The protein interaction network of a taxis signal transduction system in a Halophilic Archaeon
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M. Schlesner | D. Oesterhelt | M. Aivaliotis | H. Besir | F. Siedler | Arthur Miller | J. Streif | B. Scheffer
[1] E. Birney,et al. Pfam: the protein families database , 2013, Nucleic Acids Res..
[2] J. Tainer,et al. Archaeal flagellar ATPase motor shows ATP-dependent hexameric assembly and activity stimulation by specific lipid binding. , 2011, The Biochemical journal.
[3] Y. Tu,et al. Adapt locally and act globally: strategy to maintain high chemoreceptor sensitivity in complex environments , 2011, Molecular systems biology.
[4] C. V. Rao,et al. Attractant Binding Induces Distinct Structural Changes to the Polar and Lateral Signaling Clusters in Bacillus subtilis Chemotaxis* , 2010, The Journal of Biological Chemistry.
[5] Roger Alexander,et al. CheV: CheW-like coupling proteins at the core of the chemotaxis signaling network. , 2010, Trends in microbiology.
[6] Stefan Streif,et al. A predictive computational model of the kinetic mechanism of stimulus-induced transducer methylation and feedback regulation through CheY in archaeal phototaxis and chemotaxis , 2010, BMC Systems Biology.
[7] J. Falke,et al. The core signaling proteins of bacterial chemotaxis assemble to form an ultrastable complex. , 2009, Biochemistry.
[8] J. Lengeler,et al. Bacterial PEP-dependent carbohydrate: phosphotransferase systems couple sensing and global control mechanisms. , 2009, Contributions to microbiology.
[9] Dieter Oesterhelt,et al. Phosphate-Dependent Behavior of the Archaeon Halobacterium salinarum Strain R1 , 2009, Journal of bacteriology.
[10] Ralf Zimmer,et al. Systems Analysis of Bioenergetics and Growth of the Extreme Halophile Halobacterium salinarum , 2009, PLoS Comput. Biol..
[11] Wolfgang Marwan,et al. Quantitative analysis of signal transduction in motile and phototactic cells by computerized light stimulation and model based tracking. , 2009, The Review of scientific instruments.
[12] V. Sourjik,et al. Dynamic map of protein interactions in the Escherichia coli chemotaxis pathway , 2009, Molecular systems biology.
[13] Stefan Streif,et al. Flagellar rotation in the archaeon Halobacterium salinarum depends on ATP. , 2008, Journal of molecular biology.
[14] G. Ordal,et al. The diverse CheC‐type phosphatases: chemotaxis and beyond , 2008, Molecular microbiology.
[15] C. V. Rao,et al. The three adaptation systems of Bacillus subtilis chemotaxis. , 2008, Trends in microbiology.
[16] Dieter Oesterhelt,et al. Physiological sites of deamidation and methyl esterification in sensory transducers of Halobacterium salinarum. , 2008, Journal of molecular biology.
[17] Kathrin Klee,et al. Genome information management and integrated data analysis with HaloLex , 2008, Archives of Microbiology.
[18] Sebastian Thiem,et al. Protein exchange dynamics at chemoreceptor clusters in Escherichia coli , 2008, Proceedings of the National Academy of Sciences.
[19] F Pfeiffer,et al. Evolution in the laboratory: the genome of Halobacterium salinarum strain R1 compared to that of strain NRC-1. , 2008, Genomics.
[20] V. Tarasov,et al. A small protein from the bop–brp intergenic region of Halobacterium salinarum contains a zinc finger motif and regulates bop and crtB1 transcription , 2008, Molecular microbiology.
[21] Lan Huang,et al. Identifying Dynamic Interactors of Protein Complexes by Quantitative Mass Spectrometry*S , 2008, Molecular & Cellular Proteomics.
[22] G. Ordal,et al. The CheC Phosphatase Regulates Chemotactic Adaptation through CheD* , 2007, Journal of Biological Chemistry.
[23] K. Jarrell,et al. Systematic deletion analyses of the fla genes in the flagella operon identify several genes essential for proper assembly and function of flagella in the archaeon, Methanococcus maripaludis , 2007, Molecular microbiology.
[24] R. D. del Rosario,et al. Modelling the CheY(D10K,Yl00W) Halobacterium salinarum mutant: sensitivity analysis allows choice of parameter to be modified in the phototaxis model. , 2007, IET systems biology.
