Quantitative Proteomics of Synaptosomal Fractions in a Rat Overexpressing Human DISC1 Gene Indicates Profound Synaptic Dysregulation in the Dorsal Striatum

Disrupted-in-schizophrenia 1 (DISC1) is a key protein involved in behavioral processes and various mental disorders, including schizophrenia and major depression. A transgenic rat overexpressing non-mutant human DISC1, modeling aberrant proteostasis of the DISC1 protein, displays behavioral, biochemical and anatomical deficits consistent with aspects of mental disorders, including changes in the dorsal striatum, an anatomical region critical in the development of behavioral disorders. Herein, dorsal striatum of 10 transgenic DISC1 (tgDISC1) and 10 wild type (WT) littermate control rats was used for synaptosomal preparations and for performing liquid chromatography-tandem mass spectrometry (LC-MS)-based quantitative proteomics, using isobaric labeling (TMT10plex). Functional enrichment analysis was generated from proteins with level changes. The increase in DISC1 expression leads to changes in proteins and synaptic-associated processes including membrane trafficking, ion transport, synaptic organization and neurodevelopment. Canonical pathway analysis assigned proteins with level changes to actin cytoskeleton, Gαq, Rho family GTPase and Rho GDI, axonal guidance, ephrin receptor and dopamine-DARPP32 feedback in cAMP signaling. DISC1-regulated proteins proposed in the current study are also highly associated with neurodevelopmental and mental disorders. Bioinformatics analyses from the current study predicted that the following biological processes may be activated by overexpression of DISC1, i.e., regulation of cell quantities, neuronal and axonal extension and long term potentiation. Our findings demonstrate that the effects of overexpression of non-mutant DISC1 or its misassembly has profound consequences on protein networks essential for behavioral control. These results are also relevant for the interpretation of previous as well as for the design of future studies on DISC1.

[1]  K. Bennett,et al.  Mass spectrometric analysis of synaptosomal membrane preparations for the determination of brain receptors, transporters and channels , 2016, Proteomics.

[2]  O. Howes,et al.  The impact of Disrupted-in-Schizophrenia 1 (DISC1) on the dopaminergic system: a systematic review , 2017, Translational Psychiatry.

[3]  Marco Y. Hein,et al.  The Perseus computational platform for comprehensive analysis of (prote)omics data , 2016, Nature Methods.

[4]  C. Welinder,et al.  Coomassie staining as loading control in Western blot analysis. , 2011, Journal of proteome research.

[5]  Akira Sawa,et al.  Linking neurodevelopmental and synaptic theories of mental illness through DISC1 , 2011, Nature Reviews Neuroscience.

[6]  W. Crum,et al.  Simultaneous effects on parvalbumin-positive interneuron and dopaminergic system development in a transgenic rat model for sporadic schizophrenia , 2016, Scientific Reports.

[7]  L. DeLisi,et al.  A frameshift mutation in Disrupted in Schizophrenia 1 in an American family with schizophrenia and schizoaffective disorder , 2005, Molecular Psychiatry.

[8]  P. Mas,et al.  A structural organization for the Disrupted in Schizophrenia 1 protein, identified by high-throughput screening, reveals distinctly folded regions, which are bisected by mental illness-related mutations , 2017, The Journal of Biological Chemistry.

[9]  D. Porteous,et al.  DISC1 and Huntington's Disease – Overlapping Pathways of Vulnerability to Neurological Disorder? , 2011, PloS one.

[10]  G. Lubec,et al.  Validation of dopamine receptor DRD1 and DRD2 antibodies using receptor deficient mice , 2017, Amino Acids.

[11]  S. Levy,et al.  Exome sequencing supports a de novo mutational paradigm for schizophrenia , 2011, Nature Genetics.

[12]  Yingming Zhao,et al.  The Presynaptic Particle Web Ultrastructure, Composition, Dissolution, and Reconstitution , 2001, Neuron.

[13]  Frank B Gertler,et al.  The growth cone cytoskeleton in axon outgrowth and guidance. , 2011, Cold Spring Harbor perspectives in biology.

[14]  H. Steiner,et al.  Misassembly of full-length Disrupted-in-Schizophrenia 1 protein is linked to altered dopamine homeostasis and behavioral deficits , 2016, Molecular Psychiatry.

[15]  D. Rujescu,et al.  Exome Sequencing in 53 Sporadic Cases of Schizophrenia Identifies 18 Putative Candidate Genes , 2014, PloS one.

[16]  Dana Pascovici,et al.  Multiple testing corrections in quantitative proteomics: A useful but blunt tool , 2016, Proteomics.

[17]  H. Kretzschmar,et al.  Convergence of Two Independent Mental Disease Genes on the Protein Level: Recruitment of Dysbindin to Cell-Invasive Disrupted-In-Schizophrenia 1 Aggresomes , 2011, Biological Psychiatry.

[18]  G. Silberberg,et al.  The involvement of ErbB4 with schizophrenia: Association and expression studies , 2006, American journal of medical genetics. Part B, Neuropsychiatric genetics : the official publication of the International Society of Psychiatric Genetics.

[19]  Andrew R. Jones,et al.  ProteomeXchange provides globally co-ordinated proteomics data submission and dissemination , 2014, Nature Biotechnology.

[20]  D. Porteous,et al.  DISC1-binding proteins in neural development, signalling and schizophrenia , 2012, Neuropharmacology.

[21]  Angel Pizarro,et al.  The Post-Synaptic Density of Human Postmortem Brain Tissues: An Experimental Study Paradigm for Neuropsychiatric Illnesses , 2009, PloS one.

