Structural Studies on Prokaryotic Cytochromes P450

The camphor monooxygenase from Pseudomonas putida, P450cam, has been the single best paradigm for P450 structure and function studies for over two decades.1 Following a wealth of biochemical and biophysical studies on P450cam, the high-resolution crystal structure became available in 1987.2 This was followed by a series of structures on various inhibitor/substrate complexes which revealed some key structure-function relationships in P450s. In addition, with the development of recombinant expression systems for P450cam, it has been possible to use site-directed mutagenesis3,4 with reference to the crystal structure to probe questions of how structure relates to function.

[1]  T. Poulos,et al.  Structure of cytochrome P450eryF involved in erythromycin biosynthesis , 1995, Nature Structural Biology.

[2]  J. Peone,et al.  Molecular oxygen adducts of transition metal complexes , 1973 .

[3]  J. Andersen,et al.  Substrate specificity of 6-deoxyerythronolide B hydroxylase, a bacterial cytochrome P450 of erythromycin A biosynthesis. , 1993, Biochemistry.

[4]  J. Peterson Camphor binding by Pseudomonas putida cytochrome P-450 , 1971 .

[5]  T. Poulos,et al.  Modeling protein-substrate interactions in the heme domain of cytochrome P450(BM-3). , 1994, Acta crystallographica. Section D, Biological crystallography.

[6]  B. Luke,et al.  Theoretical Studies of Cytochrome P-450 , 1986 .

[7]  T. Poulos,et al.  Characterization of recombinant Bacillus megaterium cytochrome P-450 BM-3 and its two functional domains. , 1991, The Journal of biological chemistry.

[8]  B C Finzel,et al.  Crystal structure of substrate-free Pseudomonas putida cytochrome P-450. , 1986, Biochemistry.

[9]  T. Poulos,et al.  Preliminary crystallographic analysis of an enzyme involved in erythromycin biosynthesis: Cytochrome P450eryF , 1994, Proteins.

[10]  S. Martinis,et al.  Crystal structure of the cytochrome P-450CAM active site mutant Thr252Ala. , 1991, Biochemistry.

[11]  J. Kraut Serine proteases: structure and mechanism of catalysis. , 1977, Annual review of biochemistry.

[12]  S. Sligar,et al.  Molecular recognition in cytochrome P-450: Alteration of regioselective alkane hydroxylation via protein engineering , 1989 .

[13]  S. Sligar,et al.  Catalytic mechanism of cytochrome P-450: evidence for a distal charge relay , 1992 .

[14]  S. Sligar,et al.  The cytochrome P-450cam binding surface as defined by site-directed mutagenesis and electrostatic modeling. , 1990, Biochemistry.

[15]  J Deisenhofer,et al.  Crystal structure of hemoprotein domain of P450BM-3, a prototype for microsomal P450's. , 1993, Science.

[16]  H Koga,et al.  Uncoupling of the cytochrome P-450cam monooxygenase reaction by a single mutation, threonine-252 to alanine or valine: possible role of the hydroxy amino acid in oxygen activation. , 1989, Proceedings of the National Academy of Sciences of the United States of America.

[17]  R. Raag,et al.  Inhibitor-induced conformational change in cytochrome P-450CAM. , 1993, Biochemistry.

[18]  S. Sligar,et al.  A thermodynamic model of regulation: modulation of redox equilibria in camphor monoxygenase. , 1976, Proceedings of the National Academy of Sciences of the United States of America.

[19]  J Deisenhofer,et al.  Crystal structure and refinement of cytochrome P450terp at 2.3 A resolution. , 1994, Journal of molecular biology.

[20]  R. Raag,et al.  Crystal structures of cytochrome P-450CAM complexed with camphane, thiocamphor, and adamantane: factors controlling P-450 substrate hydroxylation. , 1991, Biochemistry.

[21]  B. Luke,et al.  Theoretical studies of cytochrome P-450. Characterization of stable and transient active states, reaction mechanisms and substrate-enzyme interactions. , 1986, Enzyme.

[22]  J. Dawson,et al.  Probing structure-function relations in heme-containing oxygenases and peroxidases. , 1988, Science.

[23]  Rebecca C. Wade Solvation of the active site of cytochrome P450-cam , 1990, J. Comput. Aided Mol. Des..

