Robust ANOVA for microarray data

[1]  H. F. Gollob,et al.  A statistical model which combines features of factor analytic and analysis of variance techniques , 1968, Psychometrika.

[2]  Ronald L. Iman.  A power study of a rank transform for the two‐way classification model when interaction may be present , 1974 .

[3]  J. Gower.  Generalized procrustes analysis , 1975 .

[4]  F. Mosteller,et al.  Data Analysis and Regression , 1978 .

[5]  R. Iman,et al.  Rank Transformations as a Bridge between Parametric and Nonparametric Statistics , 1981 .

[6]  J. J. Higgins,et al.  Limitations of the rank transform statistic in tests for interactions , 1987 .

[7]  Hugh G. Gauch,et al.  Statistical Analysis of a Yield Trial , 1988 .

[8]  Michael R. Harwell,et al.  A Nonparametric Test Statistic for the General Linear Model , 1989 .

[9]  S. Stigler.  Citation Patterns in the Journals of Statistics and Probability , 1994 .

[10]  Angela M. Dean,et al.  Rank‐based test procedures for interaction in the two‐way layout with one observation per cell , 1999 .

[11]  S. P. Fodor,et al.  High density synthetic oligonucleotide arrays , 1999, Nature Genetics.

[12]  Gary A. Churchill,et al.  Analysis of Variance for Gene Expression Microarray Data , 2000, J. Comput. Biol..

[13]  M. Ashburner,et al.  Gene Ontology: tool for the unification of biology , 2000, Nature Genetics.

[14]  Pierre R. Bushel,et al.  Assessing Gene Significance from cDNA Microarray Expression Data via Mixed Models , 2001, J. Comput. Biol..

[15]  Martin Vingron,et al.  Variance stabilization applied to microarray data calibration and to the quantification of differential expression , 2002, ISMB.

[16]  G A Whitmore,et al.  Models for microarray gene expression data , 2002, Journal of biopharmaceutical statistics.

[17]  Ben Adler,et al.  Genomic Scale Analysis of Pasteurella multocida Gene Expression during Growth within the Natural Chicken Host , 2002, Infection and Immunity.

[18]  Russ B. Altman,et al.  Nonparametric methods for identifying differentially expressed genes in microarray data , 2002, Bioinform..

[19]  Douglas M. Hawkins,et al.  A variance-stabilizing transformation for gene-expression microarray data , 2002, ISMB.

[20]  David M. Rocke,et al.  Transformation and normalization of oligonucleotide microarray data , 2003, Bioinform..

[21]  Wei Pan,et al.  Modified Nonparametric Approaches to Detecting Differentially Expressed Genes in Replicated Microarray Experiments , 2003, Bioinform..

[22]  X. Cui,et al.  Transformations for cDNA Microarray Data , 2003, Statistical applications in genetics and molecular biology.

[23]  N. Jørgensen,et al.  Dexamethasone, BMP-2, and 1,25-dihydroxyvitamin D enhance a more differentiated osteoblast phenotype: validation of an in vitro model for human bone marrow-derived primary osteoblasts , 2004, Steroids.

[24]  Mia Hubert,et al.  Robust PCA and classification in biosciences , 2004, Bioinform..

[25]  Sahadevan Raman,et al.  Transcription Regulation by the Mycobacterium tuberculosis Alternative Sigma Factor SigD and Its Role in Virulence , 2004, Journal of bacteriology.

[26]  Purvesh Khatri,et al.  Ontological analysis of gene expression data: current tools, limitations, and open problems , 2005, Bioinform..

[27]  Karen Schlauch,et al.  Cytosolic Ascorbate Peroxidase 1 Is a Central Component of the Reactive Oxygen Gene Network of Arabidopsisw⃞ , 2005, The Plant Cell Online.

[28]  Xin Gao,et al.  Nonparametric tests for differential gene expression and interaction effects in multi-factorial microarray experiments , 2005, BMC Bioinformatics.

[29]  Hongyue Dai,et al.  Rosetta error model for gene expression analysis , 2006, Bioinform..

[30]  Christopher D. Brown,et al.  Receiver operating characteristics curves and related decision measures: A tutorial , 2006 .

[31]  Lutgarde M. C. Buydens,et al.  Interpretation of ANOVA models for microarray data using PCA , 2007, Bioinform..

[32]  Robert Gentleman,et al.  Using GOstats to test gene lists for GO term association , 2007, Bioinform..

[33]  H.R.M.J. Wehrens,et al.  Beyond single p-value cut-offs: Methods to improve decision making in GO enrichment analysis of microarray experiments , 2010 .