Integrative transcriptome-wide analyses reveal critical HER2-regulated mRNAs and lincRNAs in HER2+ breast cancer
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L. Harris | A. Khalil | S. McMahon | Callie R. Merry | K. Miskimen | C. Thompson | S. Mcmahon | Callie R. Merry | Kristy L. S. Miskimen | Sarah Mcmahon
[1] S. Dhanasekaran,et al. The landscape of long noncoding RNAs in the human transcriptome , 2015, Nature Genetics.
[2] C. Shaw,et al. Pathway-Centric Integrative Analysis Identifies RRM2 as a Prognostic Marker in Breast Cancer Associated with Poor Survival and Tamoxifen Resistance123 , 2014, Neoplasia.
[3] K. Morris,et al. The rise of regulatory RNA , 2014, Nature Reviews Genetics.
[4] D. Reinberg,et al. Interactions between JARID2 and noncoding RNAs regulate PRC2 recruitment to chromatin. , 2014, Molecular cell.
[5] A. Fatica,et al. Long non-coding RNAs: new players in cell differentiation and development , 2013, Nature Reviews Genetics.
[6] Michael Morse,et al. Multiple knockout mouse models reveal lincRNAs are required for life and brain development , 2013, eLife.
[7] Sarah Geisler,et al. RNA in unexpected places: long non-coding RNA functions in diverse cellular contexts , 2013, Nature Reviews Molecular Cell Biology.
[8] Joshua M. Stuart,et al. The Cancer Genome Atlas Pan-Cancer analysis project , 2013, Nature Genetics.
[9] K. Palczewski,et al. Evolutionarily conserved long intergenic non-coding RNAs in the eye. , 2013, Human molecular genetics.
[10] Philip D. Gregory,et al. Translating Dosage Compensation to Trisomy 21 , 2013, Nature.
[11] D. Bartel,et al. lincRNAs: Genomics, Evolution, and Mechanisms , 2013, Cell.
[12] Eda Yildirim,et al. Xist RNA Is a Potent Suppressor of Hematologic Cancer in Mice , 2013, Cell.
[13] Manolis Kellis,et al. The tissue-specific lncRNA Fendrr is an essential regulator of heart and body wall development in the mouse. , 2013, Developmental cell.
[14] Steven J. M. Jones,et al. Comprehensive molecular portraits of human breast tumours , 2013 .
[15] R. O'Regan,et al. The HER2 Receptor in Breast Cancer: Pathophysiology, Clinical Use, and New Advances in Therapy , 2012, Chemotherapy research and practice.
[16] Piero Carninci,et al. Long non-coding antisense RNA controls Uchl1 translation through an embedded SINEB2 repeat , 2012, Nature.
[17] Steven J. M. Jones,et al. Comprehensive molecular portraits of human breast tumors , 2012, Nature.
[18] Ahmad M. Khalil,et al. Emerging functional and mechanistic paradigms of mammalian long non-coding RNAs , 2012, Nucleic acids research.
[19] David R. Kelley,et al. Differential gene and transcript expression analysis of RNA-seq experiments with TopHat and Cufflinks , 2012, Nature Protocols.
[20] Howard Y. Chang,et al. Suppression of progenitor differentiation requires the long noncoding RNA ANCR. , 2012, Genes & development.
[21] M. Schubert,et al. RNA‐directed epigenomic reprogramming—an emerging principle of a more targeted cancer therapy? , 2012, Genes, chromosomes & cancer.
[22] A. Khalil,et al. Emerging Roles for Long Non-Coding RNAs in Cancer and Neurological Disorders , 2011, Front. Gene..
[23] N. Zengi̇n,et al. What is the mechanism of progression with trastuzumab treatment--escape or resistance? , 2012, Asian Pacific journal of cancer prevention : APJCP.
[24] A. Jemal,et al. Cancer statistics, 2012 , 2012, CA: a cancer journal for clinicians.
[25] D. Bartel,et al. Conserved Function of lincRNAs in Vertebrate Embryonic Development despite Rapid Sequence Evolution , 2011, Cell.
[26] S. Miyano,et al. Long noncoding RNA HOTAIR regulates polycomb-dependent chromatin modification and is associated with poor prognosis in colorectal cancers. , 2011, Cancer research.
[27] D. Cacchiarelli,et al. A Long Noncoding RNA Controls Muscle Differentiation by Functioning as a Competing Endogenous RNA , 2011, Cell.
[28] Howard Y. Chang,et al. Molecular mechanisms of long noncoding RNAs. , 2011, Molecular cell.
[29] Cole Trapnell,et al. Integrative annotation of human large intergenic noncoding RNAs reveals global properties and specific subclasses. , 2011, Genes & development.
[30] J. Rinn,et al. lincRNAs act in the circuitry controlling pluripotency and differentiation , 2011, Nature.
[31] Ahmad M Khalil,et al. RNA-protein interactions in human health and disease. , 2011, Seminars in cell & developmental biology.
[32] Howard Y. Chang,et al. Long noncoding RNAs and human disease. , 2011, Trends in cell biology.
[33] John S Mattick,et al. Long noncoding RNAs in cell biology. , 2011, Seminars in cell & developmental biology.
[34] Howard Y. Chang,et al. A long noncoding RNA maintains active chromatin to coordinate homeotic gene expression , 2011, Nature.
[35] Haiyang Xie,et al. Overexpression of Long Non-coding RNA HOTAIR Predicts Tumor Recurrence in Hepatocellular Carcinoma Patients Following Liver Transplantation , 2011, Annals of Surgical Oncology.
[36] J. Rinn,et al. Large intergenic non-coding RNA-RoR modulates reprogramming of human induced pluripotent stem cells , 2010, Nature Genetics.
[37] Howard Y. Chang,et al. Long Noncoding RNA as Modular Scaffold of Histone Modification Complexes , 2010, Science.
[38] J. Rinn,et al. A Large Intergenic Noncoding RNA Induced by p53 Mediates Global Gene Repression in the p53 Response , 2010, Cell.
[39] J. Mattick,et al. Long non-coding RNAs in nervous system function and disease , 2010, Brain Research.
[40] Howard Y. Chang,et al. Long noncoding RNA HOTAIR reprograms chromatin state to promote cancer metastasis , 2010, Nature.
[41] J. Mattick,et al. Non‐coding RNAs: regulators of disease , 2010, The Journal of pathology.
[42] J. Rinn,et al. Many human large intergenic noncoding RNAs associate with chromatin-modifying complexes and affect gene expression , 2009, Proceedings of the National Academy of Sciences.
[43] J. Mattick. The Genetic Signatures of Noncoding RNAs , 2009, PLoS genetics.
[44] Michael F. Lin,et al. Chromatin signature reveals over a thousand highly conserved large non-coding RNAs in mammals , 2009, Nature.
[45] Tim R. Mercer,et al. NRED: a database of long noncoding RNA expression , 2008, Nucleic Acids Res..
[46] M. Gerstein,et al. RNA-Seq: a revolutionary tool for transcriptomics , 2009, Nature Reviews Genetics.
[47] G. Mills,et al. Genes Affecting the Cell Cycle, Growth, Maintenance, and Drug Sensitivity Are Preferentially Regulated by Anti-HER2 Antibody through Phosphatidylinositol 3-Kinase-AKT Signaling* , 2004, Journal of Biological Chemistry.
[48] Thomas D. Schmittgen,et al. Analysis of relative gene expression data using real-time quantitative PCR and the 2(-Delta Delta C(T)) Method. , 2001, Methods.