[25] Julie A. Hines,et al. A proteome-wide protein interaction map for Campylobacter jejuni , 2007, Genome Biology.
[26] V. Sourjik,et al. Spatial organization of the bacterial chemotaxis system. , 2006, Current opinion in microbiology.
[27] Sebastian Thiem,et al. Determinants of chemoreceptor cluster formation in Escherichia coli , 2006, Molecular microbiology.
[28] S. Kanaya,et al. Large-scale identification of protein-protein interaction of Escherichia coli K-12. , 2006, Genome research.
[29] Sheng Zhang,et al. A Receptor-Modifying Deamidase in Complex with a Signaling Phosphatase Reveals Reciprocal Regulation , 2006, Cell.
[30] C. Kai,et al. Protein-protein interactions of the hyperthermophilic archaeon Pyrococcus horikoshii OT3 , 2005, Genome Biology.
[31] Wolfgang Marwan,et al. A quantitative model of the switch cycle of an archaeal flagellar motor and its sensory control. , 2005, Biophysical journal.
[32] R. Aebersold,et al. A uniform proteomics MS/MS analysis platform utilizing open XML file formats , 2005, Molecular systems biology.
[33] L. Kiessling,et al. Large increases in attractant concentration disrupt the polar localization of bacterial chemoreceptors , 2005, Molecular microbiology.
[34] 刘金明,et al. IL-13受体α2降低血吸虫病肉芽肿的炎症反应并延长宿主存活时间[英]/Mentink-Kane MM,Cheever AW,Thompson RW,et al//Proc Natl Acad Sci U S A , 2005 .
[35] Adam P Arkin,et al. Phosphatase localization in bacterial chemotaxis: divergent mechanisms, convergent principles , 2005, Physical biology.
[36] L. Holm,et al. The Pfam protein families database , 2005, Nucleic Acids Res..
[37] Dieter Oesterhelt,et al. MpcT is the transducer for membrane potential changes in Halobacterium salinarum , 2005, Molecular microbiology.
[38] A. Emili,et al. Interaction network containing conserved and essential protein complexes in Escherichia coli , 2005, Nature.
[39] Virgil L. Woods,et al. On the use of DXMS to produce more crystallizable proteins: Structures of the T. maritima proteins TM0160 and TM1171 , 2004, Protein science : a publication of the Protein Society.
[40] Hendrik Szurmant,et al. Diversity in Chemotaxis Mechanisms among the Bacteria and Archaea , 2004, Microbiology and Molecular Biology Reviews.
[41] Hendrik Szurmant,et al. Bacillus subtilis CheC and FliY Are Members of a Novel Class of CheY-P-hydrolyzing Proteins in the Chemotactic Signal Transduction Cascade* , 2004, Journal of Biological Chemistry.
[42] H. Berg,et al. Functional interactions between receptors in bacterial chemotaxis , 2004, Nature.
[43] H. Szurmant,et al. Bacillus subtilis Hydrolyzes CheY-P at the Location of Its Action, the Flagellar Switch* , 2003, Journal of Biological Chemistry.
[44] Wolfgang Marwan,et al. Signal processing and flagellar motor switching during phototaxis of Halobacterium salinarum. , 2003, Genome research.
[45] R. Aebersold,et al. Automated statistical analysis of protein abundance ratios from data generated by stable-isotope dilution and tandem mass spectrometry. , 2003, Analytical chemistry.
[46] Darren A. Natale,et al. The COG database: an updated version includes eukaryotes , 2003, BMC Bioinformatics.
[47] R. Aebersold,et al. A statistical model for identifying proteins by tandem mass spectrometry. , 2003, Analytical chemistry.
[48] V. Irihimovitch,et al. Post-translational Secretion of Fusion Proteins in the Halophilic Archaea Haloferax volcanii * , 2003, The Journal of Biological Chemistry.
[49] Satoshi Fukuchi,et al. Unique amino acid composition of proteins in halophilic bacteria. , 2003, Journal of molecular biology.
[50] Blagoy Blagoev,et al. A proteomics strategy to elucidate functional protein-protein interactions applied to EGF signaling , 2003, Nature Biotechnology.
