Complete Chloroplast Genome Sequence of an Engelmann Spruce (Picea engelmannii, Genotype Se404-851) from Western Canada

Engelmann spruce (Picea engelmannii) is a conifer found primarily on the west coast of North America. Here, we present the complete chloroplast genome sequence of Picea engelmannii genotype Se404-851. This chloroplast sequence will benefit future conifer genomic research and contribute resources to further species conservation efforts. ABSTRACT Engelmann spruce (Picea engelmannii) is a conifer found primarily on the west coast of North America. Here, we present the complete chloroplast genome sequence of Picea engelmannii genotype Se404-851. This chloroplast sequence will benefit future conifer genomic research and contribute resources to further species conservation efforts.

[1]  Dmitry Antipov,et al.  Versatile genome assembly evaluation with QUAST-LG , 2018, Bioinform..

[2]  Richard A. Moore,et al.  Clinical outcomes after whole genome sequencing in patients with metastatic non-small cell lung cancer. , 2017 .

[3]  Axel Fischer,et al.  GeSeq – versatile and accurate annotation of organelle genomes , 2017, Nucleic Acids Res..

[4]  Justin Chu,et al.  ABySS 2.0: resource-efficient assembly of large genomes using a Bloom filter , 2016, bioRxiv.

[5]  Steven J. M. Jones,et al.  Assembly of the Complete Sitka Spruce Chloroplast Genome Using 10X Genomics’ GemCode Sequencing Data , 2016, PloS one.

[6]  Richard A. Moore,et al.  Response to angiotensin blockade with irbesartan in a patient with metastatic colorectal cancer , 2016, Annals of oncology : official journal of the European Society for Medical Oncology.

[7]  Steven J. M. Jones,et al.  Organellar Genomes of White Spruce (Picea glauca): Assembly and Annotation , 2015, Genome biology and evolution.

[8]  David Bryant,et al.  Endosymbiotic origin and differential loss of eukaryotic genes , 2015, Nature.

[9]  René L. Warren,et al.  Sealer: a scalable gap-closing application for finishing draft genomes , 2015, BMC Bioinformatics.

[10]  Christina A. Cuomo,et al.  Pilon: An Integrated Tool for Comprehensive Microbial Variant Detection and Genome Assembly Improvement , 2014, PloS one.

[11]  Inanç Birol,et al.  Assembling the 20 Gb white spruce (Picea glauca) genome from whole-genome shotgun sequencing data , 2013, Bioinform..

[12]  Marc Lohse,et al.  OrganellarGenomeDRAW—a suite of tools for generating physical maps of plastid and mitochondrial genomes and visualizing expression data sets , 2013, Nucleic Acids Res..

[13]  Y. El-Kassaby,et al.  Inheritance of chloroplast and mitochondrial DNA in Picea and composition of hybrids from introgression zones , 1991, Theoretical and Applied Genetics.

[14]  E. Myers,et al.  Basic local alignment search tool. , 1990, Journal of molecular biology.

[15]  Claude-Alain H. Roten,et al.  Fast and accurate short read alignment with Burrows–Wheeler transform , 2009, Bioinform..