Deep Learning on Multiphysical Features and Hemodynamic Modeling for Abdominal Aortic Aneurysm Growth Prediction

Prediction of abdominal aortic aneurysm (AAA) growth is of essential importance for the early treatment and surgical intervention of AAA. Capturing key features of vascular growth, such as blood flow and intraluminal thrombus (ILT) accumulation play a crucial role in uncovering the intricated mechanism of vascular adaptation, which can ultimately enhance AAA growth prediction capabilities. However, local correlations between hemodynamic metrics, biological and morphological characteristics, and AAA growth rates present high inter-patient variability that results in that the temporal-spatial biochemical and mechanical processes are still not fully understood. Hence, this study aims to integrate the physics-based knowledge with deep learning with a patch-based convolutional neural network (CNN) approach by incorporating important multiphysical features relating to its pathogenesis for validating its impact on AAA growth prediction. For this task, we observe that the unstructured multiphysical features cannot be directly employed in the kernel-based CNN. To tackle this issue, we propose a parameterization of features to leverage the spatio-temporal relations between multiphysical features. The proposed architecture was tested on different combinations of four features including radius, intraluminal thrombus thickness, time-average wall shear stress, and growth rate from 54 patients with 5-fold cross-validation with two metrics, a root mean squared error (RMSE) and relative error (RE). We conduct extensive experiments on AAA patients, the results show the effect of leveraging multiphysical features and demonstrate the superiority of the presented architecture to previous state-of-the-art methods in AAA growth prediction.

[1]  S. Baek,et al.  Intraluminal thrombus effect on the progression of abdominal aortic aneurysms by using a multistate continuous-time Markov chain model , 2020, medRxiv.

[2]  D. Frakes,et al.  Accelerating massively parallel hemodynamic models of coarctation of the aorta using neural networks , 2020, Scientific Reports.

[3]  J. Raffort,et al.  Prediction of Abdominal Aortic Aneurysm Growth and Risk of Rupture in the Era of Machine Learning , 2020, Angiology.

[4]  Uwe Karst,et al.  Noninvasive imaging of vascular permeability to predict the risk of rupture in abdominal aortic aneurysms using an albumin-binding probe , 2020, Scientific Reports.

[5]  Emrah Akkoyun,et al.  Predicting abdominal aortic aneurysm growth using patient-oriented growth models with two-step Bayesian inference , 2020, Comput. Biol. Medicine.

[6]  D. Saloner,et al.  Intraluminal Thrombus Predicts Rapid Growth of Abdominal Aortic Aneurysms. , 2020, Radiology.

[7]  Liyuan Liu,et al.  On the Variance of the Adaptive Learning Rate and Beyond , 2019, ICLR.

[8]  Y. Yamashita,et al.  Machine Learning to Predict the Rapid Growth of Small Abdominal Aortic Aneurysm. , 2020, Journal of computer assisted tomography.

[9]  Jongeun Choi,et al.  A Deep Learning Approach to Predict Abdominal Aortic Aneurysm Expansion Using Longitudinal Data , 2020, Frontiers in Physics.

[10]  J. Raffort,et al.  Fundamentals in artificial intelligence for vascular surgeons. , 2019, Annals of vascular surgery.

[11]  I. Vignon-Clementel,et al.  A Cohort Longitudinal Study Identifies Morphology and Hemodynamics Predictors of Abdominal Aortic Aneurysm Growth , 2019, Annals of Biomedical Engineering.

[12]  S. De,et al.  Integrating machine learning and multiscale modeling—perspectives, challenges, and opportunities in the biological, biomedical, and behavioral sciences , 2019, npj Digital Medicine.

[13]  Su Ruan,et al.  A review: Deep learning for medical image segmentation using multi-modality fusion , 2019, Array.

[14]  Yeonggul Jang,et al.  A Cascaded Two-step Approach For Segmentation of Thoracic Organs , 2019, SegTHOR@ISBI.

[15]  D. Jarchi,et al.  Applied Machine Learning for the Prediction of Growth of Abdominal Aortic Aneurysm in Humans , 2018, EJVES short reports.

[16]  T. MacGillivray,et al.  Aortic Wall Inflammation Predicts Abdominal Aortic Aneurysm Expansion, Rupture, and Need for Surgical Repair , 2017, Circulation.

[17]  Ronald M. Summers,et al.  Convolutional Invasion and Expansion Networks for Tumor Growth Prediction , 2018, IEEE Transactions on Medical Imaging.

[18]  D. Brat,et al.  Predicting cancer outcomes from histology and genomics using convolutional networks , 2017, Proceedings of the National Academy of Sciences.

[19]  Ashok Handa,et al.  International opinion on priorities in research for small abdominal aortic aneurysms and the potential path for research to impact clinical management. , 2017, International journal of cardiology.