[51] M. Mann,et al. Stop and go extraction tips for matrix-assisted laser desorption/ionization, nanoelectrospray, and LC/MS sample pretreatment in proteomics. , 2003, Analytical chemistry.
[52] V. Irihimovitch,et al. Isolation of fusion proteins containing SecY and SecE, components of the protein translocation complex from the halophilic archaeon Haloferax volcanii , 2003, Extremophiles.
[53] Gary D Bader,et al. Analyzing yeast protein–protein interaction data obtained from different sources , 2002, Nature Biotechnology.
[54] J. Stock,et al. Organization of the Receptor-Kinase Signaling Array That Regulates Escherichia coli Chemotaxis* , 2002, The Journal of Biological Chemistry.
[55] R. M. Owen,et al. Conserved Amplification of Chemotactic Responses through Chemoreceptor Interactions , 2002, Journal of bacteriology.
[56] H. Berg,et al. Binding of the Escherichia coli response regulator CheY to its target measured in vivo by fluorescence resonance energy transfer , 2002, Proceedings of the National Academy of Sciences of the United States of America.
[57] G. Ordal,et al. Bacillus subtilis CheD Is a Chemoreceptor Modification Enzyme Required for Chemotaxis* , 2002, The Journal of Biological Chemistry.
[58] Dieter Oesterhelt,et al. A novel mode of sensory transduction in archaea: binding protein‐mediated chemotaxis towards osmoprotectants and amino acids , 2002, The EMBO journal.
[59] M. Mann,et al. Stable Isotope Labeling by Amino Acids in Cell Culture, SILAC, as a Simple and Accurate Approach to Expression Proteomics* , 2002, Molecular & Cellular Proteomics.
[60] J. S. Parkinson,et al. Collaborative signaling by mixed chemoreceptor teams in Escherichia coli , 2002, Proceedings of the National Academy of Sciences of the United States of America.
[61] Gideon Schreiber,et al. Kinetic studies of protein-protein interactions. , 2002, Current opinion in structural biology.
[62] J. Kirby,et al. CheC is related to the family of flagellar switch proteins and acts independently from CheD to control chemotaxis in Bacillus subtilis , 2001, Molecular microbiology.
[63] S. Schuster,et al. The fla gene cluster is involved in the biogenesis of flagella in Halobacterium salinarum , 2001, Molecular microbiology.
[64] K. Jarrell,et al. The archaeal flagellum: a different kind of prokaryotic motility structure. , 2001, FEMS microbiology reviews.
[65] J. Wojcik,et al. The protein–protein interaction map of Helicobacter pylori , 2001, Nature.
[66] Jason E. Gestwicki,et al. Evolutionary Conservation of Methyl-Accepting Chemotaxis Protein Location in Bacteria andArchaea , 2000, Journal of bacteriology.
[67] V. Thorsson,et al. Genome sequence of Halobacterium species NRC-1. , 2000, Proceedings of the National Academy of Sciences of the United States of America.
[68] F. Frolow,et al. Halophilic enzymes: proteins with a grain of salt. , 2000, Biophysical chemistry.
[69] R. Ortenberg,et al. Evidence for Post-translational Membrane Insertion of the Integral Membrane Protein Bacterioopsin Expressed in the Heterologous Halophilic Archaeon Haloferax volcanii * , 2000, The Journal of Biological Chemistry.
[70] M. Alam,et al. Myoglobin-like aerotaxis transducers in Archaea and Bacteria , 2000, Nature.
[71] D. Oesterhelt,et al. BasT, a membrane‐bound transducer protein for amino acid detection in Halobacterium salinarum , 2000, Molecular microbiology.
[72] J. Spudich,et al. Identification of Methylation Sites and Effects of Phototaxis Stimuli on Transducer Methylation in Halobacterium salinarum , 1999, Journal of bacteriology.
[73] T. Duke,et al. Heightened sensitivity of a lattice of membrane receptors. , 1999, Proceedings of the National Academy of Sciences of the United States of America.
[74] J. Stock,et al. Mechanism of CheA protein kinase activation in receptor signaling complexes. , 1999, Biochemistry.
[75] Dieter Oesterhelt,et al. Car: a cytoplasmic sensor responsible for arginine chemotaxis in the archaeon Halobacterium salinarum , 1999, The EMBO journal.
