Bayesian Networks in Environmental Risk Assessment: A Review

Human activities both depend upon and have consequences on the environment. Environmental risk assessment (ERA) is a process of estimating the probability and consequences of human activities' and other stressors' adverse effects on the environment. Bayesian Networks (BNs) can synthesize different types of knowledge and explicitly account for the probabilities of different scenarios, therefore offering a useful tool for ERA. Their use in formal ERA practice has not been evaluated, however, despite their increasing popularity in environmental modelling. This paper reviews the use of BNs in ERA based on peer-reviewed publications. Following a systematic mapping protocol, we identified studies where BNs have been used in an environmental risk context and evaluated the scope, technical aspects, and use of the models and their results. The review shows that BNs have been applied in ERA particularly in recent years and that there is room to develop both the model implementation and participatory modeling practices. Based on this review and the authors' experience, we outline general guidelines and development ideas for using BNs in ERA. This article is protected by copyright. All rights reserved.

[1]  Bahram Malekmohammadi,et al.  Application of Bayesian networks in a hierarchical structure for environmental risk assessment: a case study of the Gabric Dam, Iran , 2018, Environmental Monitoring and Assessment.

[2]  Neal R. Haddaway,et al.  A methodology for systematic mapping in environmental sciences , 2016, Environmental Evidence.

[3]  Silvia Torresan,et al.  Reviewing Bayesian Networks potentials for climate change impacts assessment and management: A multi-risk perspective. , 2017, Journal of environmental management.

[4]  Mohammad Reza Nikoo,et al.  Developing real time operating rules for trading discharge permits in rivers: Application of Bayesian Networks , 2009, Environ. Model. Softw..

[5]  Vikram Garaniya,et al.  An ecological risk assessment model for Arctic oil spills from a subsea pipeline. , 2018, Marine pollution bulletin.

[6]  M. Gibbs,et al.  Assessing the Risk of an Aquaculture Development on Shorebirds Using a Bayesian Belief Model , 2007 .

[7]  Jeremy E. Oakley,et al.  Uncertain Judgements: Eliciting Experts' Probabilities , 2006 .

[8]  Ron Johnstone,et al.  Investigating the Use of a Bayesian Network to Model the Risk of Lyngbya majuscula Bloom Initiation in Deception Bay, Queensland, Australia , 2007 .

[9]  R. Couture,et al.  Climate change, cyanobacteria blooms and ecological status of lakes: A Bayesian network approach , 2016 .

[10]  Dawei Han,et al.  Uncertainty Assessment in Environmental Risk through Bayesian Networks , 2015 .

[11]  Glenn W. Suter,et al.  Ecological risk assessment , 2006 .

[12]  Mark E. Borsuk,et al.  A Bayesian network of eutrophication models for synthesis, prediction, and uncertainty analysis , 2004 .

[13]  H. Rittel,et al.  Dilemmas in a general theory of planning , 1973 .

[14]  Amelia Wenger,et al.  Predicting island biosecurity risk from introduced fauna using Bayesian Belief Networks. , 2017, The Science of the total environment.

[15]  Adrienne Grêt-Regamey,et al.  Facing uncertainty in ecosystem services-based resource management. , 2013, Journal of environmental management.

[16]  M. Hoff,et al.  Evaluating risk of African longfin eel (Anguilla mossambica) aquaculture in Michigan, USA, using a Bayesian belief network of freshwater fish invasion , 2018 .

[17]  Adrian C. Newton,et al.  Bayesian Belief Networks as a tool for evidence-based conservation management , 2007 .

[18]  Kevin B. Korb,et al.  Parameterisation and evaluation of a Bayesian network for use in an ecological risk assessment , 2007, Environ. Model. Softw..

[19]  K. S. McDonald,et al.  An ecological risk assessment for managing and predicting trophic shifts in estuarine ecosystems using a Bayesian network , 2016, Environ. Model. Softw..

[20]  Prue F. E. Addison,et al.  Practical solutions for making models indispensable in conservation decision‐making , 2013 .

