Recommended Guidelines for Developing, Qualifying, and Implementing Complex In Vitro Models (CIVMs) for Drug Discovery
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Wendy Rowan | Jason E Ekert | Julianna Deakyne | Philippa Pribul-Allen | Rebecca Terry | Christopher Schofield | Claire G Jeong | Joanne Storey | Lisa Mohamet | Jo Francis | Anita Naidoo | Alejandro Amador | Jean-Louis Klein | C. Jeong | J. Ekert | Jason E. Ekert | L. Mohamet | J. Deakyne | C. Schofield | Jean-Louis Klein | W. Rowan | Rebecca Terry | A. Amador | Anita A. Naidoo | Philippa Pribul-Allen | Joanne Storey | Jo Francis | Jo Francis | Christopher A. Schofield
[1] Roland Eils,et al. Resolving drug effects in patient-derived cancer cells links organoid responses to genome alterations , 2017, bioRxiv.
[2] Kjell Johnson,et al. Three-Dimensional Lung Tumor Microenvironment Modulates Therapeutic Compound Responsiveness In Vitro – Implication for Drug Development , 2014, PloS one.
[3] David B Duignan,et al. Navigating tissue chips from development to dissemination: A pharmaceutical industry perspective , 2017, Experimental biology and medicine.
[4] Hans Clevers,et al. Tales from the crypt: new insights into intestinal stem cells , 2018, Nature Reviews Gastroenterology & Hepatology.
[5] Gianni Dal Negro,et al. Application of complex in vitro models (CIVMs) in drug discovery for safety testing and disease modeling , 2019, Microfluidic Cell Culture Systems.
[6] J. Collins,et al. Contributions of microbiome and mechanical deformation to intestinal bacterial overgrowth and inflammation in a human gut-on-a-chip , 2015, Proceedings of the National Academy of Sciences.
[7] R. Kamm,et al. Microfluidics: A new tool for modeling cancer-immune interactions. , 2016, Trends in cancer.
[8] Raymond R Tice,et al. FutureTox II: in vitro data and in silico models for predictive toxicology. , 2015, Toxicological sciences : an official journal of the Society of Toxicology.
[9] G. Dubini,et al. Human 3D vascularized organotypic microfluidic assays to study breast cancer cell extravasation , 2014, Proceedings of the National Academy of Sciences.
[10] Murat Cirit,et al. Maximizing the impact of microphysiological systems with in vitro-in vivo translation. , 2018, Lab on a chip.
[11] S. Nik-Zainal,et al. Use of CRISPR-modified human stem cell organoids to study the origin of mutational signatures in cancer , 2017, Science.
[12] Darren Finlay,et al. 3-Dimensional Culture Systems for Anti-Cancer Compound Profiling and High-Throughput Screening Reveal Increases in EGFR Inhibitor-Mediated Cytotoxicity Compared to Monolayer Culture Systems , 2014, PloS one.
[13] Michael Quante,et al. Three-Dimensional Gastrointestinal Organoid Culture in Combination with Nerves or Fibroblasts: A Method to Characterize the Gastrointestinal Stem Cell Niche , 2015, Stem cells international.
[14] Harikrishna Narasimhan,et al. Predicting clinical response to anticancer drugs using an ex vivo platform that captures tumour heterogeneity , 2015, Nature Communications.
[15] E. Stanley,et al. Directing human embryonic stem cell differentiation towards a renal lineage generates a self-organizing kidney , 2013, Nature Cell Biology.
[16] Dirk Schumacher,et al. Assay Establishment and Validation of a High-Throughput Screening Platform for Three-Dimensional Patient-Derived Colon Cancer Organoid Cultures , 2016, Journal of biomolecular screening.
[17] Kyung-Jin Jang,et al. Duodenum Intestine-Chip for preclinical drug assessment in a human relevant model , 2020, eLife.
[18] Hans Clevers,et al. A functional CFTR assay using primary cystic fibrosis intestinal organoids , 2013, Nature Medicine.
[19] Mulin Jun Li,et al. Nature Genetics Advance Online Publication a N a Ly S I S the Support of Human Genetic Evidence for Approved Drug Indications , 2022 .
[20] Ata Mahjoubfar,et al. Deep Learning in Label-free Cell Classification , 2016, Scientific Reports.
[21] Gail H Deutsch,et al. In vitro generation of human pluripotent stem cell derived lung organoids , 2015, eLife.
[22] Mohsen Akbari,et al. Microfluidic-Based Multi-Organ Platforms for Drug Discovery , 2016, Micromachines.
[23] D. Ingber,et al. Microfluidic organs-on-chips , 2014, Nature Biotechnology.
[24] Deepak Choudhury,et al. Engineering Microfluidic Organoid-on-a-Chip Platforms , 2019, Micromachines.
[25] A Lavecchia,et al. Virtual screening strategies in drug discovery: a critical review. , 2013, Current medicinal chemistry.
[26] Jonathan S. Weissman,et al. Reprogramming human T cell function and specificity with non-viral genome targeting , 2017, Nature.
