[OPEN] , 2020, Plant Physiology.
[12] Andreas Houben,et al. CRISPR–Cas9-mediated induction of heritable chromosomal translocations in Arabidopsis , 2020, Nature Plants.
[13] B. Wynne,et al. GMO regulations and their interpretation: how EFSA’s guidance on risk assessments of GMOs is bound to fail , 2020, Environmental Sciences Europe.
[14] G. Shao,et al. Base Editing: The Ever Expanding Clustered Regularly Interspaced Short Palindromic Repeats (CRISPR) Tool Kit for Precise Genome Editing in Plants , 2020, Genes.
[15] David R. Liu,et al. Prime genome editing in rice and wheat , 2020, Nature Biotechnology.
[16] Dipali G. Sashital,et al. CRISPR-Cas12a has widespread off-target and dsDNA-nicking effects , 2020, The Journal of Biological Chemistry.
[17] Christoph Then,et al. Risk assessment of genetically engineered plants that can persist and propagate in the environment , 2020, Environmental Sciences Europe.
[18] SpCas9-NG self-targets the sgRNA sequence in plant genome editing , 2020, Nature Plants.
[19] R. Stupar,et al. Integration, abundance, and transmission of mutations and transgenes in a series of CRISPR/Cas9 soybean lines , 2020, BMC Biotechnology.
[20] Yuri B Schwartz,et al. Pervasive head-to-tail insertions of DNA templates mask desired CRISPR-Cas9–mediated genome editing events , 2020, Science Advances.
[21] Steven M. Solomon. Genome editing in animals: why FDA regulation matters , 2020, Nature Biotechnology.
[22] Tingting Wu,et al. Natural variation and CRISPR/Cas9‐mediated mutation in GmPRR37 affect photoperiodic flowering and contribute to regional adaptation of soybean , 2020, Plant biotechnology journal.
[23] Alisdair R Fernie,et al. Metabolomics should be deployed in identification and characterization of gene-edited crops. , 2020, The Plant journal : for cell and molecular biology.
[24] David R. Liu,et al. Evaluation and minimization of Cas9-independent off-target DNA editing by cytosine base editors , 2020, Nature Biotechnology.
[25] C. Collonnier,et al. The Judgment of the CJEU of 25 July 2018 on Mutagenesis: Interpretation and Interim Legislative Proposal , 2020, Frontiers in Plant Science.
[26] E. Kmiec,et al. Understanding the diversity of genetic outcomes from CRISPR-Cas generated homology-directed repair , 2019, Communications Biology.
[27] Deyue Yu,et al. Multiplex CRISPR/Cas9‐mediated metabolic engineering increases soya bean isoflavone content and resistance to soya bean mosaic virus , 2019, Plant biotechnology journal.
[28] S. Sriram,et al. Genome editing in wheat microspores and haploid embryos mediated by delivery of ZFN proteins and cell‐penetrating peptide complexes , 2019, Plant biotechnology journal.
[29] Min Kyu Kim,et al. Retroelement Insertion in a CRISPR/Cas9 Editing Site in the Early Embryo Intensifies Genetic Mosaicism , 2019, Front. Cell Dev. Biol..
[30] David R. Liu,et al. Search-and-replace genome editing without double-strand breaks or donor DNA , 2019, Nature.
[31] Mickael Malnoy,et al. Reduced fire blight susceptibility in apple cultivars using a high‐efficiency CRISPR/Cas9‐FLP/FRT‐based gene editing system , 2019, Plant biotechnology journal.
[32] CRISPR-Cas9-based mutagenesis frequently provokes on-target mRNA misregulation , 2019, Nature Communications.
[33] W. Terzaghi,et al. Knockout of two BnaMAX1 homologs by CRISPR/Cas9‐targeted mutagenesis improves plant architecture and increases yield in rapeseed (Brassica napus L.) , 2019, Plant biotechnology journal.
[34] Baohui Liu,et al. Perspectives on the application of genome editing technologies in crop breeding. , 2019, Molecular plant.
[35] Hui Wei,et al. Strategies to Increase On-Target and Reduce Off-Target Effects of the CRISPR/Cas9 System in Plants , 2019, International journal of molecular sciences.
[36] Daniel A. Tadesse,et al. Template plasmid integration in germline genome-edited cattle , 2019, Nature Biotechnology.
[37] Wolfgang Huber,et al. Biological plasticity rescues target activity in CRISPR knock outs , 2019, Nature Methods.
[38] Jeffrey D Wolt. Current risk assessment approaches for environmental and food and feed safety assessment , 2019, Transgenic Research.
