Deamidation of glutaminyl and asparaginyl residues in peptides and proteins.

Publisher Summary This chapter discusses the deamidation of glutaminyl and asparaginyl residues in peptides and proteins. The occurrence of glutaminyl and asparaginyl residues in peptides and proteins is so widespread that these residues have become known as 2 of the 20 most commonly occurring amino acid residues. It has been hypothesized that these residues play static roles in protein structure and also play dynamic roles as molecular timers of biological events. Deamidation of glutaminyl and asparaginyl residues has been responsible for artifacts in peptide and protein chemistry. The rate of deamidation of these residues has been shown to be dependent upon primary sequence, secondary and tertiary structure, temperature, pH, ionic strength, and special intermolecular interactions. Deamidation has been found to occur in a wide variety of different proteins and may be expected to occur in most proteins under physiological conditions. Many of the essential processes in living things may be timed by deamidation of glutaminyl and asparaginyl residues. These molecular timers are under simple genetic control, are adjustable to many different timed intervals, and are easily implementable by means of the important changes that they can effect in the proteins in which they are included.