Toward Operational Mapping of Woody Canopy Cover in Tropical Savannas Using Google Earth Engine

Savanna woody plants can store significant amounts of carbon while also providing numerous other ecological and socio-economic benefits. However, they are significantly under-represented in widely used tree cover datasets, due to mapping challenges presented by their complex landscapes, and the underestimation of woody plants by methods that exclude short stature trees and shrubs. In this study, we describe a Google Earth Engine (GEE) application and present test case results for mapping percent woody canopy cover (%WCC) over a large savanna area. Relevant predictors of %WCC include information derived from radar backscatter (Sentinel-1) and optical reflectance (Sentinel-2), which are used in conjunction with plot level %WCC measurements to train and evaluate random forest models. We can predict %WCC at 40 m pixel resolution for the full extent of Senegal with a root mean square error of ∼8% (based on independent sample evaluation). Further examination of model results provides insights into method stability and potential generalizability. Annual median radar backscatter intensity is determined to be the most important satellite-based predictor of %WCC in savannas, likely due to its relatively strong response to non-leaf structural components of small woody plants which remain mostly constant across the wet and dry season. However, the best performing model combines radar backscatter metrics with optical reflectance indices that serve as proxies for greenness, dry biomass, burn incidence, plant water content, chlorophyll content, and seasonality. The primary use of GEE in the methodology makes it scalable and replicable by end-users with limited infrastructure for processing large remote sensing data.

[1]  Peter M. Vitousek,et al.  Nutrient Cycling and Nutrient Use Efficiency , 1982, The American Naturalist.

[2]  Ruth S. DeFries,et al.  Global continuous fields of vegetation characteristics: A linear mixture model applied to multi-year 8 km AVHRR data , 2000 .

[3]  David P. Roy,et al.  Adjustment of Sentinel-2 Multi-Spectral Instrument (MSI) Red-Edge Band Reflectance to Nadir BRDF Adjusted Reflectance (NBAR) and Quantification of Red-Edge Band BRDF Effects , 2017, Remote. Sens..

[4]  Peter J. Webster,et al.  A physical basis for the interannual variability of rainfall in the Sahel , 2007 .

[5]  B. Gao NDWI—A normalized difference water index for remote sensing of vegetation liquid water from space , 1996 .

[6]  R. Scholes,et al.  Tree-grass interactions in Savannas , 1997 .

[7]  J. Townshend,et al.  Towards an operational MODIS continuous field of percent tree cover algorithm: examples using AVHRR and MODIS data , 2002 .

[8]  Christiane Schmullius,et al.  Assessment of the mapping of fractional woody cover in southern African savannas using multi-temporal and polarimetric ALOS PALSAR L-band images , 2015 .

[9]  R. B. Jackson,et al.  Ecosystem carbon loss with woody plant invasion of grasslands , 2002, Nature.

[10]  R. DeFries,et al.  Classification trees: an alternative to traditional land cover classifiers , 1996 .

[11]  Stefano Ricci,et al.  Collect Earth: Land Use and Land Cover Assessment through Augmented Visual Interpretation , 2016, Remote. Sens..

[12]  N. Hanan,et al.  Estimation of Woody and Herbaceous Leaf Area Index in Sub‐Saharan Africa Using MODIS Data , 2018 .

[13]  S. Ruggles Integrated Public Use Microdata Series , 2021, Encyclopedia of Gerontology and Population Aging.

[14]  A. Diouf,et al.  Monitoring land-cover changes in semi-arid regions: remote sensing data and field observations in the Ferlo, Senegal , 2001 .

[15]  H. Behling,et al.  Environmental history of the Colombian savannas of the Llanos Orientales since the Last Glacial Maximum from lake records El Pinal and Carimagua , 1999 .

[16]  C. Tucker Red and photographic infrared linear combinations for monitoring vegetation , 1979 .

[17]  Yichun Xie,et al.  Remote sensing imagery in vegetation mapping: a review , 2008 .

[18]  Martin Brandt,et al.  Fodder Biomass Monitoring in Sahelian Rangelands Using Phenological Metrics from FAPAR Time Series , 2015, Remote. Sens..

[19]  Daniel W. Apley,et al.  Visualizing the effects of predictor variables in black box supervised learning models , 2016, Journal of the Royal Statistical Society: Series B (Statistical Methodology).

[20]  Guy F. Midgley,et al.  A proposed CO2‐controlled mechanism of woody plant invasion in grasslands and savannas , 2000 .

[21]  D. Barrett,et al.  Estimating fractional cover of photosynthetic vegetation, non-photosynthetic vegetation and bare soil in the Australian tropical savanna region upscaling the EO-1 Hyperion and MODIS sensors. , 2009 .

[22]  Martin Brandt,et al.  Human population growth offsets climate-driven increase in woody vegetation in sub-Saharan Africa , 2017, Nature Ecology &Evolution.

[23]  J. Friedman Greedy function approximation: A gradient boosting machine. , 2001 .

[24]  C. Schaaf,et al.  Relationships between vegetation indices, fractional cover retrievals and the structure and composition of Brazilian Cerrado natural vegetation , 2017 .