[21]  Alberto Garcia-Prats,et al.  Hydrology-oriented forest management trade-offs. A modeling framework coupling field data, simulation results and Bayesian Networks. , 2018, The Science of the total environment.

[22]  E. B. Andersen,et al.  Information Science and Statistics , 1986 .

[23]  E. Ostrom A General Framework for Analyzing Sustainability of Social-Ecological Systems , 2009, Science.

[24]  Kris Van Looy,et al.  Unravelling River System Impairments in Stream Networks with an Integrated Risk Approach , 2015, Environmental Management.

[25]  Mingsheng Shang,et al.  Application of Bayesian network including Microcystis morphospecies for microcystin risk assessment in three cyanobacterial bloom-plagued lakes, China. , 2019, Harmful algae.

[26]  K. Longva,et al.  Environmental risk assessment of white phosphorus from the use of munitions - a probabilistic approach. , 2010, The Science of the total environment.

[27]  Alan Blackburn,et al.  Modelling gross margins and potential N exports from cropland in south-eastern Australia , 2013 .

[28]  Howard Raiffa,et al.  Applied Statistical Decision Theory. , 1961 .

[29]  Anthony J. Jakeman,et al.  Environmental decision support systems (EDSS) development - Challenges and best practices , 2011, Environ. Model. Softw..

[30]  Yan Zhang,et al.  Risk assessment of forest landscape degradation using Bayesian network modeling in the Miyun Reservoir catchment (China) with emphasis on the Beijing–Tianjin sandstorm source control program , 2018, Land Degradation & Development.

[31]  Clement Atzberger,et al.  Ensemble approach for potential habitat mapping of invasive Prosopis spp. in Turkana, Kenya , 2018, Ecology and evolution.

[32]  Melissa L. Finucane,et al.  Risk as Analysis and Risk as Feelings: Some Thoughts about Affect, Reason, Risk, and Rationality , 2004, Risk analysis : an official publication of the Society for Risk Analysis.

[33]  Jeffrey A. Soller,et al.  An integrated environmental modeling framework for performing Quantitative Microbial Risk Assessments , 2014, Environ. Model. Softw..

[34]  C. Pollino,et al.  Bayesian Networks as a screening tool for exposure assessment. , 2013, Journal of environmental management.

[35]  Bruce G. Marcot,et al.  Advances in Bayesian network modelling: Integration of modelling technologies , 2019, Environ. Model. Softw..

[36]  Finn Verner Jensen,et al.  Bayesian Networks and Influence Diagrams , 1997 .

[37]  Laura Uusitalo,et al.  Advantages and challenges of Bayesian networks in environmental modelling , 2007 .

[38]  Brian Veitch,et al.  Arctic marine fish 'biotransformation toxicity' model for ecological risk assessment. , 2019, Marine pollution bulletin.

[39]  Heidi Christiansen Barlebo,et al.  Reflections on the use of Bayesian belief networks for adaptive management. , 2008, Journal of environmental management.

[40]  Zengkai Liu,et al.  Implications of using chemical dispersants to combat oil spills in the German Bight - Depiction by means of a Bayesian network. , 2019, Environmental pollution.

[41]  O. Varis,et al.  DAVID influence diagram processing system in environmental management , 1988 .

[42]  John Bromley,et al.  Bayesian belief networks as a tool for participatory integrated assessment and adaptive groundwater management: the Upper Guadiana Basin, Spain , 2007 .

[43]  Thomas Baumgartl,et al.  Quantifying rehabilitation risks for surface‐strip coal mines using a soil compaction Bayesian network in South Africa and Australia: To demonstrate the R2AIN Framework , 2019, Integrated environmental assessment and management.

[44]  Simo Sarkki,et al.  Catching the future: Applying Bayesian belief networks to exploratory scenario storylines to assess long‐term changes in Baltic herring ( Clupea harengus membras, Clupeidae) and salmon ( Salmo salar, Salmonidae) fisheries , 2020, Fish and Fisheries.

[45]  Mark R Wiesner,et al.  The use of Bayesian networks for nanoparticle risk forecasting: model formulation and baseline evaluation. , 2012, The Science of the total environment.