[76] N. Patenge,et al. Extensive proteolysis inhibits high-level production of eukaryal G protein-coupled receptors in the archaeon Haloferax volcanii. , 1999, FEMS microbiology letters.
[77] B. Snel,et al. Conservation of gene order: a fingerprint of proteins that physically interact. , 1998, Trends in biochemical sciences.
[78] D. Bray,et al. Receptor clustering as a cellular mechanism to control sensitivity , 1998, Nature.
[79] M. Alam,et al. An Archaeal Aerotaxis Transducer Combines Subunit I Core Structures of Eukaryotic Cytochrome c Oxidase and Eubacterial Methyl-Accepting Chemotaxis Proteins , 1998, Journal of bacteriology.
[80] M. Alam,et al. Sensory Rhodopsin II Transducer HtrII Is Also Responsible for Serine Chemotaxis in the ArchaeonHalobacterium salinarum , 1998, Journal of bacteriology.
[81] K. Jarrell,et al. Further evidence to suggest that archaeal flagella are related to bacterial type IV pili. , 1998, Journal of molecular evolution.
[82] Ann M Stock,et al. Structural basis for methylesterase CheB regulation by a phosphorylation-activated domain. , 1998, Proceedings of the National Academy of Sciences of the United States of America.
[83] D. Lipman,et al. A genomic perspective on protein families. , 1997, Science.
[84] G. Ordal,et al. Activation of the CheA kinase by asparagine in Bacillus subtilis chemotaxis. , 1997, Microbiology.
[85] B. P. McNamara,et al. Coexpression of the long and short forms of CheA, the chemotaxis histidine kinase, by members of the family Enterobacteriaceae , 1997, Journal of bacteriology.
[86] G. Ordal,et al. CheC and CheD interact to regulate methylation of Bacillus subtilis methyl‐accepting chemotaxis proteins , 1996, Molecular microbiology.
[87] J. Rudolph,et al. Deletion analysis of the che operon in the archaeon Halobacterium salinarium. , 1996, Journal of molecular biology.
[88] A. Shevchenko,et al. Mass spectrometric sequencing of proteins silver-stained polyacrylamide gels. , 1996, Analytical chemistry.
[89] J. Soppa,et al. Characterization of the distal promoter element of halobacteria in vivo using saturation mutagenesis and selection , 1996, Molecular microbiology.
[90] Stefan Dipl.-Ing. Schuster,et al. Phosphorylation in halobacterial signal transduction. , 1995, The EMBO journal.
[91] M. Engelhard,et al. The primary structure of sensory rhodopsin II: a member of an additional retinal protein subgroup is coexpressed with its transducer, the halobacterial transducer of rhodopsin II. , 1995, Proceedings of the National Academy of Sciences of the United States of America.
[92] J. S. Parkinson,et al. Constitutively signaling fragments of Tsr, the Escherichia coli serine chemoreceptor , 1994, Journal of bacteriology.
[93] J. Helmann,et al. Dual chemotaxis signaling pathways in Bacillus subtilis: a sigma D-dependent gene encodes a novel protein with both CheW and CheY homologous domains , 1994, Journal of bacteriology.
[94] J. Helmann,et al. Chemotaxis in Bacillus subtilis requires either of two functionally redundant CheW homologs , 1994, Journal of bacteriology.
[95] D. Henner,et al. Chemotactic methyltransferase promotes adaptation to repellents in Bacillus subtilis. , 1993, The Journal of biological chemistry.
[96] D. Oesterhelt,et al. Sensory rhodopsin‐controlled release of the switch factor fumarate in Halobacterium salinarium , 1993, Molecular microbiology.
[97] Stephan C. Schuster,et al. Assembly and function of a quaternary signal transduction complex monitored by surface plasmon resonance , 1993, Nature.
[98] R. Bourret,et al. Purification and characterization of Bacillus subtilis CheY. , 1993, Biochemistry.
[99] J. Kirby,et al. Chemotactic methylesterase promotes adaptation to high concentrations of attractant in Bacillus subtilis. , 1993, The Journal of biological chemistry.
[100] D. Oesterhelt,et al. The methyl‐accepting transducer protein HtrI is functionally associated with the photoreceptor sensory rhodopsin I in the archaeon Halobacterium salinarium. , 1993, The EMBO journal.
[101] L. Shapiro,et al. Polar location of the chemoreceptor complex in the Escherichia coli cell. , 1993, Science.
