Protein dynamics from NMR
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[1] P E Wright,et al. NMR solution structure of the inserted domain of human leukocyte function associated antigen-1. , 2000, Journal of molecular biology.
[2] G. Wagner,et al. Identification by NMR Spectroscopy of Residues at Contact Surfaces in Large, Slowly Exchanging Macromolecular Complexes , 1999 .
[3] D. Case. Calculations of NMR dipolar coupling strengths in model peptides , 1999, Journal of biomolecular NMR.
[4] S. F. Lienin,et al. Anisotropic Intramolecular Backbone Dynamics of Ubiquitin Characterized by NMR Relaxation and MD Computer Simulation , 1998 .
[5] M. Summers,et al. Solution structure and dynamics of the Rous sarcoma virus capsid protein and comparison with capsid proteins of other retroviruses. , 2000, Journal of molecular biology.
[6] N. Tjandra,et al. An Approach to Direct Determination of Protein Dynamics from 15N NMR Relaxation at Multiple Fields, Independent of Variable 15N Chemical Shift Anisotropy and Chemical Exchange Contributions , 1999 .
[7] D. Torchia,et al. Using Amide 1H and 15N Transverse Relaxation To Detect Millisecond Time-Scale Motions in Perdeuterated Proteins: Application to HIV-1 Protease , 1998 .
[8] D. Shortle,et al. Correlation between changes in nuclear magnetic resonance order parameters and conformational entropy: Molecular dynamics simulations of native and denatured staphylococcal nuclease , 2000, Proteins.
[9] J. Prestegard,et al. Backbone dynamics of the N-terminal domain in E. coli DnaJ determined by 15N- and 13CO-relaxation measurements. , 1999, Biochemistry.
[10] C. Kroenke,et al. Longitudinal and Transverse 1H−15N Dipolar/15N Chemical Shift Anisotropy Relaxation Interference: Unambiguous Determination of Rotational Diffusion Tensors and Chemical Exchange Effects in Biological Macromolecules , 1998 .
[11] L. Kay,et al. Measurement of Methyl 2H Quadrupolar Couplings in Oriented Proteins. How Uniform Is the Quadrupolar Coupling Constant , 1999 .
[12] G T Montelione,et al. Solution NMR structure and backbone dynamics of the major cold-shock protein (CspA) from Escherichia coli: evidence for conformational dynamics in the single-stranded RNA-binding site. , 1998, Biochemistry.
[13] D. Torchia,et al. Transverse 13C Relaxation of CHD2 Methyl Isotopmers To Detect Slow Conformational Changes of Protein Side Chains , 1999 .
[14] L. Kay,et al. Contributions to conformational entropy arising from bond vector fluctuations measured from NMR-derived order parameters: application to protein folding. , 1996, Journal of molecular biology.
[15] P. Driscoll,et al. NMR exchange broadening arising from specific low affinity protein self-association: Analysis of nitrogen-15 nuclear relaxation for rat CD2 domain 1 , 1999, Journal of biomolecular NMR.
[16] Arthur G. Palmer,et al. NMR order parameters and free energy: an analytical approach and its application to cooperative calcium(2+) binding by calbindin D9k , 1993 .
[17] Millisecond time scale conformational flexibility in a hyperthermophile protein at ambient temperature. , 2000 .
[18] C. Kroenke,et al. Variability of the 15N Chemical Shift Anisotropy in Escherichia coli Ribonuclease H in Solution , 1999 .
[19] J. Michael Schurr,et al. A test of the model-free formulas. Effects of anisotropic rotational diffusion and dimerization. , 1994, Journal of magnetic resonance. Series B.
[20] M. Blackledge,et al. Precision and Uncertainty in the Characterization of Anisotropic Rotational Diffusion by 15N Relaxation , 1998 .
[21] A. Szabó,et al. Model-free approach to the interpretation of nuclear magnetic resonance relaxation in macromolecules. 2. Analysis of experimental results , 1982 .
[22] G. Lipari. Model-free approach to the interpretation of nuclear magnetic resonance relaxation in macromolecules , 1982 .
[23] Anil Kumar,et al. Quantitative measurement of cross-correlations between 15N and 13CO chemical shift anisotropy relaxation mechanisms by multiple quantum NMR , 1999 .
[24] K. Mayo,et al. Using the Model Free Approach to Analyze NMR Relaxation Data in Cases of Anisotropic Molecular Diffusion , 1999 .
[25] J. Louis,et al. Flap opening and dimer-interface flexibility in the free and inhibitor-bound HIV protease, and their implications for function. , 1999, Structure.
[26] A. McGuire,et al. Internal and overall motions of the translation factor eIF4E: Cap binding and insertion in a CHAPS detergent micelle , 1998, Journal of biomolecular NMR.
[27] H. Dyson,et al. Inherent flexibility in a potent inhibitor of blood coagulation, recombinant nematode anticoagulant protein c2. , 1999, European journal of biochemistry.
[28] A. Bax,et al. Anisotropic rotational diffusion of perdeuterated HIV protease from 15N NMR relaxation measurements at two magnetic fields , 1996, Journal of biomolecular NMR.
[29] J. Prestegard,et al. Measurement of cross correlation between dipolar coupling and chemical shift anisotropy in the spin relaxation of 13C, 15N-labeled proteins. , 1998, Journal of magnetic resonance.
[30] Julie D. Forman-Kay,et al. The 'dynamics' in the thermodynamics of binding , 1999, Nature Structural Biology.
[31] and David M. LeMaster,et al. Dynamical Mapping of E. coli Thioredoxin via 13C NMR Relaxation Analysis , 1996 .
[32] A. Palmer,et al. Temperature dependence of intramolecular dynamics of the basic leucine zipper of GCN4: implications for the entropy of association with DNA. , 1999, Journal of molecular biology.
