Identification of Plasmodium falciparum specific translation inhibitors from the MMV Malaria Box using a high throughput in vitro translation screen

BackgroundA major goal in the search for new anti-malarial compounds is to identify new mechanisms of action or new molecular targets. While cell-based, growth inhibition-based screening have enjoyed tremendous success, an alternative approach is to specifically assay a given pathway or essential cellular process.MethodsHere, this work describes the development of a plate-based, in vitro luciferase assay to probe for inhibitors specific to protein synthesis in Plasmodium falciparum through the use of an in vitro translation system derived from the parasite.ResultsUsing the Medicines for Malaria Venture’s Malaria Box as a pilot, 400 bioactive compounds with minimal human cytotoxicity profiles were screened, identifying eight compounds that displayed greater potency against the P. falciparum translation machinery relative to a mammalian translation system. Dose–response curves were determined in both translation systems to further characterize the top hit compound (MMV008270).ConclusionsThis assay will be useful not only in future anti-malarial screening efforts but also in the investigation of P. falciparum protein synthesis and essential processes in P. falciparum biology.

[1]  Jeremy N. Burrows,et al.  The Open Access Malaria Box: A Drug Discovery Catalyst for Neglected Diseases , 2013, PloS one.

[2]  Jennifer L. Guler,et al.  Asexual Populations of the Human Malaria Parasite, Plasmodium falciparum, Use a Two-Step Genomic Strategy to Acquire Accurate, Beneficial DNA Amplifications , 2013, PLoS pathogens.

[3]  D. Schmatz,et al.  Species-specific inhibition of fungal protein synthesis by sordarin: identification of a sordarin-specificity region in eukaryotic elongation factor 2. , 2001, Microbiology.

[4]  Peter G. Schultz,et al.  In silico activity profiling reveals the mechanism of action of antimalarials discovered in a high-throughput screen , 2008, Proceedings of the National Academy of Sciences.

[5]  Anang A. Shelat,et al.  Erratum: (+)-SJ733, a clinical candidate for malaria that acts through ATP4 to induce rapid host-mediated clearance of Plasmodium (Proceedings of the National Academy of Sciences of the United States of America (2014) 111 (E5455-E5462) 1 DOI: 10.1073/pnas.1414221111) , 2015 .

[6]  G. McConkey,et al.  Plasmodium: the developmentally regulated ribosome. , 1994, Experimental parasitology.

[7]  S. Ralph,et al.  Protein translation in Plasmodium parasites. , 2011, Trends in parasitology.

[8]  Jeffrey A Butler,et al.  Breaking Caenorhabditis elegans the easy way using the Balch homogenizer: an old tool for a new application. , 2011, Analytical biochemistry.

[9]  Kiaran Kirk,et al.  Diverse chemotypes disrupt ion homeostasis in the malaria parasite , 2014, Molecular microbiology.

[10]  F. Herrera,et al.  An in vitro system from Plasmodium falciparum active in endogenous mRNA translation. , 2000, Memorias do Instituto Oswaldo Cruz.

[11]  J. Derisi,et al.  Genome-wide regulatory dynamics of translation in the Plasmodium falciparum asexual blood stages , 2014, eLife.

[12]  David W. Gray,et al.  A novel multiple-stage antimalarial agent that inhibits protein synthesis , 2015, Nature.

[13]  Yongyuth Yuthavong,et al.  A Research Agenda for Malaria Eradication: Drugs , 2011, PLoS medicine.

[14]  Hongshen Ma,et al.  (+)-SJ733, a clinical candidate for malaria that acts through ATP4 to induce rapid host-mediated clearance of Plasmodium , 2014, Proceedings of the National Academy of Sciences.

[15]  J. Derisi,et al.  A Chemical Rescue Screen Identifies a Plasmodium falciparum Apicoplast Inhibitor Targeting MEP Isoprenoid Precursor Biosynthesis , 2014, Antimicrobial Agents and Chemotherapy.

[16]  Elizabeth A. Winzeler,et al.  Mutations in the P-Type Cation-Transporter ATPase 4, PfATP4, Mediate Resistance to Both Aminopyrazole and Spiroindolone Antimalarials , 2014, ACS chemical biology.