[27] Murat Cirit,et al. Multi-functional scaling methodology for translational pharmacokinetic and pharmacodynamic applications using integrated microphysiological systems (MPS). , 2017, Integrative biology : quantitative biosciences from nano to macro.
[28] Frank Jacobs,et al. Comparison of Hepatic 2D Sandwich Cultures and 3D Spheroids for Long-term Toxicity Applications: A Multicenter Study , 2018, Toxicological sciences : an official journal of the Society of Toxicology.
[29] Murat Cirit,et al. Integrated Gut and Liver Microphysiological Systems for Quantitative In Vitro Pharmacokinetic Studies , 2017, The AAPS Journal.
[30] Sean Ekins,et al. Comparison of Deep Learning With Multiple Machine Learning Methods and Metrics Using Diverse Drug Discovery Data Sets. , 2017, Molecular pharmaceutics.
[31] Samuel J. Yang,et al. In Silico Labeling: Predicting Fluorescent Labels in Unlabeled Images , 2018, Cell.
[32] Jeffrey K. Aronson,et al. Post-marketing withdrawal of anti-obesity medicinal products because of adverse drug reactions: a systematic review , 2016, BMC Medicine.
[33] Matthew Loxham,et al. Cellular crosstalk between airway epithelial and endothelial cells regulates barrier functions during exposure to double‐stranded RNA , 2017, Immunity, inflammation and disease.
[34] Martin Wehling,et al. Translatability score revisited: differentiation for distinct disease areas , 2017, Journal of Translational Medicine.
[35] DA Lauffenburger,et al. Quantitative Systems Pharmacology Approaches Applied to Microphysiological Systems (MPS): Data Interpretation and Multi-MPS Integration , 2015, CPT: pharmacometrics & systems pharmacology.
[36] Louis Scampavia,et al. A Novel 3-dimensional High Throughput Screening Approach Identifies Inducers of a Mutant KRAS Selective Lethal Phenotype , 2018, Oncogene.
[37] Wen Feng Lu,et al. 3D bioprinting of tissues and organs for regenerative medicine☆ , 2018, Advanced drug delivery reviews.
[38] Kate Lawrenson,et al. A three-dimensional microenvironment alters protein expression and chemosensitivity of epithelial ovarian cancer cells in vitro , 2013, Laboratory Investigation.
[39] Steven C George,et al. A vascularized and perfused organ-on-a-chip platform for large-scale drug screening applications. , 2017, Lab on a chip.
[40] Sai Siva Gorthi,et al. Cytopathological image analysis using deep-learning networks in microfluidic microscopy. , 2017, Journal of the Optical Society of America. A, Optics, image science, and vision.
[41] Madeline A. Lancaster,et al. Cerebral organoids model human brain development and microcephaly , 2013, Nature.
[42] P. Levkin,et al. Droplet Microarrays: From Surface Patterning to High‐Throughput Applications , 2018, Advanced materials.
[43] George Q. Daley,et al. Induced pluripotent stem cells in disease modelling and drug discovery , 2019, Nature Reviews Genetics.
[44] Francesco Iorio,et al. CELLector: Genomics Guided Selection of Cancer in vitro Models , 2018, bioRxiv.
[45] Jack W Scannell,et al. When Quality Beats Quantity: Decision Theory, Drug Discovery, and the Reproducibility Crisis , 2016, PloS one.
[46] Uwe Marx,et al. Biology-inspired microphysiological system approaches to solve the prediction dilemma of substance testing. , 2016, ALTEX.
[47] P. Bernardi,et al. High concordance of drug-induced human hepatotoxicity with in vitro cytotoxicity measured in a novel cell-based model using high content screening , 2006, Archives of Toxicology.
[48] Dimitrios I. Fotiadis,et al. Machine learning applications in cancer prognosis and prediction , 2014, Computational and structural biotechnology journal.
[49] Donald E Ingber,et al. Organ‐on‐Chip Recapitulates Thrombosis Induced by an anti‐CD154 Monoclonal Antibody: Translational Potential of Advanced Microengineered Systems , 2018, Clinical pharmacology and therapeutics.
[50] Nic Fleming,et al. How artificial intelligence is changing drug discovery , 2018, Nature.
[51] J. Haycock,et al. State-of-the-art of 3D cultures (organs-on-a-chip) in safety testing and pathophysiology. , 2014, ALTEX.
[52] Hans Clevers,et al. Sequential cancer mutations in cultured human intestinal stem cells , 2015, Nature.
[53] Ronan M. T. Fleming,et al. 3D Cultures of Parkinson's Disease‐Specific Dopaminergic Neurons for High Content Phenotyping and Drug Testing , 2018, Advanced science.
[54] James C. Pino,et al. Integrated, High-Throughput, Multiomics Platform Enables Data-Driven Construction of Cellular Responses and Reveals Global Drug Mechanisms of Action. , 2017, Journal of proteome research.
[55] Hayley E. Francies,et al. Prospective Derivation of a Living Organoid Biobank of Colorectal Cancer Patients , 2015, Cell.
[56] Donald E Ingber,et al. Human Organ Chip Models Recapitulate Orthotopic Lung Cancer Growth, Therapeutic Responses, and Tumor Dormancy In Vitro. , 2017, Cell reports.