[46]  C Sierra,et al.  Developing a new Bayesian Risk Index for risk evaluation of soil contamination. , 2017, The Science of the total environment.

[47]  John F Carriger,et al.  Minimizing risks from spilled oil to ecosystem services using influence diagrams: the Deepwater Horizon spill response. , 2011, Environmental science & technology.

[48]  Daniel Krewski,et al.  Risk Management Frameworks for Human Health and Environmental Risks , 2003, Journal of toxicology and environmental health. Part B, Critical reviews.

[49]  Maria Hänninen,et al.  A probabilistic approach for a cost-benefit analysis of oil spill management under uncertainty: A Bayesian network model for the Gulf of Finland. , 2015, Journal of environmental management.

[50]  Paul Slovic,et al.  Numbers and Nerves:Toward an Affective Apprehension of Environmental Risk , 2013 .

[51]  Mark E. Borsuk,et al.  Assessing the decline of brown trout (Salmo trutta) in Swiss rivers using a Bayesian probability network , 2006 .

[52]  Janina Kleemann,et al.  Validation approaches of an expert-based Bayesian Belief Network in Northern Ghana, West Africa , 2017 .

[53]  Ari Jolma,et al.  Species and habitats in danger: estimating the relative risk posed by oil spills in the northern Baltic Sea , 2016 .

[54]  Carmel Pollino,et al.  Increased Use of Bayesian Network Models Will Improve Ecological Risk Assessments , 2008 .

[55]  R. Gregory,et al.  Creating policy alternatives using stakeholder values , 1994 .

[56]  M. Burgman Risks and Decisions for Conservation and Environmental Management: Experts, stakeholders and elicitation , 2005 .

[57]  Serena H. Chen,et al.  Good practice in Bayesian network modelling , 2012, Environ. Model. Softw..

[58]  Xiaofeng Hu,et al.  A probabilistic analysis model of oil pipeline accidents based on an integrated Event-Evolution-Bayesian (EEB) model , 2018, Process Safety and Environmental Protection.

[59]  Mary C. Hill,et al.  Integrated environmental modeling: A vision and roadmap for the future , 2013, Environ. Model. Softw..

[60]  David N. Barton,et al.  Bayesian belief networks as a meta-modelling tool in integrated river basin management -- Pros and cons in evaluating nutrient abatement decisions under uncertainty in a Norwegian river basin , 2008 .

[61]  James J. Roberts,et al.  Fragmentation and thermal risks from climate change interact to affect persistence of native trout in the Colorado River basin , 2013, Global change biology.

[62]  Steven Broekx,et al.  Evaluation and comparison of data-driven and knowledge-supported Bayesian Belief Networks to assess the habitat suitability for alien macroinvertebrates , 2015, Environ. Model. Softw..

[63]  Sandra Johnson,et al.  Bayesian networks in environmental and resource management , 2012, Integrated environmental assessment and management.

[64]  Karen Fisher,et al.  Improving ecosystem service frameworks to address wicked problems , 2015 .

[65]  Pérez-MiñanaElena Improving ecosystem services modelling , 2016 .

[66]  Daniel Zelterman,et al.  Bayesian Artificial Intelligence , 2005, Technometrics.

[67]  Wayne G Landis,et al.  Evaluating nonindigenous species management in a Bayesian networks derived relative risk framework for Padilla Bay, WA, USA. , 2015, Integrated environmental assessment and management.

[68]  Holger R. Maier,et al.  Future research challenges for incorporation of uncertainty in environmental and ecological decision-making , 2008 .

[69]  Steven Broekx,et al.  A review of Bayesian belief networks in ecosystem service modelling , 2013, Environ. Model. Softw..

[70]  John F Carriger,et al.  Influence diagrams as decision-making tools for pesticide risk management. , 2012, Integrated environmental assessment and management.

[71]  John F Carriger,et al.  Representing causal knowledge in environmental policy interventions: Advantages and opportunities for qualitative influence diagram applications , 2018, Integrated environmental assessment and management.

[72]  R. Pressey,et al.  Assessing interactions of multiple stressors when data are limited: A Bayesian belief network applied to coral reefs , 2014 .

