High local and global diversity of Flavobacteria in marine plankton.
暂无分享,去创建一个
[1] Susan M. Huse,et al. Microbial diversity in the deep sea and the underexplored “rare biosphere” , 2006, Proceedings of the National Academy of Sciences.
[2] R. Amann,et al. Microbial community structure of sandy intertidal sediments in the North Sea, Sylt-Rømø Basin, Wadden Sea. , 2006, Systematic and applied microbiology.
[3] C. Pedrós-Alió. Marine microbial diversity: can it be determined? , 2006, Trends in microbiology.
[4] M. Tivey,et al. Bacterial and archaeal phylotypes associated with distinct mineralogical layers of a white smoker spire from a deep-sea hydrothermal vent site (9 degrees N, East Pacific Rise). , 2006, Environmental microbiology.
[5] Forest Rohwer,et al. FastGroupII: A web-based bioinformatics platform for analyses of large 16S rDNA libraries , 2006, BMC Bioinformatics.
[6] E. Delong,et al. Community Genomics Among Stratified Microbial Assemblages in the Ocean's Interior , 2006, Science.
[7] M. Cottrell,et al. Bacterial diversity of metagenomic and PCR libraries from the Delaware River. , 2005, Environmental microbiology.
[8] A. J. Jones,et al. At Least 1 in 20 16S rRNA Sequence Records Currently Held in Public Repositories Is Estimated To Contain Substantial Anomalies , 2005, Applied and Environmental Microbiology.
[9] J. Pinhassi,et al. Biogeographic analysis of ribosomal RNA clusters from marine bacterioplankton , 2005 .
[10] M. Simon,et al. Phylogeny of Proteobacteria and Bacteroidetes from oxic habitats of a tidal flat ecosystem. , 2005, FEMS microbiology ecology.
[11] J. Pernthaler,et al. Bacterial communities associated with benthic organic matter in headwater stream microhabitats. , 2005, Environmental microbiology.
[12] Jed A Fuhrman,et al. Coupling 16S-ITS rDNA clone libraries and automated ribosomal intergenic spacer analysis to show marine microbial diversity: development and application to a time series. , 2005, Environmental microbiology.
[13] J. Bowman,et al. Colonization and community dynamics of class Flavobacteria on diatom detritus in experimental mesocosms based on Southern Ocean seawater. , 2005, FEMS microbiology ecology.
[14] H. Grossart,et al. Marine diatom species harbour distinct bacterial communities. , 2005, Environmental microbiology.
[15] J. Handelsman,et al. Introducing DOTUR, a Computer Program for Defining Operational Taxonomic Units and Estimating Species Richness , 2005, Applied and Environmental Microbiology.
[16] James R. Cole,et al. The Ribosomal Database Project (RDP-II): sequences and tools for high-throughput rRNA analysis , 2004, Nucleic Acids Res..
[17] Robert K. Colwell,et al. A new statistical approach for assessing similarity of species composition with incidence and abundance data , 2004 .
[18] Francesc Peters,et al. Changes in Bacterioplankton Composition under Different Phytoplankton Regimens , 2004, Applied and Environmental Microbiology.
[19] Rudolf Amann,et al. Flow Sorting of Marine Bacterioplankton after Fluorescence In Situ Hybridization , 2004, Applied and Environmental Microbiology.
[20] S. Acinas,et al. Fine-scale phylogenetic architecture of a complex bacterial community , 2004, Nature.
[21] D. Emerson,et al. A Population Survey of Members of the Phylum Bacteroidetes Isolated from Salt Marsh Sediments along the East Coast of the United States , 2004, Microbial Ecology.
[22] O. White,et al. Environmental Genome Shotgun Sequencing of the Sargasso Sea , 2004, Science.
[23] K. Schleifer,et al. ARB: a software environment for sequence data. , 2004, Nucleic acids research.
[24] R. Amann,et al. Actinobacterial 16S rRNA genes from freshwater habitats cluster in four distinct lineages. , 2004, Environmental microbiology.
[25] J. Fry,et al. Distribution and culturability of the uncultivated 'AGG58 cluster' of the Bacteroidetes phylum in aquatic environments. , 2004, FEMS microbiology ecology.
[26] M. Cottrell,et al. Diversity and Abundance of Uncultured Cytophaga-Like Bacteria in the Delaware Estuary , 2003, Applied and Environmental Microbiology.
[27] R. Amann,et al. Diversity and Structure of Bacterial Communities in Arctic versus Antarctic Pack Ice , 2003, Applied and Environmental Microbiology.
[28] J. Wikner,et al. Combining Culture-Dependent and -Independent Methodologies for Estimation of Richness of Estuarine Bacterioplankton Consuming Riverine Dissolved Organic Matter , 2003, Applied and Environmental Microbiology.
[29] J. Hughes,et al. New approaches to analyzing microbial biodiversity data. , 2003, Current opinion in microbiology.
[30] C. Pedrós-Alió,et al. Seasonal changes in the taxonomic composition of bacterioplankton in a coastal oligotrophic system , 2003 .
[31] K. Zengler,et al. Cultivating the uncultured , 2002, Proceedings of the National Academy of Sciences of the United States of America.
[32] S. Blair Hedges,et al. The origin and evolution of model organisms , 2002, Nature Reviews Genetics.
[33] R. Amann,et al. Mesoscale distribution of dominant bacterioplankton groups in the northern North Sea in early summer , 2002 .
[34] F. Rohwer,et al. Use of 16S Ribosomal DNA for Delineation of Marine Bacterioplankton Species , 2002, Applied and Environmental Microbiology.
