Diurnal dynamics of water flow through trees: design and validation of a mathematical flow and storage model

[1]  T. H. Honert,et al.  Water transport in plants as a catenary process , 1948 .

[2]  F. Ewers,et al.  The hydraulic architecture of trees and other woody plants , 1991 .

[3]  R. Ketcham,et al.  Acquisition, optimization and interpretation of X-ray computed tomographic imagery: applications to the geosciences , 2001 .

[4]  Robert Helsel.  Visual programming with HP VEE (3rd ed.) , 1998 .

[5]  N. Welander,et al.  The influence of shading on growth and morphology in seedlings of Quercus robur L. and Fagus sylvatica L. , 1998 .

[6]  E. Nikinmaa,et al.  Sugar transport together with environmental conditions controls time lags between xylem and stem diameter changes , 2003 .

[7]  John A. Nelder,et al.  A Simplex Method for Function Minimization , 1965, Comput. J..

[8]  G Goldstein,et al.  Water transport in trees: current perspectives, new insights and some controversies. , 2001, Environmental and experimental botany.

[9]  Jean Dauzat,et al.  Simulation of leaf transpiration and sap flow in virtual plants: model description and application to a coffee plantation in Costa Rica. , 2001 .

[10]  John S. Sperry,et al.  Intra‐ and inter‐plant variation in xylem cavitation in Betula occidentalis , 1994 .

[11]  Patric Jacobs,et al.  Principles of computerised X-ray tomography and applications to building materials , 1995 .

[12]  Isabelle Braud,et al.  A simple soil-plant-atmosphere transfer model (SiSPAT) development and field verification , 1995 .

[13]  F. Tatarinov,et al.  Daily and seasonal variation of stem radius in oak , 1999 .

[14]  R. Zimmermann,et al.  Canopy transpiration and water fluxes in the xylem of the trunk of Larix and Picea trees — a comparison of xylem flow, porometer and cuvette measurements , 1985, Oecologia.

[15]  L. O. Lindgren Lic. Tech.,et al.  Medical CAT-scanning: X-ray absorption coefficients, CT-numbers and their relation to wood density , 2004, Wood Science and Technology.

[16]  Timm Weitkamp,et al.  Tomography studies of human foreskin fibroblasts on polymer yarns , 2003 .

[17]  H. Falcon-Lang.  A Method To Distinguish Between Woods Produced By Evergreen And Deciduous Coniferopsids On The Basis Of Growth Ring Anatomy: A New Palaeoecological Tool , 2000 .

[18]  U. Zimmermann,et al.  Comparative measurements of the xylem pressure ofNicotiana plants by means of the pressure bomb and pressure probe , 1990, Planta.

[19]  D J Cosgrove,et al.  Assembly and enlargement of the primary cell wall in plants. , 1997, Annual review of cell and developmental biology.

[20]  R. Samson,et al.  Effects of Osmotic Drought Stress Induced by a Combination of NaCl and Polyethylene Glycol on Leaf Water Status, Photosynthetic Gas Exchange, and Water Use Efficiency of Pistacia khinjuk and P. mutica , 2002, Photosynthetica.

[21]  T. Simonneau,et al.  Diurnal Changes in Stem Diameter Depend Upon Variations in Water Content: Direct Evidence in Peach Trees , 1993 .

[22]  Liukang Xu,et al.  Sensitivity of growth of roots versus leaves to water stress: biophysical analysis and relation to water transport. , 2000, Journal of experimental botany.

[23]  D. Wildenschilda,et al.  Using X-ray computed tomography in hydrology : systems , resolutions , and limitations , 2002 .

[24]  M. Zimmermann.  Xylem Structure and the Ascent of Sap , 1983, Springer Series in Wood Science.

[25]  P. Tomlinson,et al.  Analysis of Complex Vascular Systems in Plants: Optical Shuttle Method , 1966, Science.

[26]  Erik L Ritman,et al.  The use of microcomputed tomography to study microvasculature in small rodents. , 2002, American journal of physiology. Regulatory, integrative and comparative physiology.

[27]  C. Ganter,et al.  Xylem water content and wood density in spruce and oak trees detected by high-resolution computed tomography. , 2001, Plant physiology.

