Chitosan Hydrogel-Delivered ABE8e Corrects PAX9 Mutant in Dental Pulp Stem Cells

Hypodontia (dental agenesis) is a genetic disorder, and it has been identified that the mutation C175T in PAX9 could lead to hypodontia. Cas9 nickase (nCas9)-mediated homology-directed repair (HDR) and base editing were used for the correction of this mutated point. This study aimed to investigate the effect of HDR and the base editor ABE8e in editing PAX9 mutant. It was found that the chitosan hydrogel was efficient in delivering naked DNA into dental pulp stem cells (DPSCs). To explore the influence of the C175T mutation in PAX9 on the proliferation of DPSCs, hydrogel was employed to deliver PAX9 mutant vector into DPSCs, finding that the PAX9-containing C175T mutation failed to promote the proliferation of DPSCs. Firstly, DPSCs stably carrying PAX9 mutant were constructed. Either an HDR or ABE8e system was delivered into the above-mentioned stable DPSCs, and then the correction efficiency using Sanger sequencing and Western blotting was determined. Meanwhile, the ABE8e presented significantly higher efficiency in correcting C175T compared with HDR. Furthermore, the corrected PAX9 presented enhanced viability and differentiation capacity for osteogenic and neurogenic lineages; the corrected PAX9 even possessed extremely enhanced transcriptional activation ability. In summary, this study has powerful implications for studies into base editors, chitosan hydrogel, and DPSCs in treating hypodontia.

[1]  S. A,et al.  Chitosan-Based Hydrogels for Infected Wound Treatment. , 2023, Macromolecular bioscience.

[2]  Nagavendra Kommineni,et al.  Chitosan: A Potential Biopolymer in Drug Delivery and Biomedical Applications , 2023, Pharmaceutics.

[3]  Yuanjin Zhao,et al.  Biomimetic Enzyme Cascade Structural Color Hydrogel Microparticles for Diabetic Wound Healing Management , 2023, Advancement of science.

[4]  J. Conde,et al.  Hydrogels for RNA delivery , 2023, Nature Materials.

[5]  Qingwen Wang,et al.  An Integrally Formed Janus Hydrogel for Robust Wet‐Tissue Adhesive and Anti‐Postoperative Adhesion , 2023, Advanced materials.

[6]  Qiuhui Qian,et al.  Recent advances in hydrogels for preventing tumor recurrence. , 2023, Biomaterials Science.

[7]  Wei Zhang,et al.  Smart stimuli-responsive injectable gels and hydrogels for drug delivery and tissue engineering applications: A review , 2023, Frontiers in Bioengineering and Biotechnology.

[8]  X. Qu,et al.  Injectable Double-Network Hydrogel-Based Three-Dimensional Cell Culture Systems for Regenerating Dental Pulp. , 2023, ACS applied materials & interfaces.

[9]  X. Zhao,et al.  Recent progress of antibacterial hydrogels in wound dressings , 2023, Materials today. Bio.

[10]  Shengwen Liu,et al.  Injectable hydrogel encapsulated with VEGF-mimetic peptide-loaded nanoliposomes promotes peripheral nerve repair in vivo. , 2023, Acta biomaterialia.

[11]  Xiaogang Wang,et al.  Tooth number abnormality: from bench to bedside , 2023, International Journal of Oral Science.

[12]  Sagar Pal,et al.  Chemical modification of β-cyclodextrin towards hydrogel formation. , 2023, Carbohydrate polymers.

[13]  Xiaoyan Xie,et al.  Extracellular vesicle-loaded hydrogels for tissue repair and regeneration , 2022, Materials today. Bio.

[14]  Zhiqun Lin,et al.  Recent advances in conductive hydrogels: classifications, properties, and applications. , 2022, Chemical Society reviews.

[15]  Arash Khorrami Jahromi,et al.  Advances in the Translation of Electrochemical Hydrogel‐Based Sensors , 2022, Advanced healthcare materials.

[16]  Qingsong Ye,et al.  A shear-thinning, ROS-scavenging hydrogel combined with dental pulp stem cells promotes spinal cord repair by inhibiting ferroptosis , 2022, Bioactive materials.

