Detection of Spatial Activation Patterns as Unsupervised Segmentation of fMRI Data

In functional connectivity analysis, networks of interest are defined based on correlation with the mean time course of a user-selected 'seed' region. In this work we propose to simultaneously estimate the optimal representative time courses that summarize the fMRI data well and the partition of the volume into a set of disjoint regions that are best explained by these representative time courses. Our approach offers two advantages. First, is removes the sensitivity of the analysis to the details of the seed selection. Second, it substantially simplifies group analysis by eliminating the need for a subject-specific threshold at which correlation values are deemed significant. This unsupervised technique generalizes connectivity analysis to situations where candidate seeds are difficult to identify reliably or are unknown. Our experimental results indicate that the functional segmentation provides a robust, anatomically meaningful and consistent model for functional connectivity in fMRI.

[1]  B. Biswal,et al.  Functional connectivity in the motor cortex of resting human brain using echo‐planar mri , 1995, Magnetic resonance in medicine.

[2]  Terrence J. Sejnowski,et al.  An Information-Maximization Approach to Blind Separation and Blind Deconvolution , 1995, Neural Computation.

[3]  S Makeig,et al.  Analysis of fMRI data by blind separation into independent spatial components , 1998, Human brain mapping.

[4]  Rafael Malach,et al.  Extrinsic and intrinsic systems in the posterior cortex of the human brain revealed during natural sensory stimulation. , 2007, Cerebral cortex.

[5]  Koenraad Van Leemput,et al.  Automated model-based tissue classification of MR images of the brain , 1999, IEEE Transactions on Medical Imaging.

[6]  R Baumgartner,et al.  A hierarchical clustering method for analyzing functional MR images. , 1999, Magnetic resonance imaging.

[7]  S. Ruan,et al.  A multistep Unsupervised Fuzzy Clustering Analysis of fMRI time series , 2000, Human brain mapping.

[8]  R Baumgartner,et al.  Fuzzy clustering of gradient‐echo functional MRI in the human visual cortex. Part II: Quantification , 1997, Journal of magnetic resonance imaging : JMRI.

[9]  Dietmar Cordes,et al.  Hierarchical clustering to measure connectivity in fMRI resting-state data. , 2002, Magnetic resonance imaging.

[10]  Geoffrey J. McLachlan,et al.  Mixture models : inference and applications to clustering , 1989 .

[11]  Olivier D. Faugeras,et al.  Feature Detection in fMRI Data: The Information Bottleneck Approach , 2003, MICCAI.

[12]  D. Rubin,et al.  Maximum likelihood from incomplete data via the EM - algorithm plus discussions on the paper , 1977 .

[13]  Peter J. Cameron,et al.  Rank three permutation groups with rank three subconstituents , 1985, J. Comb. Theory, Ser. B.

[14]  Karl J. Friston,et al.  Functional Connectivity: The Principal-Component Analysis of Large (PET) Data Sets , 1993, Journal of cerebral blood flow and metabolism : official journal of the International Society of Cerebral Blood Flow and Metabolism.

[15]  Karl J. Friston Functional and effective connectivity in neuroimaging: A synthesis , 1994 .

[16]  Olivier D. Faugeras,et al.  Feature characterization in fMRI data: the Information Bottleneck approach , 2004, Medical Image Anal..

[17]  S. Edelman,et al.  Human Brain Mapping 6:316–328(1998) � A Sequence of Object-Processing Stages Revealed by fMRI in the Human Occipital Lobe , 2022 .

[18]  L. K. Hansen,et al.  On Clustering fMRI Time Series , 1999, NeuroImage.

[19]  R. Edelman,et al.  Magnetic resonance imaging (2) , 1993, The New England journal of medicine.

[20]  C. F. Beckmann,et al.  Tensorial extensions of independent component analysis for multisubject FMRI analysis , 2005, NeuroImage.

[21]  R Baumgartner,et al.  Fuzzy clustering of gradient‐echo functional MRI in the human visual cortex. Part I: Reproducibility , 1997, Journal of magnetic resonance imaging : JMRI.

[22]  Silke Dodel,et al.  Detection of signal synchronizations in resting-state fMRI datasets , 2006, NeuroImage.