The structure of human metaphase chromosomes: its histological perspective and new horizons by atomic force microscopy.

Studies on the structure of the human chromosome were reviewed from the histological perspective and discussed in connection with our recent findings obtained mainly by atomic force microscopy (AFM). In this paper, we introduce several hitherto known models of the high-order structure of the metaphase chromosome and discuss the actual structure of chromosomes in relation to such structures as spiral chromatids, chromosome bands, and chromosome scaffolds. In chromosomes treated with Ohnuki's hypotonic solution, the chromosome arms were elongated and showed a characteristic spiral pattern of chromatid fibers. On the other hand, alternating transverse ridges and grooves were clearly observed on the surface of chromosomes treated with 0.025% trypsin for G-banding, and these ridges and grooves corresponded to the dark and pale bands of G-banded chromosomes. Similar findings were also found in chromosomes treated with quinacrine mastards for Q-banding. Fibers bridging the gap between the sister chromatids were often observed in G/Q-banded chromosomes; these fibers tended to be restricted within the G/Q-positive portions, suggesting the presence of chromatin fibers bridging these regions. Based on these findings in conjunction with previous studies, we outlined the high-order structure of the human chromosome. Recent advances in nanotechnology have provided new AFM techniques for the imaging and handling of materials at nano-scale resolution. Application of these techniques to chromosome research is expected to provide valuable information on the chromosome structure in relation to its function.

[1]  F. Sahin,et al.  The mechanism of G-banding detected by atomic force microscopy. , 2006, Scanning.

[2]  T. Ushiki,et al.  Scanning near field optical/atomic force microscopy of bromodeoxyuridine-incorporated human chromosomes. , 2002, Archives of histology and cytology.

[3]  T. Ushiki,et al.  Imaging of chromosomes at nano-meter scale resolution using scanning near-field optical/atomic force microscopy. , 2002, Archives of histology and cytology.

[4]  T. Ushiki,et al.  Simultaneous collection of topographic and fluorescent images of barley chromosomes by scanning near-field optical/atomic force microscopy. , 2002, Journal of electron microscopy.

[5]  T. Ushiki,et al.  Three-dimensional structure of G-banded human metaphase chromosomes observed by atomic force microscopy. , 2001, Archives of histology and cytology.

[6]  Mervyn J Miles,et al.  Enhanced imaging of DNA via active quality factor control , 2001 .

[7]  R. Stark,et al.  GTG banding pattern on human metaphase chromosomes revealed by high resolution atomic‐force microscopy , 2001, Journal of microscopy.

[8]  M. Miles,et al.  Selective cleaning of the cell debris in human chromosome preparations studied by scanning force microscopy. , 1999, Journal of structural biology.

[9]  A. T. Sumner THE STRUCTURE OF THE CENTROMERIC REGION OF CHO CHROMOSOMES , 1998, Cell biology international.

[10]  K. Fukui,et al.  Globular and Fibrous Structure in Barley Chromosomes Revealed by High-Resolution Scanning Electron Microscopy , 1997, Chromosome Research.

[11]  Y. Kinjo,et al.  Simultaneous detection of near-field topographic and fluorescence images of human chromosomes via scanning near-field optical/atomic-force microscopy (SNOAM). , 1997, Nucleic acids research.

[12]  C. Ascoli,et al.  Atomic force microscope imaging of chromosome structure during G-banding treatments. , 1997, Genome.

[13]  T. Ushiki,et al.  Atomic force microscopy in histology and cytology. , 1996, Archives of histology and cytology.

[14]  Wendy A Bickmore,et al.  Visualizing the Spatial Relationships between Defined DNA Sequences and the Axial Region of Extracted Metaphase Chromosomes , 1996, Cell.

[15]  P. Cook A chromomeric model for nuclear and chromosome structure. , 1995, Journal of cell science.

[16]  G. Mazzotti,et al.  High-resolution FEISEM detection of DNA centromeric probes in HeLa metaphase chromosomes. , 1995, The journal of histochemistry and cytochemistry : official journal of the Histochemistry Society.

[17]  C. Ascoli,et al.  Longitudinal patterns similar to G-banding in untreated human chromosomes: evidence from atomic force microscopy , 1994, Chromosoma.

[18]  U. K. Laemmli,et al.  Metaphase chromosome structure: Bands arise from a differential folding path of the highly AT-rich scaffold , 1994, Cell.

[19]  C. Putman,et al.  High‐resolution imaging of chromosome‐related structures by atomic force microscopy , 1992, Journal of microscopy.

[20]  J. Greve,et al.  Atomic force microscope featuring an integrated optical microscope , 1992 .

[21]  J. B. Rattner,et al.  Integrating chromosome structure with function , 1992, Chromosoma.

[22]  A. T. Sumner Scanning electron microscopy of mammalian chromosomes from prophase to telophase , 1991, Chromosoma.

[23]  R. Herrmann,et al.  High resolution scanning electron microscopy of plant chromosomes , 1991, Chromosoma.

