Multi-Level Canonical Correlation Analysis for Standard-Dose PET Image Estimation

Positron emission tomography (PET) images are widely used in many clinical applications, such as tumor detection and brain disorder diagnosis. To obtain PET images of diagnostic quality, a sufficient amount of radioactive tracer has to be injected into a living body, which will inevitably increase the risk of radiation exposure. On the other hand, if the tracer dose is considerably reduced, the quality of the resulting images would be significantly degraded. It is of great interest to estimate a standard-dose PET (S-PET) image from a low-dose one in order to reduce the risk of radiation exposure and preserve image quality. This may be achieved through mapping both S-PET and low-dose PET data into a common space and then performing patch-based sparse representation. However, a one-size-fits-all common space built from all training patches is unlikely to be optimal for each target S-PET patch, which limits the estimation accuracy. In this paper, we propose a data-driven multi-level canonical correlation analysis scheme to solve this problem. In particular, a subset of training data that is most useful in estimating a target S-PET patch is identified in each level, and then used in the next level to update common space and improve estimation. In addition, we also use multi-modal magnetic resonance images to help improve the estimation with complementary information. Validations on phantom and real human brain data sets show that our method effectively estimates S-PET images and well preserves critical clinical quantification measures, such as standard uptake value.

[1]  Richard M. Leahy,et al.  Non-Local Means Denoising of Dynamic PET Images , 2013, PloS one.

[2]  Anthonin Reilhac,et al.  Evaluation of Three MRI-Based Anatomical Priors for Quantitative PET Brain Imaging , 2012, IEEE Transactions on Medical Imaging.

[3]  Haibo Wang,et al.  Supervised Multi-View Canonical Correlation Analysis (sMVCCA): Integrating Histologic and Proteomic Features for Predicting Recurrent Prostate Cancer , 2015, IEEE Transactions on Medical Imaging.

[4]  Se Young Chun,et al.  Post-reconstruction non-local means filtering methods using CT side information for quantitative SPECT , 2013, Physics in medicine and biology.

[5]  Eero P. Simoncelli,et al.  Image quality assessment: from error visibility to structural similarity , 2004, IEEE Transactions on Image Processing.

[6]  Carole Lartizien,et al.  A lesion detection observer study comparing 2-dimensional versus fully 3-dimensional whole-body PET imaging protocols. , 2004, Journal of nuclear medicine : official publication, Society of Nuclear Medicine.

[7]  N. Tzourio-Mazoyer,et al.  Automated Anatomical Labeling of Activations in SPM Using a Macroscopic Anatomical Parcellation of the MNI MRI Single-Subject Brain , 2002, NeuroImage.

[8]  David Atkinson,et al.  Joint reconstruction of PET-MRI by exploiting structural similarity , 2014, Inverse Problems.

[9]  Dimitris Visvikis,et al.  PET Image Denoising Using a Synergistic Multiresolution Analysis of Structural (MRI/CT) and Functional Datasets , 2008, Journal of Nuclear Medicine.

[10]  Ulas Bagci,et al.  Highly precise partial volume correction for PET images: An iterative approach via shape consistency , 2015, 2015 IEEE 12th International Symposium on Biomedical Imaging (ISBI).

[11]  Paul Kinahan,et al.  Positron emission tomography-computed tomography standardized uptake values in clinical practice and assessing response to therapy. , 2010, Seminars in ultrasound, CT, and MR.

[12]  J. O'Brien,et al.  PET imaging of brain amyloid in dementia: a review , 2011, International journal of geriatric psychiatry.

[13]  Dinggang Shen,et al.  Multi-modality Canonical Feature Selection for Alzheimer's Disease Diagnosis , 2014, MICCAI.

[14]  Robert Jeraj,et al.  Impact of Different Standardized Uptake Value Measures on PET-Based Quantification of Treatment Response , 2013, The Journal of Nuclear Medicine.

[15]  Heinz-Peter Schlemmer,et al.  PET/MRI: Paving the Way for the Next Generation of Clinical Multimodality Imaging Applications , 2010, Journal of Nuclear Medicine.

[16]  Yihong Gong,et al.  Nonlinear Learning using Local Coordinate Coding , 2009, NIPS.

[17]  Wei Chen Clinical Applications of PET in Brain Tumors* , 2007, Journal of Nuclear Medicine.