[17]  L. Manning,et al.  Chitin and chitosan derived from crustacean waste valorization streams can support food systems and the UN Sustainable Development Goals , 2022, Nature Food.

[18]  Chen Zhang,et al.  Ti3C2TxMXene Composite 3D Hydrogel Potentiates mTOR Signaling to Promote the Generation of Functional Hair Cells in Cochlea Organoids , 2022, Advanced science.

[19]  E. Polycarpou,et al.  Advances in Chitosan-Based CRISPR/Cas9 Delivery Systems , 2022, Pharmaceutics.

[20]  D. Mooney,et al.  Self-Healing Injectable Hydrogels for Tissue Regeneration , 2022, Chemical reviews.

[21]  Yujie Ji,et al.  MicroRNA-29b/graphene oxide–polyethyleneglycol–polyethylenimine complex incorporated within chitosan hydrogel promotes osteogenesis , 2022, Frontiers in Chemistry.

[22]  Yuanjin Zhao,et al.  Bio-inspired natural platelet hydrogels for wound healing. , 2022, Science bulletin.

[23]  Ying Bai,et al.  Dual-crosslinked regenerative hydrogel for sutureless long-term repair of corneal defect , 2022, Bioactive materials.

[24]  A. Lavrov,et al.  Improving Homology-Directed Repair in Genome Editing Experiments by Influencing the Cell Cycle , 2022, International journal of molecular sciences.

[25]  K. H. Kwack,et al.  Clinical Potential of Dental Pulp Stem Cells in Pulp Regeneration: Current Endodontic Progress and Future Perspectives , 2022, Frontiers in Cell and Developmental Biology.

[26]  N. Arfian,et al.  BMPR2 Editing in Fibroblast NIH3T3 using CRISPR/Cas9 Affecting BMPR2 mRNA Expression and Proliferation , 2022, The Indonesian Biomedical Journal.

[27]  V. Greco,et al.  From start to finish—a molecular link in wound repair , 2022, Science.

[28]  Shu‐Hong Yu,et al.  Anti‐Swelling, Robust, and Adhesive Extracellular Matrix‐Mimicking Hydrogel Used as Intraoral Dressing , 2022, Advanced materials.

[29]  E. Calabrese,et al.  Human dental pulp stem cells and hormesis , 2021, Ageing Research Reviews.

[30]  C. Dunbar,et al.  Understanding and Overcoming Adverse Consequences of Genome Editing on Hematopoietic Stem and Progenitor Cells. , 2021, Molecular therapy : the journal of the American Society of Gene Therapy.

[31]  Xiao Han,et al.  Multicellular Spheroids Formation on Hydrogel Enhances Osteogenic/Odontogenic Differentiation of Dental Pulp Stem Cells Under Magnetic Nanoparticles Induction , 2021, International journal of nanomedicine.

[32]  G. Puras,et al.  How Far Are Non-Viral Vectors to Come of Age and Reach Clinical Translation in Gene Therapy? , 2021, International journal of molecular sciences.

[33]  Qian Feng,et al.  Structurally Dynamic Hydrogels for Biomedical Applications: Pursuing a Fine Balance between Macroscopic Stability and Microscopic Dynamics. , 2021, Chemical reviews.

[34]  Weilin Wang,et al.  Mesenchymal Stem Cells Engineered by Nonviral Vectors: A Powerful Tool in Cancer Gene Therapy , 2021, Pharmaceutics.

[35]  M. Rajabi,et al.  Chitosan hydrogels in 3D printing for biomedical applications. , 2021, Carbohydrate polymers.

[36]  Chengfei Zhang,et al.  DPSCs treated by TGF-β1 regulate angiogenic sprouting of three-dimensionally co-cultured HUVECs and DPSCs through VEGF-Ang-Tie2 signaling , 2021, Stem cell research & therapy.

[37]  B. B. Sahu,et al.  The clinical significance and correlative signaling pathways of paired box gene 9 in development and carcinogenesis. , 2021, Biochimica et biophysica acta. Reviews on cancer.

[38]  Walker S. Lahr,et al.  CRISPR-Cas9 cytidine and adenosine base editing of splice-sites mediates highly-efficient disruption of proteins in primary and immortalized cells , 2021, Nature Communications.