[39] Simon Sretenovic,et al. The emerging and uncultivated potential of CRISPR technology in plant science , 2019, Nature Plants.
[40] Stéphane Deschamps,et al. CRISPR-Cas9 Editing in Maize: Systematic Evaluation of Off-target Activity and Its Relevance in Crop Improvement , 2019, Scientific Reports.
[41] Yanpeng Wang,et al. CRISPR/Cas Genome Editing and Precision Plant Breeding in Agriculture. , 2019, Annual review of plant biology.
[42] Katharina Kawall. New Possibilities on the Horizon: Genome Editing Makes the Whole Genome Accessible for Changes , 2019, Front. Plant Sci..
[43] M. Eckerstorfer,et al. An EU Perspective on Biosafety Considerations for Plants Developed by Genome Editing and Other New Genetic Modification Techniques (nGMs) , 2019, Front. Bioeng. Biotechnol..
[44] Q. Gao,et al. Cytosine, but not adenine, base editors induce genome-wide off-target mutations in rice , 2019, Science.
[45] L. Steinmetz,et al. Cytosine base editor generates substantial off-target single-nucleotide variants in mouse embryos , 2019, Science.
[46] J. Kanno,et al. Exosome-mediated horizontal gene transfer occurs in double-strand break repair during genome editing , 2019, Communications Biology.
[47] E. Vergne,et al. Efficient Targeted Mutagenesis in Apple and First Time Edition of Pear Using the CRISPR-Cas9 System , 2019, Front. Plant Sci..
[48] G. Davis,et al. Improving CRISPR-Cas9 Genome Editing Efficiency by Fusion with Chromatin-Modulating Peptides. , 2019, The CRISPR journal.
[49] Nan Wu,et al. CRISPR-Cas9 mediated targeted disruption of FAD2–2 microsomal omega-6 desaturase in soybean (Glycine max.L) , 2019, BMC Biotechnology.
[50] T. Sprink,et al. DNA-Free Genome Editing: Past, Present and Future , 2019, Front. Plant Sci..
[51] C. Kohl,et al. What is the available evidence for the range of applications of genome-editing as a new tool for plant trait modification and the potential occurrence of associated off-target effects: a systematic map , 2018, Environmental Evidence.
[52] Jie Zhang,et al. Whole genome sequencing reveals rare off‐target mutations and considerable inherent genetic or/and somaclonal variations in CRISPR/Cas9‐edited cotton plants , 2018, Plant biotechnology journal.
[53] K. Dorn,et al. Molecular tools enabling pennycress (Thlaspi arvense) as a model plant and oilseed cash cover crop , 2018, Plant biotechnology journal.
[54] R. Solano,et al. Design of a bacterial speck resistant tomato by CRISPR/Cas9‐mediated editing of SlJAZ2 , 2018, Plant biotechnology journal.
[55] Justin P Sandoval,et al. The complex architecture and epigenomic impact of plant T-DNA insertions , 2019, PLoS genetics.
[56] Martin J. Aryee,et al. Activities and specificities of CRISPR/Cas9 and Cas12a nucleases for targeted mutagenesis in maize , 2018, Plant biotechnology journal.
[57] M. Causse,et al. Trait discovery and editing in tomato , 2018, The Plant journal : for cell and molecular biology.
[58] Michael J. Bernstein,et al. Revisiting Risk Governance of GM Plants: The Need to Consider New and Emerging Gene-Editing Techniques , 2018, Front. Plant Sci..
[59] P. Hofvander,et al. Genome editing in potato via CRISPR-Cas9 ribonucleoprotein delivery. , 2018, Physiologia plantarum.
[60] Caixia Gao,et al. Applications and potential of genome editing in crop improvement , 2018, Genome Biology.
[61] R. Eils,et al. Cell-specific CRISPR/Cas9 activation by microRNA-dependent expression of anti-CRISPR proteins , 2018, bioRxiv.
[62] Vladimir Nekrasov,et al. CRISPR/Cas precision: do we need to worry about off-targeting in plants? , 2018, Plant Cell Reports.
[63] Qian-Hao Zhu,et al. Highly Efficient Targeted Gene Editing in Upland Cotton Using the CRISPR/Cas9 System , 2018, International journal of molecular sciences.
[64] D. Voytas,et al. De novo domestication of wild tomato using genome editing , 2018, Nature Biotechnology.
[65] G. Kleter,et al. EU court casts new plant breeding techniques into regulatory limbo , 2018, Nature Biotechnology.
[66] Yi Zheng,et al. Recognition of CRISPR/Cas9 off‐target sites through ensemble learning of uneven mismatch distributions , 2018, Bioinform..