[22]  J. Pavía,et al.  [Striatal dopamine transporter density decrease in first episode schizophrenic patients treated with risperidone]. , 2006, Revista espanola de medicina nuclear.

[23]  K Mizuguchi,et al.  Disrupted in Schizophrenia 1 Interactome: evidence for the close connectivity of risk genes and a potential synaptic basis for schizophrenia , 2007, Molecular Psychiatry.

[24]  Leena Peltonen,et al.  Haplotype transmission analysis provides evidence of association for DISC1 to schizophrenia and suggests sex-dependent effects. , 2003, Human molecular genetics.

[25]  N. Brandon,et al.  Disrupted in Schizophrenia 1 forms pathological aggresomes that disrupt its function in intracellular transport. , 2012, Human molecular genetics.

[26]  G. Gallo,et al.  Involvement of Rho-family GTPases in axon branching , 2014, Small GTPases.

[27]  Zhen Yan,et al.  Disrupted-in-Schizophrenia-1 (DISC1) regulates spines of the glutamate synapse via Rac1 , 2010, Nature Neuroscience.

[28]  Prudence Mutowo-Meullenet,et al.  The GOA database: Gene Ontology annotation updates for 2015 , 2014, Nucleic Acids Res..

[29]  Pornpimol Charoentong,et al.  ClueGO: a Cytoscape plug-in to decipher functionally grouped gene ontology and pathway annotation networks , 2009, Bioinform..

[30]  Tetsuya Iidaka,et al.  Common Variants in MAGI2 Gene Are Associated with Increased Risk for Cognitive Impairment in Schizophrenic Patients , 2012, PloS one.

[31]  H. Meltzer,et al.  Genetic predictors of antipsychotic response to lurasidone identified in a genome wide association study and by schizophrenia risk genes , 2017, Schizophrenia Research.

[32]  C. Eyers Universal sample preparation method for proteome analysis , 2009 .

[33]  P. Guest,et al.  Effects of olanzapine on serum protein phosphorylation patterns in patients with schizophrenia , 2015, Proteomics. Clinical applications.

[34]  J. Gebler,et al.  Two-dimensional separation of peptides using RP-RP-HPLC system with different pH in first and second separation dimensions. , 2005, Journal of separation science.

[35]  Sabine Bahn,et al.  Alteration of Neuronal Excitability and Short-Term Synaptic Plasticity in the Prefrontal Cortex of a Mouse Model of Mental Illness , 2017, The Journal of Neuroscience.

[36]  R. Huganir,et al.  GRASP-1 A Neuronal RasGEF Associated with the AMPA Receptor/GRIP Complex , 2000, Neuron.

[37]  D. Soares,et al.  DISC1 genetics, biology and psychiatric illness , 2013, Frontiers in Biology.

[38]  Jennifer E. Chubb,et al.  The DISC locus in psychiatric illness , 2008, Molecular Psychiatry.

[39]  M. Bernardo,et al.  Disminución del transportador de dopamina estriatal en primeros episodios psicóticos de pacientes esquizofrénicos tratados con risperidona , 2006 .

[40]  Martin S. Taylor,et al.  Disruption of two novel genes by a translocation co-segregating with schizophrenia. , 2000, Human molecular genetics.

[41]  C. Mattern,et al.  Intra-nasal dopamine alleviates cognitive deficits in tgDISC1 rats which overexpress the human DISC1 gene , 2017, Neurobiology of Learning and Memory.

[42]  Eric W. Danielson,et al.  S-SCAM, A Rare Copy Number Variation Gene, Induces Schizophrenia-Related Endophenotypes in Transgenic Mouse Model , 2015, The Journal of Neuroscience.

[43]  Michael J. Devine,et al.  DISC1 is a coordinator of intracellular trafficking to shape neuronal development and connectivity , 2016, The Journal of physiology.

[44]  Jacques J. Peschon,et al.  Semaphorin 7A promotes axon outgrowth through integrins and MAPKs , 2003, Nature.

[45]  Jennifer E. Chubb,et al.  DISC1 and PDE4B Are Interacting Genetic Factors in Schizophrenia That Regulate cAMP Signaling , 2005, Science.

[46]  C. Korth,et al.  Insolubility of Disrupted-in-Schizophrenia 1 Disrupts Oligomer-Dependent Interactions with Nuclear Distribution Element 1 and Is Associated with Sporadic Mental Disease , 2008, The Journal of Neuroscience.

[47]  Sheila Christie,et al.  Yeast two-hybrid screens implicate DISC1 in brain development and function. , 2003, Biochemical and biophysical research communications.

[48]  M. Caron,et al.  Impaired NMDA receptor transmission alters striatal synapses and DISC1 protein in an age-dependent manner , 2011, Proceedings of the National Academy of Sciences.

[49]  S. Brignani,et al.  Axon guidance proteins in neurological disorders , 2015, The Lancet Neurology.

[50]  I. Deary,et al.  Rare disruptive variants in the DISC1 Interactome and Regulome: association with cognitive ability and schizophrenia , 2016, Molecular Psychiatry.

[51]  C. Korth,et al.  Revisiting Disrupted-in-Schizophrenia 1 as a scaffold protein , 2013, Biological chemistry.

[52]  J. O'Donnell,et al.  Altered axonal targeting and short-term plasticity in the hippocampus of Disc1 mutant mice , 2011, Proceedings of the National Academy of Sciences.

[53]  Josselin Noirel,et al.  Minimising iTRAQ ratio compression through understanding LC‐MS elution dependence and high‐resolution HILIC fractionation , 2011, Proteomics.

[54]  Thomas C. Wiegers,et al.  The Comparative Toxicogenomics Database's 10th year anniversary: update 2015 , 2014, Nucleic Acids Res..