[39]  F. Santilli,et al.  Regenerative Potential of DPSCs and Revascularization: Direct, Paracrine or Autocrine Effect? , 2021, Stem Cell Reviews and Reports.

[40]  I. Căruntu,et al.  Recent Biomedical Approaches for Chitosan Based Materials as Drug Delivery Nanocarriers , 2021, Pharmaceutics.

[41]  Hua Zhou,et al.  Strong tough hydrogels via the synergy of freeze-casting and salting out , 2021, Nature.

[42]  M. Nakashima,et al.  Characterization of stable hypoxia-preconditioned dental pulp stem cells compared with mobilized dental pulp stem cells for application for pulp regenerative therapy , 2021, Stem cell research & therapy.

[43]  D. Ramotar,et al.  CRISPR FokI Dead Cas9 System: Principles and Applications in Genome Engineering , 2020, Cells.

[44]  R. Jain,et al.  Efficiency of Chitosan-Coated PLGA Nanocarriers for Cellular Delivery of siRNA and CRISPR/Cas9 Complex , 2020, Journal of Pharmaceutical Innovation.

[45]  David R. Liu,et al.  DNA capture by a CRISPR-Cas9–guided adenine base editor , 2020, Science.

[46]  Yoichi Yamada,et al.  Clinical Potential and Current Progress of Dental Pulp Stem Cells for Various Systemic Diseases in Regenerative Medicine: A Concise Review , 2019, International journal of molecular sciences.

[47]  D. Liang,et al.  Paired CRISPR/Cas9 Nickases Mediate Efficient Site-Specific Integration of F9 into rDNA Locus of Mouse ESCs , 2018, International journal of molecular sciences.

[48]  Hairui Zhang,et al.  PEGylated Chitosan for Nonviral Aerosol and Mucosal Delivery of the CRISPR/Cas9 System in Vitro. , 2018, Molecular pharmaceutics.

[49]  P. Meyers,et al.  Multisociety Consensus Quality Improvement Revised Consensus Statement for Endovascular Therapy of Acute Ischemic Stroke , 2018, American Journal of Neuroradiology.

[50]  Z. Izsvák,et al.  Efficient Non-viral Gene Delivery into Human Hematopoietic Stem Cells by Minicircle Sleeping Beauty Transposon Vectors , 2018, Molecular therapy : the journal of the American Society of Gene Therapy.

[51]  Alessander Leyendecker Junior,et al.  The use of human dental pulp stem cells for in vivo bone tissue engineering: A systematic review , 2018, Journal of tissue engineering.

[52]  Max Shtein,et al.  An electric-eel-inspired soft power source from stacked hydrogels , 2017, Nature.

[53]  Nicole M. Gaudelli,et al.  Programmable base editing of A•T to G•C in genomic DNA without DNA cleavage , 2017, Nature.

[54]  B. Pützer,et al.  Advances in cancer stem cell targeting: How to strike the evil at its root , 2017, Advanced drug delivery reviews.

[55]  A. Kondo,et al.  Targeted nucleotide editing using hybrid prokaryotic and vertebrate adaptive immune systems , 2016, Science.

[56]  L. Ni,et al.  The Regulatory Effects of Long Noncoding RNA-ANCR on Dental Tissue-Derived Stem Cells , 2016, Stem cells international.

[57]  Dongqin Quan,et al.  Anti-inflammatory activity of chitosan nanoparticles carrying NF-κB/p65 antisense oligonucleotide in RAW264.7 macropghage stimulated by lipopolysaccharide. , 2016, Colloids and surfaces. B, Biointerfaces.

[58]  David R. Liu,et al.  Programmable editing of a target base in genomic DNA without double-stranded DNA cleavage , 2016, Nature.

[59]  Robert Langer,et al.  Combinatorial hydrogel library enables identification of materials that mitigate the foreign body response in primates , 2016, Nature Biotechnology.

[60]  F. Santilli,et al.  Role of lipid rafts in neuronal differentiation of dental pulp-derived stem cells. , 2015, Experimental Cell Research.

[61]  W. Yin,et al.  The Gene Network Underlying Hypodontia , 2015, Journal of dental research.

[62]  J. Doudna,et al.  The new frontier of genome engineering with CRISPR-Cas9 , 2014, Science.