[73]  Kara Morgan,et al.  Development of a Preliminary Framework for Informing the Risk Analysis and Risk Management of Nanoparticles , 2005, Risk analysis : an official publication of the Society for Risk Analysis.

[74]  Craig A. Stow,et al.  Comparative analysis of discretization methods in Bayesian networks , 2017, Environ. Model. Softw..

[75]  S. Lauritzen The EM algorithm for graphical association models with missing data , 1995 .

[76]  Paulo Branco,et al.  Predicting the ecological status of rivers and streams under different climatic and socioeconomic scenarios using Bayesian Belief Networks , 2020, Limnologica.

[77]  Elena Pérez-Miñana,et al.  Improving ecosystem services modelling: Insights from a Bayesian network tools review , 2016, Environ. Model. Softw..

[78]  K. Reckhow,et al.  Validation and sensitivity of the FINE Bayesian network for forecasting aquatic exposure to nano-silver. , 2014, The Science of the total environment.

[79]  Wayne G Landis,et al.  Using the Bayesian network relative risk model risk assessment process to evaluate management alternatives for the South River and upper Shenandoah River, Virginia. , 2017, Integrated environmental assessment and management.

[80]  T. Done,et al.  Excess seawater nutrients, enlarged algal symbiont densities and bleaching sensitive reef locations: 2. A regional-scale predictive model for the Great Barrier Reef, Australia. , 2017, Marine pollution bulletin.

[81]  Wayne G Landis,et al.  Analysis of Regional Scale Risk of Whirling Disease in Populations of Colorado and Rio Grande Cutthroat Trout Using a Bayesian Belief Network Model , 2014, Risk analysis : an official publication of the Society for Risk Analysis.

[82]  Floris Goerlandt,et al.  A Bayesian Network risk model for assessing oil spill recovery effectiveness in the ice-covered Northern Baltic Sea. , 2019, Marine pollution bulletin.

[83]  Diane Henshel,et al.  Parameterization Framework and Quantification Approach for Integrated Risk and Resilience Assessments , 2020, Integrated environmental assessment and management.

[84]  Eleanor E Hines,et al.  Regional risk assessment of the Puyallup River Watershed and the evaluation of low impact development in meeting management goals , 2014, Integrated environmental assessment and management.

[85]  Maria Hänninen,et al.  A Cross-disciplinary Approach to Minimising the Risks of Maritime Transport in the Gulf of Finland , 2009 .

[86]  Wayne G Landis,et al.  The multiple stressor ecological risk assessment for the mercury‐contaminated South River and upper Shenandoah River using the Bayesian network‐relative risk model , 2017, Integrated environmental assessment and management.

[87]  Oz Sahin,et al.  Applications of Bayesian belief networks in water resource management: A systematic review , 2016, Environ. Model. Softw..

[88]  Iadine Chadès,et al.  Buffel grass and climate change: a framework for projecting invasive species distributions when data are scarce , 2015, Biological Invasions.

[89]  Laurence T. Kell,et al.  The value of Information in fisheries management: North Sea herring as an example , 2009 .

[90]  T. Sun,et al.  Bayesian networks for environmental flow decision-making and an application in the Yellow River estuary, China , 2013 .

[91]  Daniel E. Schindler,et al.  Prediction, precaution, and policy under global change , 2015, Science.

[92]  Antonio Salmerón,et al.  Continuous Bayesian networks for probabilistic environmental risk mapping , 2016, Stochastic Environmental Research and Risk Assessment.

[93]  B. Reilly,et al.  A road map for developing and applying object-oriented bayesian networks to “WICKED” problems , 2017 .

[94]  Sakari Kuikka,et al.  Joint use of multiple environmental assessment models by a Bayesian meta-model: the Baltic salmon case , 1997 .

[95]  David Rissik,et al.  Identifying habitats at risk: simple models can reveal complex ecosystem dynamics. , 2015, Ecological applications : a publication of the Ecological Society of America.

[96]  J. David Allan,et al.  Investigating the relationships between environmental stressors and stream condition using Bayesian belief networks , 2012 .