[102] J. Spudich,et al. Primary structure of an archaebacterial transducer, a methyl-accepting protein associated with sensory rhodopsin I. , 1992, Proceedings of the National Academy of Sciences of the United States of America.
[103] Frederick W. Dahlquist,et al. Assembly of an MCP receptor, CheW, and kinase CheA complex in the bacterial chemotaxis signal transduction pathway , 1992, Cell.
[104] P. Matsumura,et al. Bacterial chemotaxis signaling complexes: formation of a CheA/CheW complex enhances autophosphorylation and affinity for CheY. , 1991, Proceedings of the National Academy of Sciences of the United States of America.
[105] J. Stock,et al. Reconstitution of the bacterial chemotaxis signal transduction system from purified components. , 1991, The Journal of biological chemistry.
[106] F. Dahlquist,et al. Mutations that affect control of the methylesterase activity of CheB, a component of the chemotaxis adaptation system in Escherichia coli , 1990, Journal of bacteriology.
[107] M. Dyall-Smith,et al. A plasmid vector with a selectable marker for halophilic archaebacteria , 1990, Journal of bacteriology.
[108] D. Oesterhelt,et al. Signal transduction in Halobacterium depends on fumarate. , 1990, The EMBO journal.
[109] A. Lupas,et al. Phosphorylation of an N-terminal regulatory domain activates the CheB methylesterase in bacterial chemotaxis. , 1989, The Journal of biological chemistry.
[110] M. Simon,et al. Transmembrane signal transduction in bacterial chemotaxis involves ligand-dependent activation of phosphate group transfer. , 1989, Proceedings of the National Academy of Sciences of the United States of America.
[111] C. A. Hasselbacher,et al. Methyl-accepting protein associated with bacterial sensory rhodopsin I , 1988, Journal of bacteriology.
[112] Kenji Oosawa,et al. Phosphorylation of three proteins in the signaling pathway of bacterial chemotaxis , 1988, Cell.
[113] D. Koshland,et al. Homologies between the Salmonella typhimurium CheY protein and proteins involved in the regulation of chemotaxis, membrane protein synthesis, and sporulation. , 1985, Proceedings of the National Academy of Sciences of the United States of America.
[114] J. S. Parkinson,et al. Interactions between chemotaxis genes and flagellar genes in Escherichia coli , 1983, Journal of bacteriology.
[115] D. Oesterhelt,et al. Phototrophic growth of halobacteria and its use for isolation of photosynthetically-deficient mutants. , 1983, Annales de microbiologie.
[116] M. Hunkapiller,et al. Enzymatic deamidation of methyl-accepting chemotaxis proteins in Escherichia coli catalyzed by the cheB gene product. , 1983, Proceedings of the National Academy of Sciences of the United States of America.
[117] J. S. Parkinson,et al. Posttranslational processing of methyl-accepting chemotaxis proteins in Escherichia coli. , 1981, Proceedings of the National Academy of Sciences of the United States of America.
[118] D. Oesterhelt,et al. Anaerobic growth of halobacteria. , 1980, Proceedings of the National Academy of Sciences of the United States of America.
[119] D. Koshland,et al. A protein methylesterase involved in bacterial sensing. , 1978, Proceedings of the National Academy of Sciences of the United States of America.
[120] J. S. Parkinson,et al. Complementation analysis and deletion mapping of Escherichia coli mutants defective in chemotaxis , 1978, Journal of bacteriology.
[121] J. Lanyi,et al. Salt-dependent properties of proteins from extremely halophilic bacteria. , 1974, Bacteriological reviews.
[122] J H CHRISTIAN,et al. Solute concentrations within cells of halophilic and non-halophilic bacteria. , 1962, Biochimica et biophysica acta.
[123] Johannes Goll,et al. The protein network of bacterial motility , 2007 .
[124] H. Zischka,et al. The membrane proteome of Halobacterium salinarum , 2005, Proteomics.
[125] F. Dahlquist,et al. CheW Binding Interactions with CheA and Tar IMPORTANCE FOR CHEMOTAXIS SIGNALING IN ESCHERICHIA COLI* , 2002 .
[126] W. Doolittle,et al. Transformation methods for halophilic archaebacteria. , 1989, Canadian journal of microbiology.