[28]  C. Leuschner,et al.  Leaf water relations of competitive Fagus sylvatica and Quercus petraea trees during 4 years differing in soil drought , 2000 .

[29]  P. Berbigier,et al.  Transpiration of a 64-year old maritime pine stand in Portugal , 1996, Oecologia.

[30]  Tetsuo Sakuratani,et al.  A heat balance method for measuring water flux in the stem of intact plants , 1981 .

[31]  U. Hacke,et al.  Xylem dysfunction during winter and recovery of hydraulic conductivity in diffuse-porous and ring-porous trees , 1996, Oecologia.

[32]  T. Hsiao,et al.  The pressure‐jump technique shows maize leaf growth to be enhanced by increases in turgor only when water status is not too high , 1998 .

[33]  M. J. B. DAVY,et al.  Water Transport , 1947, Nature.

[34]  R. Zweifel,et al.  Stem radius changes and their relation to stored water in stems of young Norway spruce trees , 2000, Trees.

[35]  P. Young,et al.  Modelling of Water Movement in Trees , 1985 .

[36]  Yoshikazu Kobayashi,et al.  Water flow and hydraulic characteristics of Japanese red pine and oak trees , 2001 .

[37]  R. Häsler,et al.  Diurnal changes in the radius of a subalpine Norway spruce stem: their relation to the sap flow and their use to estimate transpiration , 1995, Trees.

[38]  M. G. Ryan,et al.  Reliance on stored water increases with tree size in three species in the Pacific Northwest. , 2003, Tree physiology.

[39]  S. Marsili-Libelli,et al.  Confidence regions of estimated parameters for ecological systems , 2003 .

[40]  F. Ewers,et al.  Hydraulic, biomechanical, and anatomical interactions of xylem from five species of Acer (Aceraceae). , 2003, American journal of botany.

[41]  D. Grosser.  Die Hölzer Mitteleuropas , 1977 .

[42]  J. Roy,et al.  Effects of tension wood on specific conductivity and vulnerability to embolism of Quercus ilex seedlings grown at two atmospheric CO2 concentrations. , 2003, Tree physiology.

[43]  F. Peyrin,et al.  Microstructure and transport properties of porous building materials. II: Three-dimensional X-ray tomographic studies , 2000 .

[44]  Gábor Székely,et al.  Non-destructive three-dimensional evaluation of a polymer sponge by micro-tomography using synchrotron radiation. , 2002, Biomolecular engineering.

[45]  T. Hsiao,et al.  Physiological Responses to Moderate Water Stress , 1982 .

[46]  S. Allen,et al.  Measurement of sap flow in plant stems , 1996 .

[47]  J. Lockhart.  An analysis of irreversible plant cell elongation. , 1965, Journal of theoretical biology.

[48]  C. Atkinson,et al.  Effects of elevated CO2 on stem growth, vessel area and hydraulic conductivity of oak and cherry seedlings , 1996 .

[49]  R. Zweifel,et al.  Dynamics of water storage in mature subalpine Picea abies: temporal and spatial patterns of change in stem radius. , 2001, Tree physiology.

[50]  J. W. Worthington,et al.  Comparison of Trunk and Branch Sap Flow with Canopy Transpiration in Pecan , 1990 .

[51]  J G Huguet,et al.  A biophysical analysis of stem and root diameter variations in woody plants. , 2001, Plant physiology.

[52]  Serge Rambal,et al.  Non-steady-state modelling of water transfer in a Mediterranean evergreen canopy , 2001 .

[53]  S. L. Wellington,et al.  Tomographic imaging of three‐phase flow experiments , 1987 .

[54]  M. C. Nichols,et al.  X-Ray Tomographic Microscopy (XTM) Using Synchrotron Radiation , 1992 .

[55]  H. Mayer,et al.  Radiation modifies the effect of water availability on the carbon isotope composition of beech (Fagus sylvatica) , 2001 .

[56]  L. Simmonds,et al.  Including the heat storage term in sap flow measurements with the stem heat balance method , 1995 .

[57]  W. Cummins,et al.  Growth rate and turgor pressure: auxin effect studies with an automated apparatus for single coleoptiles. , 1974, Plant physiology.

