The Use of Object-Oriented Data Models for Biomolecular Databases

Note: invited paper Reference LSIR-CONF-2000-014 Record created on 2005-09-15, modified on 2017-05-12

[1]  Karl Aberer,et al.  Designing a User-Oriented Query Modification Facility in Object-Oriented Database Systems , 1994, CAiSE.

[2]  Jack A. Orenstein,et al.  The ObjectStore database system , 1991, CACM.

[3]  K. Nishikawa,et al.  Constructing a protein mutant database. , 1994, Protein engineering.

[4]  Peter M. D. Gray,et al.  Combining Computation with Database Access in Biomolecular Computing , 1994, ADB.

[5]  Karl Aberer,et al.  Integrating relational and object-oriented database systems using a metaclass concept , 1994, J. Syst. Integr..

[6]  Matthias Jarke,et al.  Query Optimization in Database Systems , 1984, CSUR.

[7]  Nathan Goodman,et al.  Building a Laboratory Information System Around a C++-Based Object-Oriented DBMS , 1994, VLDB.

[8]  David J. DeWitt,et al.  The Object-Oriented Database System Manifesto , 1994, Building an Object-Oriented Database System, The Story of O2.

[9]  G. Cameron,et al.  The EMBL data library. , 1988, Nucleic acids research.

[10]  Hans-Werner Mewes,et al.  An object-oriented sequence database definition language (SDDL) , 1993 .

[11]  Elisa Bertino,et al.  Object-Oriented Database Systems , 1993 .

[12]  Erich J. Neuhold,et al.  ViewSystem: integrating heterogeneous information bases by object-oriented views , 1990, [1990] Proceedings. Sixth International Conference on Data Engineering.

[13]  Erich J. Neuhold,et al.  Object-Oriented Modeling for Hypermedia Systems Using the VODAK Model Language , 1993, NATO ASI OODBS.

[14]  Matthew O. Ward,et al.  Managing Derived Data in the Gaea Scientific DBMS , 1993, VLDB.

[15]  Erich J. Neuhold,et al.  Database integration using the open object-oriented database system VODAK , 1995 .

[16]  A. Bairoch.  PROSITE: a dictionary of sites and patterns in proteins. , 1991, Nucleic acids research.

[17]  A. Bairoch,et al.  The SWISS-PROT protein sequence data bank. , 1991, Nucleic acids research.

[18]  Calton Pu,et al.  Design and application of PDBlib, a C++ macromolecular class library , 1994, Comput. Appl. Biosci..

[19]  Luca Cardelli,et al.  On understanding types, data abstraction, and polymorphism , 1985, CSUR.

[20]  Karl Aberer,et al.  Semantic query optimization for methods in object-oriented database systems , 1995, Proceedings of the Eleventh International Conference on Data Engineering.

[21]  Elisa Bertino,et al.  Object-Oriented Query Languages: The Notion and the Issues , 1992, IEEE Trans. Knowl. Data Eng..

[22]  James E. Rumbaugh,et al.  Object-Oriented Modelling and Design , 1991 .

[23]  L T Hunt,et al.  The PIR protein sequence database. , 1991, Nucleic acids research.

[24]  G J Williams,et al.  The Protein Data Bank: a computer-based archival file for macromolecular structures. , 1978, Archives of biochemistry and biophysics.

[25]  Gerhard Weikum,et al.  Semantic concurrency control in object-oriented database systems , 1993, Proceedings of IEEE 9th International Conference on Data Engineering.