[25]  Sanath Sathyachandran Kumar,et al.  Trends in Woody and Herbaceous Vegetation in the Savannas of West Africa , 2019, Remote. Sens..

[26]  Hankui K. Zhang,et al.  Examination of Sentinel-2A Multi-spectral Instrument (MSI) Reflectance Anisotropy and the Suitability of a General Method to Normalize MSI Reflectance to Nadir BRDF Adjusted Reflectance , 2017 .

[27]  N. Benson,et al.  Landscape Assessment: Ground measure of severity, the Composite Burn Index; and Remote sensing of severity, the Normalized Burn Ratio , 2006 .

[28]  J. A. Ratter,et al.  The Brazilian Cerrado Vegetation and Threats to its Biodiversity , 1997 .

[29]  T. Kuemmerle,et al.  Mapping continuous fields of tree and shrub cover across the Gran Chaco using Landsat 8 and Sentinel-1 data , 2018, Remote Sensing of Environment.

[30]  Martin Brandt,et al.  Assessing woody vegetation trends in Sahelian drylands using MODIS based seasonal metrics , 2016 .

[31]  Martin Brandt,et al.  Woody plant cover estimation in drylands from Earth Observation based seasonal metrics , 2016 .

[32]  Sanath Sathyachandran Kumar,et al.  Alternative Vegetation States in Tropical Forests and Savannas: The Search for Consistent Signals in Diverse Remote Sensing Data , 2019, Remote. Sens..

[33]  N. Hanan,et al.  Tree effects on grass growth in savannas: competition, facilitation and the stress‐gradient hypothesis , 2013 .

[34]  Christopher Conrad,et al.  Estimating the fractional cover of growth forms and bare surface in savannas. A multi-resolution approach based on regression tree ensembles. , 2013 .

[35]  J. Townshend,et al.  A new global 1‐km dataset of percentage tree cover derived from remote sensing , 2000 .

[36]  P. Werner,et al.  Savanna ecology and management : Australian perspectives and intercontinental comparisons , 1991 .

[37]  Crystal B. Schaaf,et al.  Dynamics of the relationship between NDVI and SWIR32 vegetation indices in southern Africa: implications for retrieval of fractional cover from MODIS data , 2016 .

[38]  Kelly K. Caylor,et al.  Determinants of woody cover in African savannas , 2005, Nature.

[39]  R. Scott,et al.  ECOHYDROLOGICAL IMPLICATIONS OF WOODY PLANT ENCROACHMENT , 2005 .

[40]  Leo Breiman,et al.  Random Forests , 2001, Machine Learning.

[41]  E. Nezry,et al.  Adaptive speckle filters and scene heterogeneity , 1990 .

[42]  G. Foody,et al.  Sub-pixel land cover composition estimation using a linear mixture model and fuzzy membership functions , 1994 .

[43]  A. Huete,et al.  The use of vegetation indices in forested regions: issues of linearity and saturation , 1997, IGARSS'97. 1997 IEEE International Geoscience and Remote Sensing Symposium Proceedings. Remote Sensing - A Scientific Vision for Sustainable Development.

[44]  S. Higgins,et al.  When is a ‘forest’ a savanna, and why does it matter? , 2011 .

[45]  Lara Prihodko,et al.  On regreening and degradation in Sahelian watersheds , 2015, Proceedings of the National Academy of Sciences.

[46]  Heather Reese,et al.  Mapping Tree Canopy Cover and Aboveground Biomass in Sudano-Sahelian Woodlands Using Landsat 8 and Random Forest , 2015, Remote. Sens..

[47]  J. Townshend,et al.  Global discrimination of land cover types from metrics derived from AVHRR pathfinder data , 1995 .

[48]  Gaël Varoquaux,et al.  Scikit-learn: Machine Learning in Python , 2011, J. Mach. Learn. Res..

[49]  Chengquan Huang,et al.  Global, 30-m resolution continuous fields of tree cover: Landsat-based rescaling of MODIS vegetation continuous fields with lidar-based estimates of error , 2013, Int. J. Digit. Earth.

[50]  N. Hanan,et al.  Fire in sub‐Saharan Africa: The fuel, cure and connectivity hypothesis , 2018 .

[51]  A. Strahler,et al.  Monitoring vegetation phenology using MODIS , 2003 .

[52]  J. Michaelsen,et al.  The climate hazards infrared precipitation with stations—a new environmental record for monitoring extremes , 2015, Scientific Data.

[53]  Niall P. Hanan,et al.  Agroforestry in the Sahel , 2018, Nature Geoscience.

[54]  M. Friedl,et al.  Land Surface Phenology from MODIS: Characterization of the Collection 5 Global Land Cover Dynamics Product , 2010 .

[55]  D. Sims,et al.  Relationships between leaf pigment content and spectral reflectance across a wide range of species, leaf structures and developmental stages , 2002 .

[56]  Michael Dixon,et al.  Google Earth Engine: Planetary-scale geospatial analysis for everyone , 2017 .

[57]  Gregory P. Asner,et al.  Unsustainable fuelwood extraction from South African savannas , 2013 .