[97]  K S McDonald,et al.  Developing best-practice Bayesian Belief Networks in ecological risk assessments for freshwater and estuarine ecosystems: a quantitative review. , 2015, Journal of environmental management.

[98]  K. Mengersen,et al.  Eliciting Expert Knowledge in Conservation Science , 2012, Conservation biology : the journal of the Society for Conservation Biology.

[99]  Norman Fenton,et al.  Risk Assessment and Decision Analysis with Bayesian Networks , 2012 .

[100]  Tara G Martin,et al.  A guide to eliciting and using expert knowledge in Bayesian ecological models. , 2010, Ecology letters.

[101]  Kevin B. Korb,et al.  Bayesian Artificial Intelligence, Second Edition , 2010 .

[102]  Ronny Fredriksson,et al.  Evaluating complex relationships between ecological indicators and environmental factors in the Baltic Sea: A machine learning approach , 2019, Ecological Indicators.

[103]  Rafael Rumí,et al.  Bayesian networks in environmental modelling , 2011, Environ. Model. Softw..

[104]  Maria Hänninen,et al.  A Bayesian network for assessing the collision induced risk of an oil accident in the Gulf of Finland. , 2015, Environmental science & technology.

[105]  John F Carriger,et al.  Bayesian Networks Improve Causal Environmental Assessments for Evidence-Based Policy. , 2016, Environmental science & technology.

[106]  Inari Helle,et al.  A software system for assessing the spatially distributed ecological risk posed by oil shipping , 2014, Environ. Model. Softw..

[107]  Gregory A. Kiker,et al.  Using the integrated ecosystem assessment framework to build consensus and transfer information to managers , 2014 .

[108]  Simon Clavaguera,et al.  A nanomaterial release model for waste shredding using a Bayesian belief network , 2018, Journal of Nanoparticle Research.

[109]  Thomas J. Danielson,et al.  Predicting stream vulnerability to urbanization stress with Bayesian network models , 2018 .

[110]  Pejman Tahmasebi,et al.  Risk of fire occurrence in arid and semi-arid ecosystems of Iran: an investigation using Bayesian belief networks , 2016, Environmental Monitoring and Assessment.

[111]  Song S. Qian,et al.  A continuous variable Bayesian networks model for water quality modeling: A case study of setting nitrogen criterion for small rivers and streams in Ohio, USA , 2015, Environ. Model. Softw..

[112]  P. Kareiva,et al.  Ecosystem services , 2005, Current Biology.

[113]  J. F. Carriger,et al.  A Bayesian network approach to refining ecological risk assessments: Mercury and the Florida panther (Puma concolor coryi). , 2020, Ecological modelling.

[114]  M Brugnach,et al.  More is not always better: coping with ambiguity in natural resources management. , 2011, Journal of environmental management.

[115]  Robert Aps,et al.  Oil accident response simulation: allocation of potential places of refuge , 2009 .

[116]  J. Grundmann,et al.  An integrated approach to conceptualise hydrological and socio-economic interaction for supporting management decisions of coupled groundwater–agricultural systems , 2014, Environmental Earth Sciences.

[117]  K. Reckhow Water quality prediction and probability network models , 1999 .

[118]  Roger M. Cooke,et al.  Expert judgement for dependence in probabilistic modelling: A systematic literature review and future research directions , 2017, Eur. J. Oper. Res..

[119]  Karl I. Gjerstad,et al.  Uncertainty in environmental impact assessment predictions: the need for better communication and more transparency , 2006 .

[120]  Hans Jørgen Henriksen,et al.  Use of Bayesian belief networks for dealing with ambiguity in integrated groundwater management , 2012, Integrated environmental assessment and management.

[121]  Judea Pearl,et al.  Fusion, Propagation, and Structuring in Belief Networks , 1986, Artif. Intell..

[122]  Wayne G. Landis,et al.  A Bayesian Approach to Landscape Ecological Risk Assessment Applied to the Upper Grande Ronde Watershed, Oregon , 2012 .