[35] K. Lewis,et al. Isolating "Uncultivable" Microorganisms in Pure Culture in a Simulated Natural Environment , 2002, Science.
[36] D. Kirchman. The ecology of Cytophaga-Flavobacteria in aquatic environments. , 2002, FEMS microbiology ecology.
[37] J. Hollibaugh,et al. Phylogenetic Composition of Bacterioplankton Assemblages from the Arctic Ocean , 2002, Applied and Environmental Microbiology.
[38] J. Wikner,et al. Phylogeny of Culturable Estuarine Bacteria Catabolizing Riverine Organic Matter in the Northern Baltic Sea , 2002, Applied and Environmental Microbiology.
[39] J. Fry,et al. New Degenerate Cytophaga-Flexibacter-Bacteroides-Specific 16S Ribosomal DNA-Targeted Oligonucleotide Probes Reveal High Bacterial Diversity in River Taff Epilithon , 2002, Applied and Environmental Microbiology.
[40] R. Amann,et al. Isolation of Novel Pelagic Bacteria from the German Bight and Their Seasonal Contributions to Surface Picoplankton , 2001, Applied and Environmental Microbiology.
[41] R. Amann,et al. Structure of bacterial communities in aquatic systems as revealed by filter PCR , 2001 .
[42] Victor Seguritan,et al. FastGroup: A program to dereplicate libraries of 16S rDNA sequences , 2001, BMC Bioinformatics.
[43] J. Hughes,et al. Counting the Uncountable: Statistical Approaches to Estimating Microbial Diversity , 2001, Applied and Environmental Microbiology.
[44] K. Nauhaus,et al. Multitude and temporal variability of ecological niches as indicated by the diversity of cultivated bacterioplankton. , 2001, FEMS microbiology ecology.
[45] R. Hill,et al. Phylogenetic Diversity of Bacteria Associated with the Marine Sponge Rhopaloeides odorabile , 2001, Applied and Environmental Microbiology.
[46] M. Cottrell,et al. Community Composition of Marine Bacterioplankton Determined by 16S rRNA Gene Clone Libraries and Fluorescence In Situ Hybridization , 2000, Applied and Environmental Microbiology.
[47] R. Amann,et al. Culturability and In Situ Abundance of Pelagic Bacteria from the North Sea , 2000, Applied and Environmental Microbiology.
[48] J. Pinhassi,et al. Biogeographical diversity among marine bacterioplankton , 2000 .
[49] F. Azam,et al. Dynamics of Bacterial Community Composition and Activity during a Mesocosm Diatom Bloom , 2000, Applied and Environmental Microbiology.
[50] R. Amann,et al. 16S rRNA-targeted oligonucleotide probes for the in situ detection of members of the phylum Cytophaga-Flavobacterium-Bacteroides. , 2000, Systematic and applied microbiology.
[51] M. Cottrell,et al. Natural Assemblages of Marine Proteobacteria and Members of the Cytophaga-Flavobacter Cluster Consuming Low- and High-Molecular-Weight Dissolved Organic Matter , 2000, Applied and Environmental Microbiology.
[52] K. Schleifer,et al. The domain-specific probe EUB338 is insufficient for the detection of all Bacteria: development and evaluation of a more comprehensive probe set. , 1999, Systematic and applied microbiology.
[53] R. Amann,et al. DIFFERENT COMMUNITY STRUCTURE AND TEMPERATURE OPTIMA OF HETEROTROPHIC PICOPLANKTON IN VARIOUS REGIONS OF THE SOUTHERN OCEAN , 1999 .
[54] R. Amann,et al. Microbial Community Composition of Wadden Sea Sediments as Revealed by Fluorescence In Situ Hybridization , 1998, Applied and Environmental Microbiology.
[55] U. Göbel,et al. Determination of microbial diversity in environmental samples: pitfalls of PCR-based rRNA analysis. , 1997, FEMS microbiology reviews.
[56] J. Bowman,et al. Novel Psychrobacter species from Antarctic ornithogenic soils. , 1996, International journal of systematic bacteriology.
[57] R Amann,et al. Application of a suite of 16S rRNA-specific oligonucleotide probes designed to investigate bacteria of the phylum cytophaga-flavobacter-bacteroides in the natural environment. , 1996, Microbiology.
[58] R A Clayton,et al. Intraspecific variation in small-subunit rRNA sequences in GenBank: why single sequences may not adequately represent prokaryotic taxa. , 1995, International journal of systematic bacteriology.
[59] Erko Stackebrandt,et al. Taxonomic Note: A Place for DNA-DNA Reassociation and 16S rRNA Sequence Analysis in the Present Species Definition in Bacteriology , 1994 .
[60] E. Delong,et al. Phylogenetic diversity of aggregate‐attached vs. free‐living marine bacterial assemblages , 1993 .
[61] A. Uitterlinden,et al. Profiling of complex microbial populations by denaturing gradient gel electrophoresis analysis of polymerase chain reaction-amplified genes coding for 16S rRNA , 1993, Applied and environmental microbiology.
[62] R. Wachter,et al. A proposal for the secondary structure of a variable area of eukaryotic small ribosomal subunit RNA involving the existence of a pseudoknot. , 1990, Nucleic acids research.
[63] J. Bowman,et al. Ecological and biogeographic relationships of class Flavobacteria in the Southern Ocean. , 2005, FEMS microbiology ecology.
[64] Jessica J Hellmann,et al. The application of rarefaction techniques to molecular inventories of microbial diversity. , 2005, Methods in enzymology.
[65] Y. van de Peer,et al. Compilation of small ribosomal subunit RNA sequences. , 1992, Nucleic Acids Research.