[58]  M. Tyree,et al.  Water-storage capacity ofThuja, Tsuga andAcer stems measured by dehydration isotherms , 1990, Planta.

[59]  H. L. Penman.  Natural evaporation from open water, bare soil and grass , 1948, Proceedings of the Royal Society of London. Series A. Mathematical and Physical Sciences.

[60]  Veerle Cnudde,et al.  Use of X-ray computed microtomography for non-invasive determination of wood anatomical characteristics. , 2004, Journal of structural biology.

[61]  S. O. Prasher,et al.  Three‐Dimensional Quantification of Macropore Networks in Undisturbed Soil Cores , 1999 .

[62]  R. Tognetti,et al.  Diurnal water relations of beech (Fagus Sylvatica L.) trees in the mountains of Italy , 1997 .

[63]  H. Jones.  Physicochemical and Environmental Plant Physiology, 2nd edn. , 1999 .

[64]  C. Jacquiot,et al.  Atlas d'anatomie des bois des angiospermes (essences feuillues) , 1973 .

[65]  K. King,et al.  Measurement of sap flow by the heat balance method: numerical analysis and application to coniferous seedlings , 1992 .

[66]  G. Fogg.  The state and movement of water in living organisms. , 1966, Journal of the Marine Biological Association of the United Kingdom.

[67]  H. V. Neher.  Effects of pressures inside Monterey pine trees , 1993, Trees.

[68]  H. Sachsse.  Einheimische Nutzhölzer und ihre Bestimmung nach makroskopischen Merkmalen , 1984 .

[69]  J. Sperry,et al.  Xylem embolism in response to freeze-thaw cycles and water stress in ring-porous, diffuse-porous, and conifer species. , 1992, Plant physiology.

[70]  R. Lemeur,et al.  An experimental system for analysis of the dynamic sap-flow characteristics in young trees: results of a beech tree. , 2004, Functional plant biology : FPB.

[71]  F. Schweingruber,et al.  LIGHT SHORTAGE AS A MODIFYING FACTOR FOR GROWTH DYNAMICS AND WOOD ANATOMY IN YOUNG DECIDUOUS TREES , 2002 .

[72]  E. Steudle,et al.  Water ascent in plants: do ongoing controversies have a sound basis? , 1999, Trends in plant science.

[73]  J. Morison,et al.  Sensing and mis‐sensing the eclipse , 2000 .

[74]  I. R. Cowan.  Transport of Water in the Soil-Plant-Atmosphere System , 1965 .

[75]  O. Renner.  Zum Nachweis negativer Drucke im Gefäßwasser bewurzelter Holzgewächse. , 1925 .

[76]  P B Green,et al.  Metabolic and physical control of cell elongation rate: in vivo studies in nitella. , 1971, Plant physiology.

[77]  M. Balooch,et al.  Both hPTH(1–34) and bFGF Increase Trabecular Bone Mass in Osteopenic Rats but They Have Different Effects on Trabecular Bone Architecture , 2003, Journal of bone and mineral research : the official journal of the American Society for Bone and Mineral Research.

[78]  T S Smith,et al.  Three‐dimensional microimaging (MRμI and μCT), finite element modeling, and rapid prototyping provide unique insights into bone architecture in osteoporosis , 2001, The Anatomical record.

[79]  A. Granier.  Une nouvelle méthode pour la mesure du flux de sève brute dans le tronc des arbres , 1985 .

[80]  E. Steudle,et al.  Water uptake by roots: effects of water deficit. , 2000, Journal of experimental botany.

[81]  T. Fujii.  Application of a Resin Casting Method to Wood Anatomy of Some Japanese Fagaceae Species , 1993 .

[82]  G. Farquhar,et al.  Water Relations Link Carbon and Oxygen Isotope Discrimination to Phloem Sap Sugar Concentration in Eucalyptus globulus , 2003, Plant Physiology.

[83]  J. Monteith.  Evaporation and environment. , 1965, Symposia of the Society for Experimental Biology.

[84]  Fernando Valladares,et al.  The greater seedling high-light tolerance of Quercus robur over Fagus sylvatica is linked to a greater physiological plasticity , 2002, Trees.