[63]  E. Olson,et al.  Prevention of muscular dystrophy in mice by CRISPR/Cas9–mediated editing of germline DNA , 2014, Science.

[64]  T. Sakai,et al.  “Nonswellable” Hydrogel Without Mechanical Hysteresis , 2014, Science.

[65]  David A. Scott,et al.  Genome engineering using the CRISPR-Cas9 system , 2013, Nature Protocols.

[66]  David A. Scott,et al.  Double Nicking by RNA-Guided CRISPR Cas9 for Enhanced Genome Editing Specificity , 2013, Cell.

[67]  B. Rabie,et al.  Electroporation for Transfection and Differentiation of Dental Pulp Stem Cells , 2013, BioResearch open access.

[68]  I. Atsuta,et al.  Stem cells in dentistry--part I: stem cell sources. , 2012, Journal of prosthodontic research.

[69]  Z. Bian,et al.  Novel missense mutations in PAX9 causing oligodontia. , 2012, Archives of oral biology.

[70]  B. Grzybowski,et al.  Gene therapy vectors with enhanced transfection based on hydrogels modified with affinity peptides. , 2011, Biomaterials.

[71]  M. Nakashima,et al.  Human dental pulp stem cells with highly angiogenic and neurogenic potential for possible use in pulp regeneration. , 2009, Cytokine & growth factor reviews.

[72]  Brooke R. Snyder,et al.  Putative Dental Pulp‐Derived Stem/Stromal Cells Promote Proliferation and Differentiation of Endogenous Neural Cells in the Hippocampus of Mice , 2008, Stem cells.

[73]  S. Gronthos,et al.  Adult Human Dental Pulp Stem Cells Differentiate Toward Functionally Active Neurons Under Appropriate Environmental Cues , 2008, Stem cells.

[74]  Tae Gwan Park,et al.  Thermo-sensitive and biodegradable hydrogels based on stereocomplexed Pluronic multi-block copolymers for controlled protein delivery. , 2008, Journal of controlled release : official journal of the Controlled Release Society.

[75]  Peter Fredericks,et al.  Interactions between alginate and chitosan biopolymers characterized using FTIR and XPS. , 2007, Biomacromolecules.

[76]  A. Akamine,et al.  The application of tissue engineering to regeneration of pulp and dentin in endodontics. , 2005, Journal of endodontics.

[77]  K. Leong,et al.  The effect of the degree of chitosan deacetylation on the efficiency of gene transfection. , 2004, Biomaterials.

[78]  A. Boyde,et al.  Stem Cell Properties of Human Dental Pulp Stem Cells , 2002, Journal of dental research.

[79]  L. Paulin,et al.  Identification of a nonsense mutation in the PAX9 gene in molar oligodontia , 2001, European Journal of Human Genetics.

[80]  D. Schild,et al.  Homologous recombinational repair of DNA ensures mammalian chromosome stability. , 2001, Mutation research.

[81]  S. Gronthos,et al.  Postnatal human dental pulp stem cells (DPSCs) in vitro and in vivo. , 2000, Proceedings of the National Academy of Sciences of the United States of America.

[82]  J. Haber Partners and pathwaysrepairing a double-strand break. , 2000, Trends in genetics : TIG.

[83]  M. Ferguson,et al.  Epithelial-mesenchymal interactions are required for msx 1 and msx 2 gene expression in the developing murine molar tooth. , 1993, Development.

[84]  R. Kramar [The contribution of peroxisomes to lipid metabolism]. , 1986, Journal of clinical chemistry and clinical biochemistry. Zeitschrift fur klinische Chemie und klinische Biochemie.

[85]  Y. Liu,et al.  Genetic Modification in Human Pluripotent Stem Cells by Homologous Recombination and CRISPR/Cas9 System. , 2016, Methods in molecular biology.

[86]  G. Papaccio,et al.  Dental Pulp Stem Cells: A Promising Tool for Bone Regeneration , 2008, Stem Cell Reviews.

[87]  D. Prockop,et al.  Minimal criteria for defining multipotent mesenchymal stromal cells. The International Society for Cellular Therapy position statement. , 2006, Cytotherapy.

[88]  R. Balling,et al.  Pax genes and organogenesis: Pax9 meets tooth development. , 1998, European journal of oral sciences.