[123]  Anders L. Madsen,et al.  Development of a hybrid Bayesian network model for predicting acute fish toxicity using multiple lines of evidence , 2019, bioRxiv.

[124]  Barry T. Hart,et al.  A Bayesian network approach to support environmental flow restoration decisions in the Yarra River, Australia , 2013, Stochastic Environmental Research and Risk Assessment.

[125]  D PhanThuc,et al.  Applications of Bayesian belief networks in water resource management , 2016 .

[126]  S. Kuikka,et al.  Modeling the effectiveness of oil combating from an ecological perspective--a Bayesian network for the Gulf of Finland; the Baltic Sea. , 2011, Journal of hazardous materials.

[127]  Nadia Carluer,et al.  ARPEGES: A Bayesian Belief Network to Assess the Risk of Pesticide Contamination for the River Network of France , 2020, Integrated environmental assessment and management.

[128]  Rosa F. Ropero,et al.  Regression using hybrid Bayesian networks: Modelling landscape-socioeconomy relationships , 2014, Environ. Model. Softw..

[129]  Javad Barabady,et al.  Dynamic Bayesian Network-Based Risk Assessment for Arctic Offshore Drilling Waste Handling Practices , 2016 .

[130]  P. Kujala,et al.  A probabilistic model estimating oil spill clean-up costs--a case study for the Gulf of Finland. , 2013, Marine pollution bulletin.

[131]  B. Marcot,et al.  Using Bayesian belief networks in adaptive management , 2006 .

[132]  Vinh V. Thai,et al.  Expert elicitation and Bayesian Network modeling for shipping accidents: A literature review , 2016 .

[133]  R. V. van Dam,et al.  Quantitative Ecological Risk Assessment of the Magela Creek Floodplain in Kakadu National Park, Australia: Comparing Point Source Risks from the Ranger Uranium Mine to Diffuse Landscape-Scale Risks , 2012 .

[134]  Tuuli Parviainen,et al.  Risk frames and multiple ways of knowing: Coping with ambiguity in oil spill risk governance in the Norwegian Barents Sea , 2019, Environmental Science & Policy.

[135]  Kerrie Mengersen,et al.  Managing seagrass resilience under cumulative dredging affecting light: Predicting risk using dynamic Bayesian networks , 2018 .

[136]  Wayne G. Landis,et al.  A Bayesian Approach to Integrated Ecological and Human Health Risk Assessment for the South River, Virginia Mercury-Contaminated Site. , 2017, Risk analysis : an official publication of the Society for Risk Analysis.

[137]  David Barber,et al.  Bayesian reasoning and machine learning , 2012 .

[138]  D. Rubin,et al.  Maximum likelihood from incomplete data via the EM - algorithm plus discussions on the paper , 1977 .

[139]  Wayne G Landis,et al.  Using Bayesian networks to predict risk to estuary water quality and patterns of benthic environmental DNA in Queensland , 2018, Integrated environmental assessment and management.

[140]  Annukka Lehikoinen,et al.  Incorporating stakeholders' values into environmental decision support: A Bayesian Belief Network approach. , 2019, The Science of the total environment.

[141]  J. Vanhatalo,et al.  Toward Integrative Management Advice of Water Quality, Oil Spills, and Fishery in the Gulf of Finland: A Bayesian Approach , 2014, AMBIO.

[142]  Jörg Berkenhagen,et al.  Integrated modelling tools to support risk-based decision-making in marine spatial management , 2011 .

[143]  Klaus Glenk,et al.  Operationalizing an ecosystem services-based approach using Bayesian Belief Networks: An application to riparian buffer strips , 2015 .

[144]  Robert L Pressey,et al.  Assessing the Effectiveness of Local Management of Coral Reefs Using Expert Opinion and Spatial Bayesian Modeling , 2015, PloS one.

[145]  Gordon C. O'Brien,et al.  A regional-scale ecological risk framework for environmental flow evaluations , 2017 .

[146]  Sakari Kuikka,et al.  Assessing the roles of environmental factors in coastal fish production in the northern Baltic Sea: A Bayesian network application , 2012, Integrated environmental assessment and management.