[85]  Peter Gasson,et al.  Anatomy of European Woods. An Atlas for the Identification of European Trees, Shrubs and Dwarf Shrubs , 1990 .

[86]  D. Grosser,et al.  Die Hölzer Mitteleuropas : ein mikrophotographischer Lehratlas , 1977 .

[87]  G. Goldstein,et al.  Whole-tree water transport scales with sapwood capacitance in tropical forest canopy trees , 2003 .

[88]  P. Burrough,et al.  Principles of geographical information systems , 1998 .

[89]  S. Wofsy,et al.  Modelling the soil-plant-atmosphere continuum in a Quercus-Acer stand at Harvard Forest : the regulation of stomatal conductance by light, nitrogen and soil/plant hydraulic properties , 1996 .

[90]  M. Canny.  A New Theory for the Ascent of Sap—Cohesion Supported by Tissue Pressure , 1995 .

[91]  Robert W. Pearcy,et al.  Plant Physiological Ecology , 1989, Springer Netherlands.

[92]  C. Lovisolo,et al.  Effects of water stress on vessel size and xylem hydraulic conductivity in Vitis vinifera L. , 1998 .

[93]  F. Molz,et al.  On the Mechanism of Water-Stress-Induced Stem Deformation1 , 1973 .

[94]  H. Jones,et al.  Resistance to Water Loss from the Mesophyll Cell Surface in Plant Leaves , 1980 .

[95]  Ke Xu,et al.  Microstructure and transport properties of porous building materials , 1998 .

[96]  T Vesala,et al.  Tree stem diameter variations and transpiration in Scots pine: an analysis using a dynamic sap flow model. , 2001, Tree physiology.

[97]  L. Simmonds,et al.  Sap flow measurements from stem heat balances: a comparison of constant with variable power methods , 1995 .

[98]  R. Zweifel,et al.  Link between diurnal stem radius changes and tree water relations. , 2001, Tree physiology.

[99]  C. H. M. van Bavel,et al.  Measurement of mass flow of water in the stems of herbaceous plants , 1987 .

[100]  C. Osmond,et al.  Encyclopedia of plant physiology. New series. Volume 12B. Physiological plant ecology II. Water relations and carbon assimilation. , 2011 .

[101]  Frederick C. Meinzer,et al.  Stem water storage and diurnal patterns of water use in tropical forest canopy trees , 1998 .

[102]  C. Moyne,et al.  Un modèle simplifié de transfert de chaleur et de masse dans le système sol-plante-atmosphère , 1998 .

[103]  C. Osmond,et al.  Physiological Plant Ecology I , 1981, Encyclopedia of Plant Physiology.

[104]  J. Grace,et al.  Continuous measurements of water tensions in the xylem of trees based on the elastic properties of wood , 1997, Planta.

[105]  Kathy Steppe,et al.  Sap flow dynamics of a beech tree during the solar eclipse of 11 August 1999 , 2002 .

[106]  H. Dixon,et al.  Ascent of Sap , 1894, Nature.

[107]  Richard H. Waring,et al.  The contribution of stored water to transpiration in Scots pine , 1979 .

[108]  R. Slatyer.  Aspects of the tissue water relationships of an important arid zone species ( Acacia aneura F. Muell.) in comparison with two mesophytes. , 1960 .

[109]  M. Tyree,et al.  A dynamic model for water flow in a single tree: evidence that models must account for hydraulic architecture. , 1988, Tree physiology.

[110]  J. Huguet,et al.  Appréciation de l'état hydrique d'une plante à partir des variations micrométriques de la dimension des fruits ou des tiges au cours de la journée , 1985 .

[111]  S. Allen,et al.  Measurements of transpiration from savannah shrubs using sap flow gauges , 1995 .

[112]  P. Jarvis,et al.  A dynamic model for studying flow of water in single trees. , 1986, Tree physiology.

[113]  Maurizio Mencuccini,et al.  Biomechanical and hydraulic determinants of tree structure in Scots pine: anatomical characteristics. , 1997, Tree physiology.

