Simulation‐based estimation of branching models for LTR retrotransposons
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Stéphane Chrétien | Christophe Guyeux | Serge Moulin | Nicolas Seux | Emmanuelle Lerat | S. Chrétien | E. Lerat | C. Guyeux | S. Moulin | Nicolas Seux
[1] L. Wahl,et al. Extinction probabilities and stationary distributions of mobile genetic elements in prokaryotes: The birth-death-diversification model. , 2015, Theoretical population biology.
[2] V. A. Epanechnikov. Non-Parametric Estimation of a Multivariate Probability Density , 1969 .
[3] D. Hartl,et al. Distribution and abundance of insertion sequences among natural isolates of Escherichia coli. , 1987, Genetics.
[4] B. Mcclintock. The origin and behavior of mutable loci in maize , 1950, Proceedings of the National Academy of Sciences.
[5] Christus,et al. A General Method Applicable to the Search for Similarities in the Amino Acid Sequence of Two Proteins , 2022 .
[6] Andreas Wagner,et al. Evolutionary dynamics of the LTR retrotransposons roo and rooA inferred from twelve complete Drosophila genomes , 2009, BMC Evolutionary Biology.
[7] J. Bennetzen,et al. A unified classification system for eukaryotic transposable elements , 2007, Nature Reviews Genetics.
[8] Harold W. Kuhn,et al. The Hungarian method for the assignment problem , 1955, 50 Years of Integer Programming.
[9] M. Ashburner,et al. The transposable elements of the Drosophila melanogaster euchromatin: a genomics perspective , 2002, Genome Biology.
[10] Xabier Bello,et al. Widespread evidence for horizontal transfer of transposable elements across Drosophila genomes , 2008, Genome Biology.
[11] C. Mungall,et al. The Release 5.1 Annotation of Drosophila melanogaster Heterochromatin , 2007, Science.
[12] Emmanuelle Lerat,et al. Comparative analysis of transposable elements in the melanogaster subgroup sequenced genomes. , 2011, Gene.
[13] J. V. Moran,et al. Initial sequencing and analysis of the human genome. , 2001, Nature.
[14] T Darden,et al. Evolution and extinction of transposable elements in Mendelian populations. , 1985, Genetics.
[15] Timothy J. Foster,et al. Three Tn10-associated excision events: Relationship to transposition and role of direct and inverted repeats , 1981, Cell.
[16] Stephen M. Mount,et al. The genome sequence of Drosophila melanogaster. , 2000, Science.
[17] J. Munkres. ALGORITHMS FOR THE ASSIGNMENT AND TRANSIORTATION tROBLEMS* , 1957 .
[18] D. Berg,et al. Excision of transposon Tn5 is dependent on the inverted repeats but not on the transposase function of Tn5. , 1981, Proceedings of the National Academy of Sciences of the United States of America.
[19] P. Deininger,et al. Mammalian non-LTR retrotransposons: for better or worse, in sickness and in health. , 2008, Genome research.
[20] M E Moody,et al. A branching process model for the evolution of transposable elements , 1988, Journal of mathematical biology.
[21] M. Barbara,et al. The discovery of characterization of transposable elements : the collected papers of Barbara McClintock , 1987 .
[22] Natalie P. Flynn,et al. Evolution and extinction. , 1989, Philosophical transactions of the Royal Society of London. Series B, Biological sciences.
[23] W. Cleveland,et al. Locally Weighted Regression: An Approach to Regression Analysis by Local Fitting , 1988 .
[24] Emmanuelle Lerat,et al. Sequence divergence within transposable element families in the Drosophila melanogaster genome. , 2003, Genome research.
[25] Franck Picard,et al. A New Genome-Wide Method to Track Horizontally Transferred Sequences: Application to Drosophila , 2014, Genome biology and evolution.
[26] D. Finnegan,et al. Eukaryotic transposable elements and genome evolution. , 1989, Trends in genetics : TIG.
[27] Phillip SanMiguel,et al. Evidence that a Recent Increase in Maize Genome Size was Caused by the Massive Amplification of Intergene Retrotransposons , 1998 .