[24]  T. Poulos,et al.  Crystallographic refinement of lignin peroxidase at 2 A. , 1993, The Journal of biological chemistry.

[25]  C. Di Primo,et al.  Mutagenesis of a single hydrogen bond in cytochrome P-450 alters cation binding and heme solvation. , 1990, The Journal of biological chemistry.

[26]  T. Poulos,et al.  Putidaredoxin competitively inhibits cytochrome b5-cytochrome P-450cam association: a proposed molecular model for a cytochrome P-450cam electron-transfer complex. , 1989, Biochemistry.

[27]  S. Sligar,et al.  The roles of active site hydrogen bonding in cytochrome P-450cam as revealed by site-directed mutagenesis. , 1988, The Journal of biological chemistry.

[28]  R. Raag,et al.  The structural basis for substrate-induced changes in redox potential and spin equilibrium in cytochrome P-450CAM. , 1991, Biochemistry.

[29]  C. Hutchinson,et al.  Purification and reconstitution of the electron transport components for 6-deoxyerythronolide B hydroxylase, a cytochrome P-450 enzyme of macrolide antibiotic (erythromycin) biosynthesis , 1988, Journal of bacteriology.

[30]  M. Marden,et al.  The pressure dependence of the spin equilibrium in camphor-bound ferric cytochrome P-450. , 2005, European journal of biochemistry.

[31]  T. Poulos,et al.  Role of the proximal ligand in peroxidase catalysis. Crystallographic, kinetic, and spectral studies of cytochrome c peroxidase proximal ligand mutants. , 1994, The Journal of biological chemistry.

[32]  N. Kunishima,et al.  Crystal structure of the fungal peroxidase from Arthromyces ramosus at 1.9 A resolution. Structural comparisons with the lignin and cytochrome c peroxidases. , 1994, Journal of molecular biology.

[33]  J. Kraut,et al.  Histidine 52 is a critical residue for rapid formation of cytochrome c peroxidase compound I. , 1993, Biochemistry.

[34]  Andrew Howard,et al.  Crystal structures of metyrapone- and phenylimidazole-inhibited complexes of cytochrome P-450cam , 1993 .

[35]  S V Evans,et al.  SETOR: hardware-lighted three-dimensional solid model representations of macromolecules. , 1993, Journal of molecular graphics.

[36]  S. Martinis,et al.  A conserved residue of cytochrome P-450 is involved in heme-oxygen stability and activation , 1989 .

[37]  S. Sligar,et al.  Regioselectivity in the cytochromes P-450: control by protein constraints and by chemical reactivities. , 1984, Archives of biochemistry and biophysics.

[38]  P. Kraulis A program to produce both detailed and schematic plots of protein structures , 1991 .

[39]  P. R. Montellano Catalytic sites of hemoprotein peroxidases. , 1992 .

[40]  D. Nelson,et al.  On the membrane topology of vertebrate cytochrome P-450 proteins. , 1988, The Journal of biological chemistry.

[41]  R. Raag,et al.  Crystal structure of the carbon monoxide-substrate-cytochrome P-450CAM ternary complex. , 1989, Biochemistry.

[42]  R. Raag,et al.  Inhibitor-induced conformational change in cytochrome P450cam , 1992 .

[43]  T. Poulos,et al.  Conversion of the proximal histidine ligand to glutamine restores activity to an inactive mutant of cytochrome c peroxidase. , 1992, The Journal of biological chemistry.

[44]  Mark T. Fisher,et al.  Control of heme protein redox potential and reduction rate: linear free energy relation between potential and ferric spin state equilibrium , 1985 .

[45]  T. Poulos,et al.  High-resolution crystal structure of cytochrome P450cam. , 1987, Journal of molecular biology.

[46]  H. Wariishi,et al.  Oxidation of monomethoxylated aromatic compounds by lignin peroxidase: role of veratryl alcohol in lignin biodegradation. , 1990, Biochemistry.

[47]  C. Hutchinson,et al.  Macrolide antibiotic biosynthesis: isolation and properties of two forms of 6-deoxyerythronolide B hydroxylase from Saccharopolyspora erythraea (Streptomyces erythreus). , 1987, Biochemistry.