Amidase domains from bacterial and phage autolysins define a family of gamma-D,L-glutamate-specific amidohydrolases.
暂无分享,去创建一个
Michael Y. Galperin | Daniel J Rigden | Michael Y Galperin | M. J. Jedrzejas | D. Rigden | Mark J Jedrzejas
[1] K. Wolff,et al. P45, an extracellular 45 kDa protein of Listeria monocytogenes with similarity to protein p60 and exhibiting peptidoglycan lytic activity , 2000, Archives of Microbiology.
[2] D T Jones,et al. Protein secondary structure prediction based on position-specific scoring matrices. , 1999, Journal of molecular biology.
[3] A G Murzin,et al. SCOP: a structural classification of proteins database for the investigation of sequences and structures. , 1995, Journal of molecular biology.
[4] Vivek Anantharaman,et al. Evolutionary history, structural features and biochemical diversity of the NlpC/P60 superfamily of enzymes , 2003, Genome Biology.
[5] G. Michel,et al. Caractérisation d'une nouvelle endopeptidase spécifique des liaisons γ-d-glutamyl-l-lysine et γ-d-glutamyl-(l)meso-diaminopimélate de substrats peptidoglycaniques, chez Bacillus sphaericus 9602 au cours de la sporulation , 1979 .
[6] Neil D. Rawlings,et al. MEROPS: the protease database , 2002, Nucleic Acids Res..
[7] C. H. Lin,et al. Dissection of Glutathionylspermidine Synthetase/Amidase from Escherichia coli into Autonomously Folding and Functional Synthetase and Amidase Domains* , 1997, The Journal of Biological Chemistry.
[8] Peer Bork,et al. Recent improvements to the SMART domain-based sequence annotation resource , 2002, Nucleic Acids Res..
[9] Steven E. Brenner,et al. WebLogo: A sequence logo generator - eScholarship , 2004 .
[10] C Sander,et al. An evolutionary treasure: unification of a broad set of amidohydrolases related to urease , 1997, Proteins.
[11] M. Pagni,et al. Bacillus subtilis 168 gene lytF encodes a gamma-D-glutamate-meso-diaminopimelate muropeptidase expressed by the alternative vegetative sigma factor, sigmaD. , 1999, Microbiology.
[12] Robert D. Finn,et al. The Pfam protein families database , 2004, Nucleic Acids Res..
[13] C. Valentin,et al. Action d'endopeptidases de Bacillus sphaericus sur les peptidoglycanes bactériens et sur des fragments peptidoglycaniques* , 1983 .
[14] Janet M Thornton,et al. Sequence and structural differences between enzyme and nonenzyme homologs. , 2002, Structure.
[15] M. Arnaud,et al. Bacillus subtilis 168 genetic transformation mediated by outgrowing spores: necessity for cell contact , 1978, Journal of bacteriology.
[16] Michael Y. Galperin,et al. The COG database: a tool for genome-scale analysis of protein functions and evolution , 2000, Nucleic Acids Res..
[17] A. Fairlamb,et al. Characterization of recombinant glutathionylspermidine synthetase/amidase from Crithidia fasciculata. , 2002, The Biochemical journal.
[18] A. Murzin,et al. A protein catalytic framework with an N-terminal nucleophile is capable of self-activation , 1995, Nature.
[19] Alex Bateman,et al. The CHAP domain: a large family of amidases including GSP amidase and peptidoglycan hydrolases. , 2003, Trends in biochemical sciences.
[20] M. Kula,et al. An alternative mechanism for amidase signature enzymes. , 2002, Journal of molecular biology.
[21] Tsute Chen,et al. Cloning of the Streptococcus mutans Gene Encoding Glucan Binding Protein B and Analysis of Genetic Diversity and Protein Production in Clinical Isolates , 2001, Infection and Immunity.
[22] S. Brunak,et al. SHORT COMMUNICATION Identification of prokaryotic and eukaryotic signal peptides and prediction of their cleavage sites , 1997 .
[23] C. Brenner. Catalysis in the nitrilase superfamily. , 2002, Current opinion in structural biology.
[24] B. Eikmanns,et al. Identification and Molecular Analysis of PcsB, a Protein Required for Cell Wall Separation of Group B Streptococcus , 2001, Journal of bacteriology.
[25] W. Goebel,et al. The iap gene of Listeria monocytogenes is essential for cell viability, and its gene product, p60, has bacteriolytic activity , 1993, Journal of bacteriology.
[26] A. Fairlamb,et al. A Single Enzyme Catalyses Formation of Trypanothione from Glutathione and Spermidine in Trypanosoma cruzi * , 2002, The Journal of Biological Chemistry.
[27] R. Jayaswal,et al. Sequence analysis of a Staphylococcus aureus gene encoding a peptidoglycan hydrolase activity. , 1991, Gene.
[28] H. Misono,et al. Biochemistry and molecular genetics of poly-γ-glutamate synthesis , 2002, Applied Microbiology and Biotechnology.
[29] J. Wehland,et al. IrpA , is highly homologous to monocytogenesPrfA-regulated gene in Listeria Identification and characterization of a novel , 1996 .
[30] Arne Elofsson,et al. Structure prediction meta server , 2001, Bioinform..
[31] M. Loessner,et al. Evidence for a Holin-Like Protein Gene Fully Embedded Out of Frame in the Endolysin Gene of Staphylococcus aureusBacteriophage 187 , 1999, Journal of bacteriology.
[32] C. H. Lin,et al. Evidence for a glutathionyl-enzyme intermediate in the amidase activity of the bifunctional glutathionylspermidine synthetase/amidase from Escherichia coli. , 1997, Biochemistry.
[33] D. Karamata,et al. The lytE Gene of Bacillus subtilis 168 Encodes a Cell Wall Hydrolase , 1998, Journal of bacteriology.
[34] G. S. Chhatwal,et al. Identification and Characterization of a Novel Secreted Immunoglobulin Binding Protein from Group A Streptococcus , 2001, Infection and Immunity.
[35] M. Loessner,et al. The two-component lysis system of Staphylococcus aureus bacteriophage Twort: a large TTG-start holin and an associated amidase endolysin. , 1998, FEMS microbiology letters.
[36] M. Pagni,et al. Bacillus subtilis 168 gene lytF encodes a γ-D-glutamate-meso-diaminopimelate muropeptidase expressed by the alternative vegetative sigma factor, σD , 1999 .