[114]  H. Jones.  MODELLING DIURNAL TRENDS OF LEAF WATER POTENTIAL IN TRANSPIRING WHEAT , 1978 .

[115]  R. Johnson,et al.  SUBSTANTIAL ERRORS IN ESTIMATES OF SAP FLOW USING THE HEAT BALANCE TECHNIQUE ON WOODY STEMS UNDER FIELD CONDITIONS , 1992 .

[116]  Hervé Cochard,et al.  Field comparison of transpiration, stomatal conductance and vulnerability to cavitation of Quercus petraea and Quercus robur under water stress , 1993 .

[117]  S. Kikuta,et al.  Osmotic potential of Norway spruce [Picea abies (L.) Karst.] secondary phloem in relation to anatomy , 2001, Trees.

[118]  A. Katchalsky,et al.  Nonequilibrium Thermodynamics in Biophysics , 1965 .

[119]  G. Riechers.  Plants and Microclimate , 1984 .

[120]  Betsy A. Dowd,et al.  High-resolution microtomography for density and spatial information about wood structures , 1999, Optics & Photonics.

[121]  P. Nobel,et al.  Transpiration stream of desert species: resistances and capacitances for a C3, a C4, and a CAM plant , 1983 .

[122]  P. Rosier,et al.  Comparative estimates of transpiration of ash and beech forest at a chalk site in southern Britain , 1994 .

[123]  J. Sperry,et al.  Canny's compensating pressure theory fails a test. , 1999, American journal of botany.

[124]  Veva Elwell,et al.  Toxicity and Anti-Inflammatory Activity of Phenolic-Rich Extract from Nopalea cochenillifera (Cactaceae): A Preclinical Study on the Prevention of Inflammatory Bowel Diseases , 2023, Plants.

[125]  Abhijit Nagchaudhuri,et al.  Time constant for water transport in loblolly pine trees estimated from time series of evaporative demand and stem sapflow , 1997, Trees.

[126]  J. Landsberg,et al.  Studies on the Movement of Water Through Apple Trees , 1976 .

[127]  K. McNaughton,et al.  Observations of night-time water use in kiwifruit vines and apple trees , 1989 .

[128]  E. Nikinmaa,et al.  Relationships between embolism, stem water tension, and diameter changes. , 2002, Journal of theoretical biology.

[129]  D. Hall.  Photosynthesis and production in a changing environment : a field and laboratory manual , 1993 .

[130]  E. Nikinmaa,et al.  Time lags for xylem and stem diameter variations in a Scots pine tree , 2002 .

[131]  F De Carlo,et al.  Three-dimensional microarchitecture of the plates (primary, secondary, and carinar process) in the developing tooth of Lytechinus variegatus revealed by synchrotron X-ray absorption microtomography (microCT). , 2003, Journal of structural biology.

[132]  K. Radoglou,et al.  Physiological responses of beech and sessile oak in a natural mixed stand during a dry summer. , 2002, Annals of botany.

[133]  Barbara L. Gartner,et al.  Patterns of xylem variation within a tree and their hydraulic and mechanical consequences , 1995 .

[134]  J. Domec,et al.  Relationship between growth rates and xylem hydraulic characteristics in young, mature and old-growth ponderosa pine trees , 2003 .

[135]  L. Feldkamp,et al.  Practical cone-beam algorithm , 1984 .

[136]  E. D. Ford,et al.  Modeling tree water flow as an unsaturated flow through a porous medium. , 2002, Journal of theoretical biology.

[137]  S. L. Steinberg.  A Gauge to Measure Mass Flow Rate of Sap in Stems and Trunks of Woody Plants , 1989, Journal of the American Society for Horticultural Science.

[138]  Bingru Huang,et al.  Supraoptimal Soil Temperatures Induced Oxidative Stress in Leaves of Creeping Bentgrass Cultivars Differing in Heat Tolerance , 2001 .

[139]  W. Ruhland.  Encyclopedia of plant physiology. , 1958 .

[140]  Hans Vangheluwe,et al.  WEST: modelling biological wastewater treatment , 2003 .

[141]  P. F. Scholander,et al.  Sap Pressure in Vascular Plants , 1965, Science.

