Glycosylation sites identified by detection of glycosylated amino acids released from Edman degradation: the identification of Xaa-Pro-Xaa-Xaa as a motif for Thr-O-glycosylation.

Here we report the use of automated Edman degradation of covalently linked glycopeptides to identify positively the sites of O- and N-glycosylation. The O-glycosidic linkage of carbohydrate to the hydroxy amino acids Ser and Thr is a major form of post-translational modification. However, unlike Asn-linked glycosylation, which is identified by the consensus sequence Asn-Xaa-Thr/Ser, no simple motif conferring O-linkage to Thr and Ser has been described. After sequencing glycopeptides derived from two cell surface glycoproteins, a Thr-O-glycosylation motif of Xaa-Pro-Xaa-Xaa, where at least one Xaa = Thr(Sac), has been defined. This motif predicts the site(s) of Pro- associated Thr-O-glycosylation in O-glycosylated proteins, although it is clear that there are also other forms of Thr-O-glycosylation not associated with Pro.

[1]  R. Hill,et al.  Ovine submaxillary mucin. Primary structure and peptide substrates of UDP-N-acetylgalactosamine:mucin transferase. , 1977, The Journal of biological chemistry.

[2]  T. Cruz,et al.  Identification of the major sites of enzymic glycosylation of myelin basic protein. , 1983, Biochimica et biophysica acta.

[3]  M. Taylor,et al.  Primary structure of the mannose receptor contains multiple motifs resembling carbohydrate-recognition domains. , 1990, The Journal of biological chemistry.

[4]  S. Kornfeld,et al.  Structure of the carbohydrate units of IgA1 immunoglobulin. II. Structure of the O-glycosidically linked oligosaccharide units. , 1974, The Journal of biological chemistry.

[5]  S. P. Andrews,et al.  Investigation of the requirements for O-glycosylation by bovine submaxillary gland UDP-N-acetylgalactosamine:polypeptide N-acetylgalactosamine transferase using synthetic peptide substrates. , 1981, The Journal of biological chemistry.

[6]  P. Y. Chou,et al.  Conformational parameters for amino acids in helical, beta-sheet, and random coil regions calculated from proteins. , 1974, Biochemistry.

[7]  R. Huber,et al.  Human C1 inhibitor: primary structure, cDNA cloning, and chromosomal localization. , 1986, Biochemistry.

[8]  A. F. Bradbury,et al.  Substrate recognition by UDP-N-acetyl-α-d-galactosamine: polypeptide N-acetyl-α-d-galactosaminyltransferase. Effects of chain length and disulphide bonding of synthetic peptide substrates , 1988 .

[9]  J. Young,et al.  Enzymic O-glycosylation of synthetic peptides from sequences in basic myelin protein. , 1979, Biochemistry.

[10]  A. Kobata,et al.  Hydrazinolysis of asparagine-linked sugar chains to produce free oligosaccharides. , 1982, Methods in enzymology.

[11]  T. Marti,et al.  The complete amino acid sequence of the A-chain of human plasma alpha 2HS-glycoprotein. , 1986, The Journal of biological chemistry.

[12]  M. Fukuda Characterization of O-linked saccharides from cell surface glycoproteins. , 1989, Methods in enzymology.

[13]  S. Lohmander,et al.  Structural relationship between α1-microglobulin from man, guinea-pig, rat and rabbit , 1987 .

[14]  K Fujikawa,et al.  Amino acid sequence of the heavy chain of human alpha-factor XIIa (activated Hageman factor). , 1985, The Journal of biological chemistry.

[15]  H. Brewer,et al.  The Complete Amino Acid Sequence of Alanine Apolipoprotein (apoC-III), an Apolipoprotein from Human Plasma Very Low Density Lipoproteins , 1974 .

[16]  A. Varki,et al.  Radioactive tracer techniques in the sequencing of glycoprotein oligosaccharides , 1991, FASEB journal : official publication of the Federation of American Societies for Experimental Biology.

[17]  T. Cruz,et al.  The identification of threonine-95 as the major site of glycosylation in normal human myelin basic protein. , 1984, Biochemical Journal.

[18]  A. Barclay,et al.  The sequence of rat leukosialin (W3/13 antigen) reveals a molecule with O‐linked glycosylation of one third of its extracellular amino acids. , 1987, The EMBO journal.

[19]  G. Biserte,et al.  Carbohydrate-peptide linkage in glycoproteins. , 1976, Archives of biochemistry and biophysics.

[20]  A. Barclay,et al.  Purification, chain separation and sequence of the MRC OX‐8 antigen, a marker of rat cytotoxic T lymphocytes. , 1985, The EMBO journal.

[21]  J. Williams,et al.  Structural characterization of Dictyostelium discoideum prespore-specific gene D19 and of its product, cell surface glycoprotein PsA , 1988, Molecular and cellular biology.

[22]  A. Kobata,et al.  Different asparagine-linked sugar chains on the two polypeptide chains of human chorionic gonadotropin. , 1980, Biochemical and biophysical research communications.