[67] Xiang Ding,et al. CRISPR/Cas9 Assisted Multiplex Genome Editing Technique in Escherichia coli. , 2018, Biotechnology journal.
[68] Martin J. Aryee,et al. In vivo CRISPR editing with no detectable genome-wide off-target mutations , 2018, Nature.
[69] A. Bradley,et al. Repair of double-strand breaks induced by CRISPR–Cas9 leads to large deletions and complex rearrangements , 2018, Nature Biotechnology.
[70] G. Kleter,et al. The European Union Court's Advocate General's Opinion and new plant breeding techniques , 2018, Nature Biotechnology.
[71] Tao Zhang,et al. A large-scale whole-genome sequencing analysis reveals highly specific genome editing by both Cas9 and Cpf1 (Cas12a) nucleases in rice , 2018, Genome Biology.
[72] Beate Wittbrodt,et al. Efficient single-copy HDR by 5’ modified long dsDNA donors , 2018, bioRxiv.
[73] W. Parrott,et al. Novel Features and Considerations for ERA and Regulation of Crops Produced by Genome Editing , 2018, Front. Bioeng. Biotechnol..
[74] Waseem Akhtar,et al. Kinetics and Fidelity of the Repair of Cas9-Induced Double-Strand DNA Breaks , 2018, Molecular cell.
[75] Yunbo Luo,et al. CRISPR/Cas9‐mediated mutagenesis of lncRNA1459 alters tomato fruit ripening , 2018, The Plant journal : for cell and molecular biology.
[76] L. Tian,et al. A large-scale whole-genome sequencing analysis reveals highly specific genome editing by both Cas9 and Cpf1 nucleases in rice , 2018, bioRxiv.
[77] Daniel F. Voytas,et al. Low‐gluten, nontransgenic wheat engineered with CRISPR/Cas9 , 2017, Plant biotechnology journal.
[78] Sun‐mi Lee,et al. TALEN‐mediated targeted mutagenesis of more than 100 COMT copies/alleles in highly polyploid sugarcane improves saccharification efficiency without compromising biomass yield , 2017, Plant biotechnology journal.
[79] Yunbo Luo,et al. Multiplexed CRISPR/Cas9‐mediated metabolic engineering of γ‐aminobutyric acid levels in Solanum lycopersicum , 2017, Plant biotechnology journal.
[80] A. Anand,et al. Advancing Agrobacterium-Based Crop Transformation and Genome Modification Technology for Agricultural Biotechnology. , 2018, Current topics in microbiology and immunology.
[81] Jeffrey D Wolt,et al. Risk associated with off-target plant genome editing and methods for its limitation , 2017, Emerging topics in life sciences.
[82] F. Meng,et al. Genome editing in potato plants by agrobacterium-mediated transient expression of transcription activator-like effector nucleases , 2017, Plant Biotechnology Reports.
[83] Deniz M. Ozata,et al. CRISPR/Cas9-mediated genome editing induces exon skipping by alternative splicing or exon deletion , 2017, Genome Biology.
[84] T. Cooper,et al. Unexpected consequences: exon skipping caused by CRISPR-generated mutations , 2017, Genome Biology.
[85] Adam Lavertu,et al. Frameshift indels introduced by genome editing can lead to in-frame exon skipping , 2017, PloS one.
[86] Leslie S. Edwards,et al. Mapping the genomic landscape of CRISPR–Cas9 cleavage , 2017, Nature Methods.
[87] C. Jung,et al. CRISPR-Cas9 Targeted Mutagenesis Leads to Simultaneous Modification of Different Homoeologous Gene Copies in Polyploid Oilseed Rape (Brassica napus)1 , 2017, Plant Physiology.
[88] Jian Li,et al. Rapid generation of genetic diversity by multiplex CRISPR/Cas9 genome editing in rice , 2017, Science China Life Sciences.
[89] Beum-Chang Kang,et al. CRISPR/Cpf1-mediated DNA-free plant genome editing , 2017, Nature Communications.
[90] A. Archibald,et al. Precision engineering for PRRSV resistance in pigs: Macrophages from genome edited pigs lacking CD163 SRCR5 domain are fully resistant to both PRRSV genotypes while maintaining biological function , 2017, PLoS pathogens.
[91] Yanpeng Wang,et al. Efficient DNA-free genome editing of bread wheat using CRISPR/Cas9 ribonucleoprotein complexes , 2017, Nature Communications.
[92] David R. Liu,et al. CRISPR-Based Technologies for the Manipulation of Eukaryotic Genomes , 2017, Cell.