[20]  T. MacGillivray,et al.  Aortic Wall Inflammation Predicts Abdominal Aortic Aneurysm Expansion, Rupture, and Need for Surgical Repair , 2017, Circulation.

[21]  Gregory S. Corrado,et al.  Predicting Cardiovascular Risk Factors from Retinal Fundus Photographs using Deep Learning , 2017, ArXiv.

[22]  Z. Rancic,et al.  Morphological Differences in the Aorto-iliac Segment in AAA Patients of Caucasian and Asian Origin. , 2016, European journal of vascular and endovascular surgery : the official journal of the European Society for Vascular Surgery.

[23]  Jongeun Choi,et al.  Association of Intraluminal Thrombus, Hemodynamic Forces, and Abdominal Aortic Aneurysm Expansion Using Longitudinal CT Images , 2016, Annals of Biomedical Engineering.

[24]  Eun-Ah Park,et al.  Interaction of expanding abdominal aortic aneurysm with surrounding tissue: Retrospective CT image studies. , 2015, Journal of nature and science.

[25]  S Baek,et al.  On growth measurements of abdominal aortic aneurysms using maximally inscribed spheres. , 2015, Medical engineering & physics.

[26]  John S. Wilson,et al.  A Computational Model of Biochemomechanical Effects of Intraluminal Thrombus on the Enlargement of Abdominal Aortic Aneurysms , 2015, Annals of Biomedical Engineering.

[27]  Sergey Ioffe,et al.  Batch Normalization: Accelerating Deep Network Training by Reducing Internal Covariate Shift , 2015, ICML.

[28]  Dumitru Erhan,et al.  Going deeper with convolutions , 2014, 2015 IEEE Conference on Computer Vision and Pattern Recognition (CVPR).

[29]  Shawn C Shadden,et al.  A longitudinal comparison of hemodynamics and intraluminal thrombus deposition in abdominal aortic aneurysms. , 2014, American journal of physiology. Heart and circulatory physiology.

[30]  M. LeFevre Screening for Abdominal Aortic Aneurysm: U.S. Preventive Services Task Force Recommendation Statement , 2014, Annals of Internal Medicine.

[31]  Nitish Srivastava,et al.  Dropout: a simple way to prevent neural networks from overfitting , 2014, J. Mach. Learn. Res..

[32]  T Christian Gasser,et al.  Multidimensional growth measurements of abdominal aortic aneurysms. , 2013, Journal of vascular surgery.

[33]  M J Buxton,et al.  Systematic review and meta-analysis of the growth and rupture rates of small abdominal aortic aneurysms: implications for surveillance intervals and their cost-effectiveness. , 2013, Health technology assessment.

[34]  J D Humphrey,et al.  Biochemomechanics of intraluminal thrombus in abdominal aortic aneurysms. , 2013, Journal of biomechanical engineering.

[35]  Jongeun Choi,et al.  Growth prediction of abdominal aortic aneurysms and its association of intraluminal thrombus , 2013 .

[36]  S. Haulon,et al.  Management of abdominal aortic aneurysms clinical practice guidelines of the European society for vascular surgery. , 2011, European journal of vascular and endovascular surgery : the official journal of the European Society for Vascular Surgery.

[37]  Monica M Dua,et al.  Hemodynamic influences on abdominal aortic aneurysm disease: Application of biomechanics to aneurysm pathophysiology. , 2010, Vascular pharmacology.

[38]  Yoshua Bengio,et al.  Understanding the difficulty of training deep feedforward neural networks , 2010, AISTATS.

[39]  Charles A. Taylor,et al.  Quantification of Hemodynamics in Abdominal Aortic Aneurysms During Rest and Exercise Using Magnetic Resonance Imaging and Computational Fluid Dynamics , 2010, Annals of Biomedical Engineering.

[40]  F. N. van de Vosse,et al.  The mechanical role of thrombus on the growth rate of an abdominal aortic aneurysm. , 2010, Journal of vascular surgery.

[41]  M. Vega de Céniga,et al.  Growth rate and associated factors in small abdominal aortic aneurysms. , 2006, European journal of vascular and endovascular surgery : the official journal of the European Society for Vascular Surgery.

[42]  Simon G. Thompson,et al.  Abdominal Aortic Aneurysm Expansion: Risk Factors and Time Intervals for Surveillance , 2004, Circulation.

[43]  M. Olufsen,et al.  Numerical Simulation and Experimental Validation of Blood Flow in Arteries with Structured-Tree Outflow Conditions , 2000, Annals of Biomedical Engineering.

[44]  J. Bloomenthal Calculation of reference frames along a space curve , 1990 .