Size-exclusion chromatography with multi-angle light scattering for elucidating protein aggregation mechanisms.

In this chapter, application of size exclusion chromatography with inline multi-angle light scattering (SEC-MALS) to protein systems is reviewed, in particular for its use in elucidating mechanistic details of net-irreversible aggregation processes. After motivating why SEC-MALS or analogous techniques are natural choices to interrogate such aggregating systems, the individual techniques (SEC and MALS) are reviewed briefly, as needed for the context of the remainder of the chapter. Illustrative examples are provided to highlight when and how SEC-MALS can be applied to test mass-action kinetic models for protein aggregation. Limitations of the technique, as well as recommendations for troubleshooting and potential errors in data interpretation are also provided.

[1]  G. McRae,et al.  A three-stage kinetic model of amyloid fibrillation. , 2007, Biophysical journal.

[2]  L. Stryer,et al.  Cooperative polymerization reactions. Analytical approximations, numerical examples, and experimental strategy. , 1986, Biophysical journal.

[3]  E. Powers,et al.  The kinetics of nucleated polymerizations at high concentrations: amyloid fibril formation near and above the "supercritical concentration". , 2006, Biophysical journal.

[4]  William F Weiss,et al.  Principles, approaches, and challenges for predicting protein aggregation rates and shelf life. , 2009, Journal of pharmaceutical sciences.

[5]  Christopher J Roberts,et al.  Comparative effects of pH and ionic strength on protein-protein interactions, unfolding, and aggregation for IgG1 antibodies. , 2010, Journal of pharmaceutical sciences.

[6]  W. Stockmayer Light Scattering in Multi‐Component Systems , 1950 .

[7]  William F. Weiss,et al.  Characterization of high-molecular-weight nonnative aggregates and aggregation kinetics by size exclusion chromatography with inline multi-angle laser light scattering. , 2009, Journal of pharmaceutical sciences.

[8]  S. Shire,et al.  A critical review of analytical ultracentrifugation and field flow fractionation methods for measuring protein aggregation , 2006, The AAPS Journal.

[9]  Yi Li,et al.  Reexamining protein-protein and protein-solvent interactions from Kirkwood-Buff analysis of light scattering in multi-component solutions. , 2011, The Journal of chemical physics.

[10]  Christopher J Roberts,et al.  A Lumry-Eyring nucleated polymerization model of protein aggregation kinetics: 1. Aggregation with pre-equilibrated unfolding. , 2007, The journal of physical chemistry. B.

[11]  C. Roberts,et al.  Lumry-Eyring nucleated-polymerization model of protein aggregation kinetics. 2. Competing growth via condensation and chain polymerization. , 2009, The journal of physical chemistry. B.

[12]  J. Philo Is any measurement method optimal for all aggregate sizes and types? , 2006, The AAPS Journal.

[13]  A. Middelberg,et al.  Quantitative analysis of virus‐like particle size and distribution by field‐flow fractionation , 2008, Biotechnology and bioengineering.

[14]  C. Roberts Kinetics of Irreversible Protein Aggregation: Analysis of Extended Lumry−Eyring Models and Implications for Predicting Protein Shelf Life , 2003 .

[15]  R. Murphy,et al.  A mathematical model of the kinetics of beta-amyloid fibril growth from the denatured state. , 2001, Biophysical journal.

[16]  Bruno H. Zimm,et al.  Apparatus and Methods for Measurement and Interpretation of the Angular Variation of Light Scattering; Preliminary Results on Polystyrene Solutions , 1948 .

[17]  William F. Weiss,et al.  Nonnative protein polymers: structure, morphology, and relation to nucleation and growth. , 2007, Biophysical journal.

[18]  R. Finke,et al.  Protein aggregation kinetics, mechanism, and curve-fitting: a review of the literature. , 2009, Biochimica et biophysica acta.

[19]  George B. Benedek,et al.  Kinetic theory of fibrillogenesis of amyloid β-protein , 1997 .

[20]  Peter Lindner,et al.  Neutrons, X-rays and light : scattering methods applied to soft condensed matter , 2002 .

[21]  A. Donald,et al.  Common motifs in protein self-assembly. , 2008, Faraday discussions.

[22]  Christopher J Roberts,et al.  Non‐native protein aggregation kinetics , 2007, Biotechnology and bioengineering.

[23]  William F. Weiss,et al.  Nucleation, growth, and activation energies for seeded and unseeded aggregation of alpha-chymotrypsinogen A. , 2008, Biochemistry.

[24]  William F. Weiss,et al.  Computational design and biophysical characterization of aggregation-resistant point mutations for γD crystallin illustrate a balance of conformational stability and intrinsic aggregation propensity. , 2011, Biochemistry.

[25]  Jianping Zhou,et al.  Enhanced oral absorption of paclitaxel in N-deoxycholic acid-N, O-hydroxyethyl chitosan micellar system. , 2010, Journal of pharmaceutical sciences.

[26]  Babatunde A. Ogunnaike,et al.  Multi-variate approach to global protein aggregation behavior and kinetics: effects of pH, NaCl, and temperature for alpha-chymotrypsinogen A. , 2010, Journal of pharmaceutical sciences.

[27]  C. Roberts,et al.  Nonnative aggregation of an IgG1 antibody in acidic conditions, part 2: nucleation and growth kinetics with competing growth mechanisms. , 2011, Journal of pharmaceutical sciences.