A Visual Environment for Hypothesis Formation and Reasoning in Studies with fMRI and Multivariate Clinical Data

We present an interactive visual environment for linked analysis of brain imaging and clinical measurements. The environment is developed in an iterative participatory design process involving neur ...

[1]  Cosmin Toader,et al.  InTool Explorer: An Interactive Exploratory Analysis Tool for Versatile Visualizations of Neuroscientific Data , 2019, Front. Neuroanat..

[2]  Georgios Sakas,et al.  Data Intermixing and Multi‐volume Rendering , 1999, Comput. Graph. Forum.

[3]  Welch Bl THE GENERALIZATION OF ‘STUDENT'S’ PROBLEM WHEN SEVERAL DIFFERENT POPULATION VARLANCES ARE INVOLVED , 1947 .

[4]  Bernhard Preim,et al.  Interactive Visual Analysis of Heterogeneous Cohort-Study Data , 2014, IEEE Computer Graphics and Applications.

[5]  Charl P. Botha,et al.  BrainCove: A Tool for Voxel-wise fMRI Brain Connectivity Visualization , 2012, VCBM.

[6]  Tobias Isenberg,et al.  A Systematic Review on the Practice of Evaluating Visualization , 2013, IEEE Transactions on Visualization and Computer Graphics.

[7]  Harri Siirtola,et al.  Interacting with parallel coordinates , 2006, Interact. Comput..

[8]  Sara Jones,et al.  A Framework for Creative Visualization-Opportunities Workshops , 2018, IEEE Transactions on Visualization and Computer Graphics.

[9]  Bing Chen,et al.  An open science resource for establishing reliability and reproducibility in functional connectomics , 2014, Scientific Data.

[10]  Henrik Ohlsson,et al.  Concurrent Volume Visualization of Real-Time fMRI , 2010, VG@Eurographics.

[11]  Bernd Hamann,et al.  Brain Modulyzer: Interactive Visual Analysis of Functional Brain Connectivity , 2017, IEEE/ACM Transactions on Computational Biology and Bioinformatics.

[12]  Sara Jones,et al.  Creative User-Centered Visualization Design for Energy Analysts and Modelers , 2013, IEEE Transactions on Visualization and Computer Graphics.

[13]  S. Puli,et al.  Irritable Bowel Syndrome: A Clinical Review. , 2016, Current rheumatology reviews.

[14]  Allison Woodruff,et al.  Guidelines for using multiple views in information visualization , 2000, AVI '00.

[15]  James H. Oliver,et al.  A Multi-facetted Visual Analytics Tool for Exploratory Analysis of Human Brain and Function Datasets , 2016, Front. Neuroinform..

[16]  Eduard Gröller,et al.  Towards Quantitative Visual Analytics with Structured Brushing and Linked Statistics , 2016, Comput. Graph. Forum.

[17]  Anders Ynnerman,et al.  Correlated Photon Mapping for Interactive Global Illumination of Time-Varying Volumetric Data , 2017, IEEE Transactions on Visualization and Computer Graphics.

[18]  Paul J. Laurienti,et al.  An automated method for neuroanatomic and cytoarchitectonic atlas-based interrogation of fMRI data sets , 2003, NeuroImage.

[19]  Andrea Bergmann,et al.  Statistical Parametric Mapping The Analysis Of Functional Brain Images , 2016 .

[20]  T. Adali,et al.  Ieee Workshop on Machine Learning for Signal Processing Semi-blind Ica of Fmri: a Method for Utilizing Hypothesis-derived Time Courses in a Spatial Ica Analysis , 2022 .

[21]  Kai Lawonn,et al.  A Survey on Multimodal Medical Data Visualization , 2018, Comput. Graph. Forum.

[22]  D. Louis Collins,et al.  A new improved version of the realistic digital brain phantom , 2006, NeuroImage.

[23]  Kai Lawonn,et al.  Interactive Visual Analysis of Image-Centric Cohort Study Data , 2014, IEEE Transactions on Visualization and Computer Graphics.

[24]  Karl J. Friston,et al.  Statistical parametric mapping , 2013 .

[25]  Denis Gracanin,et al.  ComVis: A Coordinated Multiple Views System for Prototyping New Visualization Technology , 2008, 2008 12th International Conference Information Visualisation.

[26]  Robert K. Yin,et al.  Case Study Research and Applications: Design and Methods , 2017 .

[27]  Timo Ropinski,et al.  Inviwo — A Visualization System with Usage Abstraction Levels , 2018, IEEE Transactions on Visualization and Computer Graphics.

[28]  Thomas Höllt,et al.  BrainScope: interactive visual exploration of the spatial and temporal human brain transcriptome , 2017, Nucleic acids research.

[29]  Daniel Jönsson,et al.  Visual Analysis for Understanding Irritable Bowel Syndrome. , 2019, Advances in experimental medicine and biology.

[30]  J. Tukey,et al.  Variations of Box Plots , 1978 .

[31]  Steen Moeller,et al.  The Human Connectome Project: A data acquisition perspective , 2012, NeuroImage.

[32]  Krzysztof J. Gorgolewski,et al.  OpenNeuro – a free online platform for sharing and analysis of neuroimaging data , 2017 .

[33]  Susan L. Whitfield-Gabrieli,et al.  Conn: A Functional Connectivity Toolbox for Correlated and Anticorrelated Brain Networks , 2012, Brain Connect..

[34]  Anders Ynnerman,et al.  Efficient Ambient and Emissive Tissue Illumination using Local Occlusion in Multiresolution Volume Rendering , 2007, VG@Eurographics.

[35]  Neil Salkind,et al.  Using SPSS for Windows and Macintosh, Books a la Carte (8th Edition) , 2016 .

[36]  Jonathan C. Roberts,et al.  Visual comparison for information visualization , 2011, Inf. Vis..

[37]  Timo Ropinski,et al.  Historygrams: Enabling Interactive Global Illumination in Direct Volume Rendering using Photon Mapping , 2012, IEEE Transactions on Visualization and Computer Graphics.

[38]  C. Moore,et al.  Recommendations for Planning Pilot Studies in Clinical and Translational Research , 2011, Clinical and translational science.