[57] Stefan Przyborski,et al. Advances in 3D cell culture technologies enabling tissue‐like structures to be created in vitro , 2014, Journal of anatomy.
[58] Michael Hay,et al. Clinical development success rates for investigational drugs , 2014, Nature Biotechnology.
[59] H. Clevers,et al. Single Lgr5 stem cells build cryptvillus structures in vitro without a mesenchymal niche , 2009, Nature.
[60] R. Locksley,et al. Cross-Talk between Epithelial Cells and Type 2 Immune Signaling. The Role of IL-25. , 2016, American journal of respiratory and critical care medicine.
[61] David J. Nicholls,et al. Impact of a five-dimensional framework on R&D productivity at AstraZeneca , 2018, Nature Reviews Drug Discovery.
[62] R. Fleck,et al. 3D microfluidic liver cultures as a physiological preclinical tool for hepatitis B virus infection , 2018, Nature Communications.
[63] Woojung Shin,et al. Pathomimetic modeling of human intestinal diseases and underlying host-gut microbiome interactions in a gut-on-a-chip. , 2018, Methods in cell biology.
[64] Murat Cirit,et al. Interconnected Microphysiological Systems for Quantitative Biology and Pharmacology Studies , 2018, Scientific Reports.
[65] Uwe Marx,et al. Functional coupling of human pancreatic islets and liver spheroids on-a-chip: Towards a novel human ex vivo type 2 diabetes model , 2017, Scientific Reports.
[66] Thomas C. Ferrante,et al. Small airway-on-a-chip enables analysis of human lung inflammation and drug responses in vitro , 2015, Nature Methods.
[67] T. Singer,et al. Bioprinted 3D Primary Liver Tissues Allow Assessment of Organ-Level Response to Clinical Drug Induced Toxicity In Vitro , 2016, PloS one.
[68] Louis Scampavia,et al. A 1536-Well 3D Viability Assay to Assess the Cytotoxic Effect of Drugs on Spheroids , 2017, SLAS discovery : advancing life sciences R & D.
[69] Thomas Hankemeier,et al. Microfluidic 3D cell culture: from tools to tissue models. , 2015, Current opinion in biotechnology.
[70] Bin Zhang,et al. 3D Bioprinting: A Novel Avenue for Manufacturing Tissues and Organs , 2019, Engineering.
[71] Simon Messner,et al. Utility of spherical human liver microtissues for prediction of clinical drug-induced liver injury , 2017, Archives of Toxicology.
[72] Dietmar W. Hutmacher,et al. Bioengineered 3D platform to explore cell-ECM interactions and drug resistance of epithelial ovarian cancer cells. , 2010, Biomaterials.
[73] Hans Clevers,et al. Modeling Human Digestive Diseases With CRISPR-Cas9-Modified Organoids. , 2019, Gastroenterology.
[74] Takanori Kanai,et al. Modeling colorectal cancer using CRISPR-Cas9–mediated engineering of human intestinal organoids , 2015, Nature Medicine.
[75] James P. Freyer,et al. The Use of 3-D Cultures for High-Throughput Screening: The Multicellular Spheroid Model , 2004, Journal of biomolecular screening.
[76] Akiko Seki,et al. Optimized RNP transfection for highly efficient CRISPR/Cas9-mediated gene knockout in primary T cells , 2018, The Journal of experimental medicine.
[77] M. Ingelman-Sundberg,et al. Characterization of primary human hepatocyte spheroids as a model system for drug-induced liver injury, liver function and disease , 2016, Scientific Reports.
[78] Stephen T. Holgate,et al. Barrier responses of human bronchial epithelial cells to grass pollen exposure , 2012, European Respiratory Journal.
[79] H. Moriya,et al. Quantitative nature of overexpression experiments , 2015, Molecular biology of the cell.
[80] PresnellSharon,et al. Modeling Liver Biology and the Tissue Response to Injury in Bioprinted Human Liver Tissues , 2018 .
[81] O. Joseph Trask,et al. Concerns, challenges and promises of high-content analysis of 3D cellular models , 2018, Nature Reviews Drug Discovery.
[82] R. Rowntree,et al. Induced pluripotent stem cells: opportunities as research and development tools in 21st century drug discovery. , 2010, Regenerative medicine.
[83] Hans Clevers,et al. Functional repair of CFTR by CRISPR/Cas9 in intestinal stem cell organoids of cystic fibrosis patients. , 2013, Cell stem cell.
[84] Daniel C Leslie,et al. A Human Disease Model of Drug Toxicity–Induced Pulmonary Edema in a Lung-on-a-Chip Microdevice , 2012, Science Translational Medicine.
[85] Max A. Horlbeck,et al. Genome-Scale CRISPR-Mediated Control of Gene Repression and Activation , 2014, Cell.
[86] Saeed Alqahtani,et al. In silico ADME-Tox modeling: progress and prospects , 2017, Expert opinion on drug metabolism & toxicology.
[87] R. Lovell-Badge,et al. Guidelines for the use of cell lines in biomedical research , 2014, British Journal of Cancer.