[142]  J. Sperry,et al.  New evidence for large negative xylem pressures and their measurement by the pressure chamber method , 1996 .

[143]  J. Durand,et al.  Changes in axial hydraulic conductivity along elongating leaf blades in relation to xylem maturation in tall fescue. , 2000, The New phytologist.

[144]  D. C. Spanner,et al.  The Peltier Effect and its Use in the Measurement of Suction Pressure , 1951 .

[145]  Paul J. Thomas,et al.  Synchrotron-based micro-CT of in-situ biological basic functional units and their integration , 1997, Optics & Photonics.

[146]  Stan D. Wullschleger,et al.  A review of whole-plant water use studies in tree. , 1998, Tree physiology.

[147]  S. Running,et al.  Extrapolating plant water flow resistances and capacitances to regional scales , 1991 .

[148]  P. Campanello,et al.  Axial and radial water transport and internal water storage in tropical forest canopy trees , 2002, Oecologia.

[149]  P. Jarvis,et al.  Water in Tissues and Cells , 1982 .

[150]  Jon D. Johnson,et al.  Ecophysiological responses of Fagus sylvatica seedlings to changing light conditions. I. Interactions between photosynthetic acclimation and photoinhibition during simulated canopy gap formation , 1997 .

[151]  F. Schweingruber.  Anatomy of European woods. , 1990 .

[152]  M. Canny,et al.  Applications of the compensating pressure theory of water transport. , 1998, American journal of botany.

[153]  H. Schultz,et al.  Xylem development and hydraulic conductance in sun and shade shoots of grapevine (Vitis vinifera L.): evidence that low light uncouples water transport capacity from leaf area , 1993, Planta.

[154]  F. L. Sinclair,et al.  Sources of error in stem heat balance sap flow measurements , 1999 .

[155]  Kristel Michielsen,et al.  Morphological image analysis , 2000 .

[156]  Edward Hanna.  Meteorological effects of the solar eclipse of 11 August 1999 , 2000 .

[157]  S. Stock,et al.  X-ray microCT study of pyramids of the sea urchin Lytechinus variegatus. , 2003, Journal of structural biology.

[158]  M. Wu,et al.  Principles of environmental physics , 2004, Plant Growth Regulation.

[159]  K. Boersma,et al.  An improved stem heat balance method using analog heat control , 1995 .

[160]  N. Holbrook,et al.  Water balance in the arborescent palm, Sabal palmetto. I. Stem structure, tissue water release properties and leaf epidermal conductance , 1992 .

[161]  E. Steudle,et al.  The essentials of direct xylem pressure measurement , 2001 .

[162]  Kathy Steppe,et al.  X-ray micro-computed tomography: a powerful tool to study the stem specific hydraulic conductivity of young trees , 2003 .

[163]  Pierre Soille,et al.  Morphological Image Analysis: Principles and Applications , 2003 .

[164]  S. Jansen,et al.  Preparation of wood specimens for transmitted light microscopy and scanning electron microscopy , 1998 .

[165]  A. Haase,et al.  Xylem water transport: is the available evidence consistent with the cohesion theory? , 1994 .

[166]  N. Turner,et al.  Phase and amplitude relations between transpiration, water potential and stem shrinkage , 1985 .

[167]  Martine Wevers,et al.  Towards 3-D petrography: application of microfocus computer tomography in geological science , 2001 .

[168]  Melvin T. Tyree,et al.  The Cohesion-Tension theory of sap ascent: current controversies , 1997 .

[169]  M. Zimmermann,et al.  The Theory and Practice of Measuring Transport Coefficients and Sap Flow in the Xylem of Red Maple Stems (Acer rubrum) , 1971 .

[170]  Hervé Cochard,et al.  Developmental control of xylem hydraulic resistances and vulnerability to embolism in Fraxinus excelsior L.: impacts on water relations , 1997 .

[171]  Peter Reichert,et al.  Practical identifiability of ASM2d parameters--systematic selection and tuning of parameter subsets. , 2002, Water research.

[172]  Hervé Cochard,et al.  Whole tree hydraulic conductance and water loss regulation in Quercus during drought: evidence for stomatal control of embolism? , 1996 .