Effect of length and rigidity of microtubules on the size of ring-shaped assemblies obtained through active self-organization.

The microtubule (MT)-kinesin biomolecular motor system has attracted considerable attention due to its possible applications in artificial biomachines. Recently, an active self-organization (AcSO) method has been established to integrate MT filaments into highly organized assembled structures. The ring-shaped MT assembly, one of the structures derived from the AcSO of MTs, can convert the translational motion of MTs into rotational motion. Due to this attractive feature, the ring-shaped MT assembly appears to be a promising candidate for developing artificial devices and for future nanotechnological applications. In this work, we have investigated the effect of length and rigidity of the MT filaments on the size of the ring-shaped MT assembly in the AcSO process. We show that the size of the ring-shaped MT assembly can be controlled by tuning the length and rigidity of MT filaments employed in the AcSO. Longer and stiffer MT filaments led to larger ring-shaped assemblies through AcSO, whereas AcSO of shorter and less stiff MT filaments produced smaller ring-shaped assemblies. This work might be important for the development of biomolecular motor based artificial biomachines, especially where size control of ring-shaped MT assembly will play an important role.

[1]  W. Marsden I and J , 2012 .

[2]  I. A. Telley,et al.  Processive kinesins require loose mechanical coupling for efficient collective motility , 2008, EMBO reports.

[3]  J. Howard,et al.  Mechanics of Motor Proteins and the Cytoskeleton , 2001 .

[4]  Jian Ping Gong,et al.  Growth of ring-shaped microtubule assemblies through stepwise active self-organisation , 2013 .

[5]  J. Gong,et al.  Controlled clockwise-counterclockwise motion of the ring-shaped microtubules assembly. , 2011, Biomacromolecules.

[6]  S. Wereley,et al.  soft matter , 2019, Science.

[7]  M. Castoldi,et al.  Purification of brain tubulin through two cycles of polymerization-depolymerization in a high-molarity buffer. , 2003, Protein expression and purification.

[8]  P. Dervan,et al.  Alternative heterocycles for DNA recognition: the benzimidazole/imidazole pair. , 2003, Chemistry.

[9]  A. Kakugo,et al.  Biomolecular motor modulates mechanical property of microtubule. , 2014, Biomacromolecules.

[10]  Ronald D Vale,et al.  The Directional Preference of Kinesin Motors Is Specified by an Element outside of the Motor Catalytic Domain , 1997, Cell.

[11]  H. Hess,et al.  Engineering the length distribution of microtubules polymerized in vitro , 2010 .

[12]  Viola Vogel,et al.  Molecular self-assembly of "nanowires"and "nanospools" using active transport. , 2005, Nano letters.

[13]  S. Takeuchi,et al.  Biomolecular-motor-based nano- or microscale particle translocations on DNA microarrays. , 2009, Nano letters.

[14]  J. Gilman,et al.  Nanotechnology , 2001 .

[15]  B. Mickey,et al.  Rigidity of microtubules is increased by stabilizing agents , 1995, The Journal of cell biology.

[16]  Jian Ping Gong,et al.  Prolongation of the active lifetime of a biomolecular motor for in vitro motility assay by using an inert atmosphere. , 2011, Langmuir : the ACS journal of surfaces and colloids.

[17]  J. Gong,et al.  How to integrate biological motors towards bio-actuators fueled by ATP. , 2011, Macromolecular bioscience.

[18]  A. MacLarnon,et al.  Comment on "The Brain of LB1, Homo floresiensis" , 2006, Science.

[19]  A. Hyman,et al.  Preparation of modified tubulins. , 1991, Methods in enzymology.

[20]  Zuzanna S Siwy,et al.  Learning Nature's Way: Biosensing with Synthetic Nanopores , 2007, Science.

[21]  N. Green [74] Spectrophotometric determination of avidin and biotin , 1970 .

[22]  宁北芳,et al.  疟原虫var基因转换速率变化导致抗原变异[英]/Paul H, Robert P, Christodoulou Z, et al//Proc Natl Acad Sci U S A , 2005 .

[23]  Yoshihito Osada,et al.  Microtubule bundle formation driven by ATP: the effect of concentrations of kinesin, streptavidin and microtubules , 2010, Nanotechnology.

[24]  Cees Dekker,et al.  Molecular Sorting by Electrical Steering of Microtubules in Kinesin-Coated Channels , 2006, Science.

[25]  G. Whitesides,et al.  Self-Assembly at All Scales , 2002, Science.

[26]  H. Hess,et al.  Controlling self-assembly of microtubule spools via kinesin motor density. , 2014, Soft matter.

[27]  G. G. Stokes "J." , 1890, The New Yale Book of Quotations.

[28]  R. Stephenson A and V , 1962, The British journal of ophthalmology.

[29]  Erik David Spoerke,et al.  Biomolecular Motor‐Powered Self‐Assembly of Dissipative Nanocomposite Rings , 2008 .

[30]  G. Borisy,et al.  Conjugation of fluorophores to tubulin , 2005, Nature Methods.

[31]  Anne Straube,et al.  Mechanical properties of doubly stabilized microtubule filaments. , 2013, Biophysical journal.

[32]  Matthew E. Downs,et al.  Microtubule nanospool formation by active self-assembly is not initiated by thermal activation , 2011 .

[33]  Yoshihito Osada,et al.  Gel Machines Constructed from Chemically Cross-linked Actins and Myosins , 2002 .

[34]  Jian Ping Gong,et al.  Formation of ring-shaped assembly of microtubules with a narrow size distribution at an air–buffer interface , 2012 .

[35]  Viola Vogel,et al.  Powering nanodevices with biomolecular motors. , 2004, Chemistry.

[36]  Cees Dekker,et al.  Motor Proteins at Work for Nanotechnology , 2007, Science.

[37]  G. Bachand,et al.  Effects of Confinement on Molecular Motor-Driven Self-Assembly of Ring Structures , 2013 .

[38]  Yoshihito Osada,et al.  Dynamic self-organization and polymorphism of microtubule assembly through active interactions with kinesin , 2011 .

[39]  Aaas News,et al.  Book Reviews , 1893, Buffalo Medical and Surgical Journal.

[40]  Y. Toyoshima,et al.  Formation of ring-shaped microtubule assemblies through active self-organization on dynein , 2014 .

[41]  J. Spudich,et al.  Fluorescent actin filaments move on myosin fixed to a glass surface. , 1986, Proceedings of the National Academy of Sciences of the United States of America.

[42]  J. Gong,et al.  Active self-organization of microtubules in an inert chamber system , 2012 .

[43]  Yoshihito Osada,et al.  Selective formation of a linear-shaped bundle of microtubules. , 2010, Langmuir : the ACS journal of surfaces and colloids.

[44]  Bartosz A Grzybowski,et al.  Principles and implementations of dissipative (dynamic) self-assembly. , 2006, The journal of physical chemistry. B.

[45]  Viola Vogel,et al.  Surface Imaging by Self-propelled Nanoscale Probes , 2002, Microscopy and Microanalysis.