论文信息 - Implementation of Nussinov's RNA Folding Using the Kokkos Library - 字舞流文

Implementation of Nussinov's RNA Folding Using the Kokkos Library

Marek Palkowski | Mateusz Gruzewski

[1] Jerrold R. Griggs,et al. Algorithms for Loop Matchings , 1978 .

[2] Sartaj Sahni,et al. Cache and energy efficient algorithms for Nussinov’s RNA Folding , 2017, BMC Bioinformatics.

[3] Daniel Sunderland,et al. Kokkos: Enabling manycore performance portability through polymorphic memory access patterns , 2014, J. Parallel Distributed Comput..

[4] Marek Palkowski,et al. Parallel tiled Nussinov RNA folding loop nest generated using both dependence graph transitive closure and loop skewing , 2017, BMC Bioinformatics.