Semiautomated Ventilation Defect Quantification in Exercise-induced Bronchoconstriction Using Hyperpolarized Helium-3 Magnetic Resonance Imaging: A Repeatability Study.

RATIONALE AND OBJECTIVES This study aimed to compare the performance of a semiautomated ventilation defect segmentation approach, adaptive K-means, with manual segmentation of hyperpolarized helium-3 magnetic resonance imaging in subjects with exercise-induced bronchoconstriction (EIB). MATERIALS AND METHODS Six subjects with EIB underwent hyperpolarized helium-3 magnetic resonance imaging and spirometry tests at baseline, post exercise, and recovery over two separate visits. Ventilation defects were analyzed by two methods. First, two independent readers manually segmented ventilation defects. Second, defects were quantified by an adaptive K-means method that corrected for coil sensitivity, applied a vesselness filter to estimate pulmonary vasculature, and segmented defects adaptively based on the overall low-intensity signals in the lungs. These two methods were then compared in four aspects: (1) ventilation defect percent (VDP) measurements, (2) correlation between spirometric measures and measured VDP, (3) regional VDP variations pre- and post exercise challenge, and (4) Dice coefficient for spatial agreement. RESULTS The adaptive K-means method was ~5 times faster, and the measured VDP bias was under 2%. The correlation between predicted forced expiratory volume in 1 second over forced vital capacity and VDP measured by adaptive K-means (ρ = -0.64, P <0.0001) and by the manual method (ρ = -0.63, P <0.0001) yielded almost identical 95% confidence intervals. Neither method of measuring VDP indicated apical/basal or anterior dependence in this small study cohort. CONCLUSIONS Compared to the manual method, the adaptive K-means method provided faster, reproducible, comparable measures of VDP in EIB and may be applied to a variety of lung diseases.

[1]  J. Gee,et al.  Ventilation‐based segmentation of the lungs using hyperpolarized 3He MRI , 2011, Journal of magnetic resonance imaging : JMRI.

[2]  Brian B. Avants,et al.  N4ITK: Improved N3 Bias Correction , 2010, IEEE Transactions on Medical Imaging.

[3]  Miranda Kirby,et al.  Development and application of methods to quantify spatial and temporal hyperpolarized 3He MRI ventilation dynamics: preliminary results in chronic obstructive pulmonary disease , 2010, Medical Imaging.

[4]  Fern M. Cheek,et al.  American Thoracic Society Documents An Official American Thoracic Society Clinical Practice Guideline : Exercise-induced Bronchoconstriction , 2013 .

[5]  Arno Klein,et al.  A reproducible evaluation of ANTs similarity metric performance in brain image registration , 2011, NeuroImage.

[6]  Austin Reno,et al.  Using hyperpolarized 3He MRI to evaluate treatment efficacy in cystic fibrosis patients , 2011, Journal of magnetic resonance imaging : JMRI.

[7]  J L Hankinson,et al.  Spirometric reference values from a sample of the general U.S. population. , 1999, American journal of respiratory and critical care medicine.

[8]  Eduard E de Lange,et al.  MRI of the lungs using hyperpolarized noble gases , 2002, Magnetic resonance in medicine.

[9]  Miranda Kirby,et al.  Hyperpolarized 3He magnetic resonance functional imaging semiautomated segmentation. , 2012, Academic radiology.

[10]  N. Otsu A threshold selection method from gray level histograms , 1979 .

[11]  Alejandro F. Frangi,et al.  Model-based quantitation of 3-D magnetic resonance angiographic images , 1999, IEEE Transactions on Medical Imaging.

[12]  L G Nyúl,et al.  On standardizing the MR image intensity scale , 1999, Magnetic resonance in medicine.

[13]  H C Charles,et al.  Cystic fibrosis: combined hyperpolarized 3He-enhanced and conventional proton MR imaging in the lung--preliminary observations. , 1999, Radiology.

[14]  J. Mugler,et al.  Changes in regional airflow obstruction over time in the lungs of patients with asthma: evaluation with 3He MR imaging. , 2009, Radiology.

[15]  R Core Team,et al.  R: A language and environment for statistical computing. , 2014 .

[16]  Stanley J Kruger,et al.  Exercise-induced bronchoconstriction: reproducibility of hyperpolarized 3He MR imaging. , 2013, Radiology.

[17]  Jan Wolber,et al.  Quantitative analysis of hyperpolarized 129Xe ventilation imaging in healthy volunteers and subjects with chronic obstructive pulmonary disease , 2013, NMR in biomedicine.

[18]  Scott T. Acton,et al.  Merging parametric active contours within homogeneous image regions for MRI-based lung segmentation , 2003, IEEE Transactions on Medical Imaging.

[19]  Stanley J Kruger,et al.  Hyperpolarized Helium‐3 MRI of exercise‐induced bronchoconstriction during challenge and therapy , 2014, Journal of magnetic resonance imaging : JMRI.

[20]  T A Altes,et al.  Hyperpolarized 3He MR lung ventilation imaging in asthmatics: Preliminary findings , 2001, Journal of magnetic resonance imaging : JMRI.

[21]  P. Reix,et al.  Hyperpolarized 3He MR for sensitive imaging of ventilation function and treatment efficiency in young cystic fibrosis patients with normal lung function. , 2010, Radiology.

[22]  Jim M. Wild,et al.  Assessment of lung disease in children with cystic fibrosis using hyperpolarized 3-Helium MRI: comparison with Shwachman score, Chrispin-Norman score and spirometry , 2007, European Radiology.

[23]  Edwin J R van Beek,et al.  Combined helium‐3/proton magnetic resonance imaging measurement of ventilated lung volumes in smokers compared to never‐smokers , 2005, Journal of magnetic resonance imaging : JMRI.

[24]  Rohan S. Virgincar,et al.  Extending semiautomatic ventilation defect analysis for hyperpolarized (129)Xe ventilation MRI. , 2014, Academic radiology.

[25]  Aaron Fenster,et al.  Globally optimal co-segmentation of three-dimensional pulmonary 1H and hyperpolarized 3He MRI with spatial consistence prior , 2015, Medical Image Anal..

[26]  D. Altman,et al.  Agreement Between Methods of Measurement with Multiple Observations Per Individual , 2007, Journal of biopharmaceutical statistics.

[27]  Daniel Rueckert,et al.  Nonrigid registration using free-form deformations: application to breast MR images , 1999, IEEE Transactions on Medical Imaging.

[28]  J. Haukoos,et al.  Advanced statistics: bootstrapping confidence intervals for statistics with "difficult" distributions. , 2005, Academic emergency medicine : official journal of the Society for Academic Emergency Medicine.

[29]  G. Parraga,et al.  Hyperpolarized ³He magnetic resonance imaging: preliminary evaluation of phenotyping potential in chronic obstructive pulmonary disease. , 2011, European journal of radiology.

[30]  W. Busse,et al.  Evaluation of structure-function relationships in asthma using multidetector CT and hyperpolarized He-3 MRI. , 2008, Academic radiology.

[31]  G. Parraga,et al.  Ventilation heterogeneity in ex-smokers without airflow limitation. , 2015, Academic radiology.