[18]  Heinz Handels,et al.  Multispectral Image Registration Based on Local Canonical Correlation Analysis , 2014, MICCAI.

[19]  Dinggang Shen,et al.  LABEL: Pediatric brain extraction using learning-based meta-algorithm , 2012, NeuroImage.

[20]  David W Townsend,et al.  MRI-guided brain PET image filtering and partial volume correction , 2015, Physics in medicine and biology.

[21]  Yaozong Gao,et al.  Prediction of standard-dose brain PET image by using MRI and low-dose brain [18F]FDG PET images. , 2015, Medical physics.

[22]  Andrzej Król,et al.  Very low-dose adult whole-body tumor imaging with F-18 FDG PET/CT , 2015, Medical Imaging.

[23]  D. Louis Collins,et al.  Twenty New Digital Brain Phantoms for Creation of Validation Image Data Bases , 2006, IEEE Transactions on Medical Imaging.

[24]  Pierrick Coupé,et al.  An Optimized Blockwise Nonlocal Means Denoising Filter for 3-D Magnetic Resonance Images , 2008, IEEE Transactions on Medical Imaging.

[25]  Yaozong Gao,et al.  Prediction of Standard-Dose PET Image by Low-Dose PET and MRI Images , 2014, MLMI.

[26]  Liang Li,et al.  Recent Development of Dual-Dictionary Learning Approach in Medical Image Analysis and Reconstruction , 2015, Comput. Math. Methods Medicine.

[27]  Zaïd Harchaoui,et al.  Fast and Robust Archetypal Analysis for Representation Learning , 2014, 2014 IEEE Conference on Computer Vision and Pattern Recognition.

[28]  Uygar Tuna,et al.  Low count PET sinogram denoising , 2012, 2012 IEEE Nuclear Science Symposium and Medical Imaging Conference Record (NSS/MIC).

[29]  Soo-Jin Lee,et al.  Incorporating Anatomical Side Information Into PET Reconstruction Using Nonlocal Regularization , 2013, IEEE Transactions on Image Processing.

[30]  Tsuhan Chen,et al.  Robust Low-Dose CT Perfusion Deconvolution via Tensor Total-Variation Regularization , 2015, IEEE Transactions on Medical Imaging.

[31]  Brian B. Avants,et al.  Partial sparse canonical correlation analysis (PSCCA) for population studies in medical imaging , 2012, 2012 9th IEEE International Symposium on Biomedical Imaging (ISBI).

[32]  Vince D. Calhoun,et al.  Canonical Correlation Analysis for Data Fusion and Group Inferences , 2010, IEEE Signal Processing Magazine.

[33]  Dimitris Visvikis,et al.  Denoising of PET images by combining wavelets and curvelets for improved preservation of resolution and quantitation , 2013, Medical Image Anal..

[34]  Jing Tang,et al.  Anatomy assisted PET image reconstruction incorporating multi-resolution joint entropy. , 2015, Physics in medicine and biology.

[35]  Ulas Bagci,et al.  Denoising PET Images Using Singular Value Thresholding and Stein's Unbiased Risk Estimate , 2013, MICCAI.

[36]  D. Louis Collins,et al.  A new improved version of the realistic digital brain phantom , 2006, NeuroImage.

[37]  H. Hotelling Relations Between Two Sets of Variates , 1936 .

[38]  Chung Chan,et al.  Postreconstruction Nonlocal Means Filtering of Whole-Body PET With an Anatomical Prior , 2014, IEEE Transactions on Medical Imaging.

[39]  H. Malcolm Hudson,et al.  Accelerated image reconstruction using ordered subsets of projection data , 1994, IEEE Trans. Medical Imaging.

[40]  Alessandro Foi,et al.  Image Denoising by Sparse 3-D Transform-Domain Collaborative Filtering , 2007, IEEE Transactions on Image Processing.

[41]  D. Louis Collins,et al.  Patch-based segmentation using expert priors: Application to hippocampus and ventricle segmentation , 2011, NeuroImage.

[42]  Yihong Gong,et al.  Locality-constrained Linear Coding for image classification , 2010, 2010 IEEE Computer Society Conference on Computer Vision and Pattern Recognition.

[43]  Bart de Boer,et al.  Feasibility of low-dose FDG for whole-body TOF PET/CT oncologic workup , 2012 .

[44]  Jan Modersitzki,et al.  FLIRT: A Flexible Image Registration Toolbox , 2003, WBIR.