[24]  U. K. Laemmli,et al.  The metaphase scaffold is helically folded: Sister chromatids have predominantly opposite helical handedness , 1988, Cell.

[25]  U. K. Laemmli,et al.  Scaffold attachment of DNA loops in metaphase chromosomes. , 1988, Journal of molecular biology.

[26]  J. B. Rattner,et al.  Radial loops and helical coils coexist in metaphase chromosomes , 1985, Cell.

[27]  W. Earnshaw,et al.  Localization of topoisomerase II in mitotic chromosomes , 1985, The Journal of cell biology.

[28]  G. Holmquist,et al.  Characterization of Giemsa dark- and light-band DNA , 1982, Cell.

[29]  C. Harrison,et al.  High-resolution scanning electron microscopy of human metaphase chromosomes. , 1982, Journal of cell science.

[30]  C. D. Lewis,et al.  Higher order metaphase chromosome structure: Evidence for metalloprotein interactions , 1982, Cell.

[31]  C. Harrison,et al.  Scanning electron microscopy of the G-banded human karyotype. , 1981, Experimental cell research.

[32]  U. K. Laemmli,et al.  Metaphase chromosome structure: Evidence for a radial loop model , 1979, Cell.

[33]  G. D. Burkholder,et al.  DNA-protein interactions and chromosome banding. , 1977, Experimental cell research.

[34]  J. R. Paulson,et al.  The structure of histone-depleted metaphase chromosomes , 1977, Cell.

[35]  F. Crick,et al.  Higher-order structure of human mitotic chromosomes. , 1977, Proceedings of the National Academy of Sciences of the United States of America.

[36]  H. G. Schwarzacher Chromosomes: in Mitosis and Interphase , 1976 .

[37]  D. W. Bath Surface ultrastructure of trypsin-banded chromosomes. , 1976, Experimental cell research.

[38]  D. Comings,et al.  Mechanisms of chromosome banding , 1975, Chromosoma.

[39]  M. Seabright A rapid banding technique for human chromosomes. , 1971, Lancet.

[40]  A. T. Sumner,et al.  New technique for distinguishing between human chromosomes. , 1971, Nature: New biology.

[41]  T. Caspersson,et al.  Differential binding of alkylating fluorochromes in human chromosomes. , 1970, Experimental cell research.

[42]  Y. Ohnuki Demonstration of the Spiral Structure of Human Chromosomes , 1965, Nature.

[43]  E. J. Dupraw Macromolecular Organization of Nuclei and Chromosomes: A Folded Fibre Model Based on Whole-Mount Electron Microscopy , 1965, Nature.

[44]  H. Huxley,et al.  The electron microscopy of unsectioned human chromosomes , 1962, Annals of human genetics.

[45]  T. Taniguchi,et al.  High-order structure of metaphase chromosomes: evidence for a multiple coiling model , 2004, Chromosoma.

[46]  J. B. Rattner,et al.  The organization of the mammalian kinetochore: a scanning electron microscope study , 2004, Chromosoma.

[47]  H. Kato,et al.  Factors involved in the production of banded structures in mammalian chromosomes , 2004, Chromosoma.

[48]  H. G. Schwarzacher,et al.  Elektronenmikroskopische Untersuchungen menschlicher Metaphasen-Chromosomen , 2004, Humangenetik.

[49]  Z. Shao,et al.  Atomic force microscopy in structural biology: from the subcellular to the submolecular. , 2000, Journal of electron microscopy.

[50]  K. V. van Holde,et al.  Chromatin structure revisited. , 1999, Critical reviews in eukaryotic gene expression.

[51]  A. T. Sumner The mitotic chromosome , 1998 .

[52]  P. Muehlig,et al.  The nature of G-bands analyzed by chromosome stretching. , 1997, Cytogenetics and cell genetics.

[53]  W. Bickmore,et al.  Chromosome Bands: Patterns in the Genome , 1997 .

[54]  S. Gasser,et al.  Studies on scaffold attachment sites and their relation to genome function. , 1989, International review of cytology.

[55]  V A Zakian,et al.  Structure and function of telomeres. , 1989, Annual review of genetics.

[56]  C. Harrison,et al.  Scanning electron microscopy of variations in human metaphase chromosome structure revealed by Giemsa banding. , 1983, Cytogenetics and cell genetics.

[57]  A. Iino,et al.  Fibrous structures of human chromosomes observed by scanning electron microscopy. , 1982, Cytobios.

[58]  J. R. Paulson,et al.  Metaphase chromosome structure: the role of nonhistone proteins. , 1978, Cold Spring Harbor symposia on quantitative biology.

[59]  J. Sedat,et al.  A direct approach to the structure of eukaryotic chromosomes. , 1978, Cold Spring Harbor symposia on quantitative biology.

[60]  A. Iino Observations on human somatic chromosomes treated with hyaluronidase. , 1971, Cytogenetics.