[33] R. Kaptein,et al. Microsecond time scale dynamics in the RXR DNA-binding domain from a combination of spin-echo and off-resonance rotating frame relaxation measurements , 1999, Journal of biomolecular NMR.
[34] Andrew L. Lee,et al. Redistribution and loss of side chain entropy upon formation of a calmodulin–peptide complex , 2000, Nature Structural Biology.
[35] D. Torchia,et al. Determination of 15N chemical shift tensor via 15N-2H dipolar coupling in Boc-glycylglycyl[15N]glycine benzyl ester , 1988 .
[36] D. Torchia,et al. Estimating the time scale of chemical exchange of proteins from measurements of transverse relaxation rates in solution , 1999, Journal of biomolecular NMR.
[37] Milos V. Novotny,et al. Increased protein backbone conformational entropy upon hydrophobic ligand binding , 1999, Nature Structural Biology.
[38] A J Wand,et al. Insights into the local residual entropy of proteins provided by NMR relaxation , 1996, Protein science : a publication of the Protein Society.
[39] M. Akke,et al. May the driving force be with you — whatever it is , 2000, Nature Structural Biology.
[40] Lewis E. Kay,et al. Protein dynamics from NMR , 1998, Nature Structural Biology.
[41] Andrew L. Lee,et al. Assessing potential bias in the determination of rotational correlation times of proteins by NMR relaxation , 1999, Journal of biomolecular NMR.
[42] James E. Roberts,et al. Measurement of heteronuclear bond distances in polycrystalline solids by solid-state NMR techniques , 1987 .
[43] H. Rüterjans,et al. Dynamics of β-CH and β-CH2 Groups of Amino Acid Side Chains in Proteins , 1998, Journal of biomolecular NMR.
[44] D. LeMaster. NMR Relaxation Order Parameter Analysis of the Dynamics of Protein Side Chains , 1999 .
[45] A. Palmer,et al. A Relaxation-Compensated Carr−Purcell−Meiboom−Gill Sequence for Characterizing Chemical Exchange by NMR Spectroscopy , 1999 .
[46] I. Bertini,et al. Solution structure of the B form of oxidized rat microsomal cytochrome b5 and backbone dynamics via 15N rotating-frame NMR-relaxation measurements. Biological implications. , 1999, European journal of biochemistry.
[47] T. Oas,et al. Determinants of backbone dynamics in native BPTI: cooperative influence of the 14-38 disulfide and the Tyr35 side-chain. , 1998, Journal of molecular biology.
[48] H. Berglund,et al. Conformational dynamics and molecular recognition: backbone dynamics of the estrogen receptor DNA-binding domain. , 1999, Journal of molecular biology.
[49] Ad Bax,et al. Protein Backbone Dynamics and 15N Chemical Shift Anisotropy from Quantitative Measurement of Relaxation Interference Effects , 1996 .
[50] P. Pelupessy,et al. Relaxation of Two-Spin Coherence Due to Cross-Correlated Fluctuations of Dipole−Dipole Couplings and Anisotropic Shifts in NMR of 15N,13C-Labeled Biomolecules , 1999 .
[51] M. Akke,et al. Backbone dynamics and energetics of a calmodulin domain mutant exchanging between closed and open conformations. , 1999, Journal of molecular biology.
[52] B. Sykes,et al. Backbone dynamics of the human cc chemokine eotaxin: Fast motions, slow motions, and implications for receptor binding , 1999, Protein science : a publication of the Protein Society.
[53] Daiwen Yang,et al. 1H-13C DIPOLE-DIPOLE CROSS-CORRELATED SPIN RELAXATION AS A PROBE OF DYNAMICS IN UNFOLDED PROTEINS : APPLICATION TO THE DRKN SH3 DOMAIN , 1999 .
[54] E. Zuiderweg,et al. Characterizing semilocal motions in proteins by NMR relaxation studies. , 1998, Proceedings of the National Academy of Sciences of the United States of America.
[55] A. Palmer,et al. A TROSY CPMG sequence for characterizing chemical exchange in large proteins , 1999, Journal of biomolecular NMR.
[56] G T Montelione,et al. Estimation of dynamic parameters from NMR relaxation data using the Lipari-Szabo model-free approach and Bayesian statistical methods. , 1999, Journal of magnetic resonance.
[57] Jörg Peters,et al. Orientational Disorder and Entropy of Water in Protein Cavities , 1997 .
[58] F. Young. Biochemistry , 1955, The Indian Medical Gazette.
[59] A. Szabó,et al. Model-free approach to the interpretation of nuclear magnetic resonance relaxation in macromolecules. 1. Theory and range of validity , 1982 .
[60] N. Tjandra,et al. Direct Measurement of 15N Chemical Shift Anisotropy in Solution , 1998 .
[61] B. Kräutler,et al. Structure and intramodular dynamics of the amino-terminal LIM domain from quail cysteine- and glycine-rich protein CRP2. , 1998, Biochemistry.
[62] M. Akke,et al. Structural dynamics in the C-terminal domain of calmodulin at low calcium levels. , 1999, Journal of molecular biology.
[63] Christopher D. Kroenke,et al. The Static Magnetic Field Dependence of Chemical Exchange Linebroadening Defines the NMR Chemical Shift Time Scale , 2000 .
[64] E. Oldfield,et al. Determination of order parameters and correlation times in proteins: A comparison between Bayesian, Monte Carlo and simple graphical methods , 1999, Journal of biomolecular NMR.
[65] C. Redfield,et al. Characterization of 15N Chemical Shift Anisotropy from Orientation-Dependent Changes to 15N Chemical Shifts in Dilute Bicelle Solutions , 1999 .