A likelihood approach for comparing synonymous and nonsynonymous nucleotide substitution rates, with application to the chloroplast genome.
暂无分享,去创建一个
[1] Samuel Karlin,et al. A First Course on Stochastic Processes , 1968 .
[2] T. Jukes. CHAPTER 24 – Evolution of Protein Molecules , 1969 .
[3] R. Grantham. Amino Acid Difference Formula to Help Explain Protein Evolution , 1974, Science.
[4] J. A. Cavender. Taxonomy with confidence , 1978 .
[5] C. Loan,et al. Nineteen Dubious Ways to Compute the Exponential of a Matrix , 1978 .
[6] M. O. Dayhoff. A model of evolutionary change in protein , 1978 .
[7] J. Felsenstein. Cases in which Parsimony or Compatibility Methods will be Positively Misleading , 1978 .
[8] Walter Gilbert,et al. The evolution of genes: the chicken preproinsulin gene , 1980, Cell.
[9] C. Luo,et al. A new method for estimating synonymous and nonsynonymous rates of nucleotide substitution considering the relative likelihood of nucleotide and codon changes. , 1985, Molecular biology and evolution.
[10] H. Clifford,et al. The Families of the Monocotyledons: Structure, Evolution, and Taxonomy , 1985 .
[11] W. Li,et al. Evidence for higher rates of nucleotide substitution in rodents than in man. , 1985, Proceedings of the National Academy of Sciences of the United States of America.
[12] Wen-Hsiung Li,et al. Evolution of DNA Sequences , 1985 .
[13] T. Kohchi,et al. Chloroplast gene organization deduced from complete sequence of liverwort Marchantia polymorpha chloroplast DNA , 1986, Nature.
[14] M. Nei,et al. Simple methods for estimating the numbers of synonymous and nonsynonymous nucleotide substitutions. , 1986, Molecular biology and evolution.
[15] F. Takaiwa,et al. The complete nucleotide sequence of the tobacco chloroplast genome: its gene organization and expression , 1986, The EMBO journal.
[16] Wen-Hsiung Li,et al. Rates of nucleotide substitution vary greatly among plant mitochondrial, chloroplast, and nuclear DNAs. , 1987, Proceedings of the National Academy of Sciences of the United States of America.
[17] P. Sharp,et al. Identification of functional open reading frames in chloroplast genomes. , 1988, Gene.
[18] M. Gouy,et al. Date of the monocot-dicot divergence estimated from chloroplast DNA sequence data. , 1989, Proceedings of the National Academy of Sciences of the United States of America.
[19] Michael D. Hendy,et al. A Framework for the Quantitative Study of Evolutionary Trees , 1989 .
[20] William H. Press,et al. Numerical recipes , 1990 .
[21] B S Weir,et al. Testing for equality of evolutionary rates. , 1992, Genetics.
[22] M. Hasegawa,et al. Amino acid substitution of proteins coded for in mitochondrial DNA during mammalian evolution. , 1992, Idengaku zasshi.
[23] S. Strauss,et al. Extensive variation in evolutionary rate of rbcL gene sequences among seed plants. , 1992, Proceedings of the National Academy of Sciences of the United States of America.
[24] S. Muse,et al. Relative rates of nucleotide substitution in the chloroplast genome. , 1993, Molecular phylogenetics and evolution.