[93] E. Cahoon,et al. Significant enhancement of fatty acid composition in seeds of the allohexaploid, Camelina sativa, using CRISPR/Cas9 gene editing , 2017, Plant biotechnology journal.
[94] E. M. DeGennaro,et al. Multiplex gene editing by CRISPR-Cpf1 through autonomous processing of a single crRNA array , 2016, Nature Biotechnology.
[95] Rainer Fischer,et al. Characteristics of Genome Editing Mutations in Cereal Crops. , 2017, Trends in plant science.
[96] David R. Liu,et al. CRISPR-Based Technologies for the Manipulation of Eukaryotic Genomes , 2017, Cell.
[97] M. Ward,et al. An integrated multi-omics analysis of the NK603 Roundup-tolerant GM maize reveals metabolism disturbances caused by the transformation process , 2016, Scientific Reports.
[98] A. Banning,et al. Random Splicing of Several Exons Caused by a Single Base Change in the Target Exon of CRISPR/Cas9 Mediated Gene Knockout , 2016, Cells.
[99] Joshua K Young,et al. Genome editing in maize directed by CRISPR–Cas9 ribonucleoprotein complexes , 2016, Nature Communications.
[100] Dipali G. Sashital,et al. Achieving Plant CRISPR Targeting that Limits Off‐Target Effects , 2016, The plant genome.
[101] Yi Zhang,et al. Efficient and transgene-free genome editing in wheat through transient expression of CRISPR/Cas9 DNA or RNA , 2016, Nature Communications.
[102] D. Voytas,et al. Geminivirus-Mediated Genome Editing in Potato (Solanum tuberosum L.) Using Sequence-Specific Nucleases , 2016, Front. Plant Sci..
[103] David R. Liu,et al. Programmable editing of a target base in genomic DNA without double-stranded DNA cleavage , 2016, Nature.
[104] G. Lin,et al. Potential pitfalls of CRISPR/Cas9‐mediated genome editing , 2016, The FEBS journal.
[105] N. Patron,et al. Multi-gene engineering in plants with RNA-guided Cas9 nuclease. , 2016, Current opinion in biotechnology.
[106] J. Mozoruk,et al. Oligonucleotide‐directed mutagenesis for precision gene editing , 2015, Plant biotechnology journal.
[107] Feng Zhang,et al. Improving cold storage and processing traits in potato through targeted gene knockout. , 2016, Plant biotechnology journal.
[108] Soon Il Kwon,et al. DNA-free genome editing in plants with preassembled CRISPR-Cas9 ribonucleoproteins , 2015, Nature Biotechnology.
[109] D. Voytas,et al. Non-transgenic Plant Genome Editing Using Purified Sequence-Specific Nucleases. , 2015, Molecular plant.
[110] S. Krimsky. An Illusory Consensus behind GMO Health Assessment , 2015 .
[111] Daniel F Voytas,et al. Efficient Virus-Mediated Genome Editing in Plants Using the CRISPR/Cas9 System. , 2015, Molecular plant.
[112] Robert J. Schmitz,et al. Targeted genome modifications in soybean with CRISPR/Cas9 , 2015, BMC Biotechnology.
[113] Fern Wickson,et al. No scientific consensus on GMO safety , 2015, Environmental Sciences Europe.
[114] Martin J. Aryee,et al. GUIDE-Seq enables genome-wide profiling of off-target cleavage by CRISPR-Cas nucleases , 2014, Nature Biotechnology.
[115] P. Beetham,et al. Oligo-Mediated Targeted Gene Editing , 2015 .
[116] H. Puchta,et al. Advances in New Technology for Targeted Modification of Plant Genomes , 2015, Springer New York.
[117] J. Doudna,et al. The new frontier of genome engineering with CRISPR-Cas9 , 2014, Science.
[118] F. Zhang,et al. Improved soybean oil quality by targeted mutagenesis of the fatty acid desaturase 2 gene family. , 2014, Plant biotechnology journal.
[119] Kang Zhang,et al. Targeted mutagenesis in Zea mays using TALENs and the CRISPR/Cas system. , 2014, Journal of genetics and genomics = Yi chuan xue bao.
[120] Jin-Soo Kim,et al. Cas-OFFinder: a fast and versatile algorithm that searches for potential off-target sites of Cas9 RNA-guided endonucleases , 2014, Bioinform..
[121] R. Tuli,et al. RNA-Guided Genome Editing for Target Gene Mutations in Wheat , 2013, G3: Genes, Genomes, Genetics.
[122] Eli J. Fine,et al. DNA targeting specificity of RNA-guided Cas9 nucleases , 2013, Nature Biotechnology.
[123] Bing Yang,et al. Demonstration of CRISPR/Cas9/sgRNA-mediated targeted gene modification in Arabidopsis, tobacco, sorghum and rice , 2013, Nucleic acids research.
[124] David R. Liu,et al. High-throughput profiling of off-target DNA cleavage reveals RNA-programmed Cas9 nuclease specificity , 2013, Nature Biotechnology.
[125] Detlef Weigel,et al. Targeted mutagenesis in the model plant Nicotiana benthamiana using Cas9 RNA-guided endonuclease , 2013, Nature Biotechnology.
[126] George M. Church,et al. Multiplex and homologous recombination–mediated genome editing in Arabidopsis and Nicotiana benthamiana using guide RNA and Cas9 , 2013, Nature Biotechnology.
[127] J. Casacuberta,et al. Site-directed nucleases: a paradigm shift in predictable, knowledge-based plant breeding. , 2013, Trends in biotechnology.
[128] A. Chesson,et al. Scientific opinion addressing the safety assessment of plants developed using Zinc Finger Nuclease 3 and other site-directed Nucleases with similar function , 2012 .
[129] J. Doudna,et al. A Programmable Dual-RNA–Guided DNA Endonuclease in Adaptive Bacterial Immunity , 2012, Science.
[130] E. Kmiec,et al. DNA Damage Response Pathway and Replication Fork Stress During Oligonucleotide Directed Gene Editing , 2012, Molecular therapy. Nucleic acids.
[131] Antoine Messéan,et al. Scientific opinion addressing the safety assessment of plants developed through cisgenesis and intragenesis , 2012 .
[132] Dennis J. Gray,et al. Genetic engineering technologies , 2011 .
[133] H. Kuiper,et al. Guidance for risk assessment of food and feed from genetically modified plants , 2011 .
[134] Efsa Publication,et al. EFSA Panel on Genetically Modified Organisms (GMO); Draft Scientific Opinion on the assessment of allergenicity of GM plants and microorganisms and derived food and feed , 2010 .
[135] Jan G. Schaart,et al. Traditional plant breeding methods , 2010 .
[136] Antoine Messéan,et al. Guidance on the environmental risk assessment of genetically modified plants , 2010 .
[137] S. Krauss,et al. Cellular responses to targeted genomic sequence modification using single-stranded oligonucleotides and zinc-finger nucleases. , 2009, DNA repair.
[138] Allison K. Wilson,et al. The Mutational Consequences of Plant Transformation , 2006, Journal of biomedicine & biotechnology.
[139] P. Sharp,et al. Oligonucleotide-directed gene repair in wheat using a transient plasmid gene repair assay system , 2006, Plant Cell Reports.
[140] B. Linke,et al. Detection of RNA variants transcribed from the transgene in Roundup Ready soybean , 2005 .
[141] K. Toriyama,et al. Chimeric RNA/DNA oligonucleotide-directed gene targeting in rice , 2004, Plant Cell Reports.
[142] Hong-Gyu Kang,et al. Transgene structures in T-DNA-inserted rice plants , 2003, Plant Molecular Biology.
[143] Daniel Schubert,et al. A comprehensive characterization of single-copy T-DNA insertions in the Arabidopsis thaliana genome , 2003, Plant Molecular Biology.
[144] D. Somers,et al. Complete sequence analysis of transgene loci from plants transformed via microprojectile bombardment , 2003, Plant Molecular Biology.
[145] Marc De Loose,et al. T-DNA Integration in Arabidopsis Chromosomes. Presence and Origin of Filler DNA Sequences1[w] , 2003, Plant Physiology.
[146] S. Diamond,et al. Oligonucleotide-directed single-base DNA alterations in mouse embryonic stem cells , 2003, Gene Therapy.
[147] D. J. Peterson,et al. Engineering herbicide-resistant maize using chimeric RNA/DNA oligonucleotides , 2000, Nature Biotechnology.
[148] G. May,et al. A tool for functional plant genomics: chimeric RNA/DNA oligonucleotides cause in vivo gene-specific mutations. , 1999, Proceedings of the National Academy of Sciences of the United States of America.
[149] V. Alexeev,et al. Stable and inheritable changes in genotype and phenotype of albino melanocytes induced by an RNA-DNA oligonucleotide , 1998, Nature Biotechnology.
[150] M. Rice,et al. Correction of the Mutation Responsible for Sickle Cell Anemia by an RNA-DNA Oligonucleotide , 1996, Science.