Prospects of In vivo Incorporation of Non-canonical Amino Acids for the Chemical Diversification of Antimicrobial Peptides
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Nediljko Budisa | Oscar P. Kuipers | Tobias Baumann | Andrius Buivydas | O. Kuipers | N. Budisa | Maike Bartholomae | Jessica H. Nickling | Andrius Buivydas | T. Baumann | M. Bartholomae
[1] W. A. van der Donk,et al. Biosynthetic investigation of phomopsins reveals a widespread pathway for ribosomal natural products in Ascomycetes , 2016, Proceedings of the National Academy of Sciences.
[2] Rohit K. Sharma,et al. Alkylated histidine based short cationic antifungal peptides: synthesis, biological evaluation and mechanistic investigations , 2016 .
[3] O. Kuipers,et al. Incorporation of tryptophan analogues into the lantibiotic nisin , 2016, Amino Acids.
[4] J. Vederas,et al. Synthesis of the lantibiotic lactocin S using peptide cyclizations on solid phase. , 2010, Journal of the American Chemical Society.
[5] P. Dorrestein,et al. Legonaridin, a new member of linaridin RiPP from a Ghanaian Streptomyces isolate. , 2015, Organic and biomolecular chemistry.
[6] X. Yang,et al. Production of Lantipeptides in Escherichia coli , 2010, Journal of the American Chemical Society.
[7] G. Norris,et al. The glycocins: in a class of their own. , 2016, Current opinion in structural biology.
[8] R. P. Ross,et al. The generation of nisin variants with enhanced activity against specific Gram‐positive pathogens , 2008, Molecular microbiology.
[9] G. Bierbaum,et al. Lantibiotics: promising candidates for future applications in health care. , 2014, International journal of medical microbiology : IJMM.
[10] Peter G Schultz,et al. An expanded genetic code with a functional quadruplet codon. , 2004, Proceedings of the National Academy of Sciences of the United States of America.
[11] A. Driessen,et al. Lantibiotic structures as guidelines for the design of peptides that can be modified by lantibiotic enzymes. , 2005, Biochemistry.
[12] H. Vogel,et al. Recombinant expression, antimicrobial activity and mechanism of action of tritrpticin analogs containing fluoro-tryptophan residues. , 2016, Biochimica et biophysica acta.
[13] M. Seleem,et al. Targeting intracellular pathogenic bacteria with unnatural proline-rich peptides: coupling antibacterial activity with macrophage penetration. , 2013, Angewandte Chemie.
[14] Peter G. Schultz,et al. Genomically Recoded Organisms Expand Biological Functions , 2013, Science.
[15] C. Eckerskorn,et al. High-level biosynthetic substitution of methionine in proteins by its analogs 2-aminohexanoic acid, selenomethionine, telluromethionine and ethionine in Escherichia coli. , 1995, European journal of biochemistry.
[16] C. Walsh,et al. Nonproteinogenic amino acid building blocks for nonribosomal peptide and hybrid polyketide scaffolds. , 2013, Angewandte Chemie.
[17] W. A. van der Donk,et al. Facile Removal of Leader Peptides from Lanthipeptides by Incorporation of a Hydroxy Acid. , 2015, Journal of the American Chemical Society.
[18] Meng Xiong,et al. Rational Evolution of Antimicrobial Peptides Containing Unnatural Amino Acids to Combat Burn Wound Infections , 2016, Chemical biology & drug design.
[19] H. Suga,et al. Ribosome-mediated synthesis of natural product-like peptides via cell-free translation. , 2016, Current opinion in chemical biology.
[20] Oscar P. Kuipers,et al. BAGEL3: automated identification of genes encoding bacteriocins and (non-)bactericidal posttranslationally modified peptides , 2013, Nucleic Acids Res..
[21] W. A. van der Donk,et al. Follow the leader: the use of leader peptides to guide natural product biosynthesis. , 2010, Nature chemical biology.
[22] Jeffery M. Tharp,et al. Expanding the chemical diversity of lasso peptide MccJ25 with genetically encoded noncanonical amino acids. , 2015, Chemical communications.
[23] Yan Wang,et al. Computer-aided design, structural dynamics analysis, and in vitro susceptibility test of antibacterial peptides incorporating unnatural amino acids against microbial infections , 2016, Comput. Methods Programs Biomed..
[24] Nediljko Budisa,et al. Coupling Bioorthogonal Chemistries with Artificial Metabolism: Intracellular Biosynthesis of Azidohomoalanine and Its Incorporation into Recombinant Proteins , 2014, Molecules.
[25] T. G. Villa,et al. Antimicrobial peptides (AMPs): Ancient compounds that represent novel weapons in the fight against bacteria. , 2017, Biochemical pharmacology.
[26] Tamara L. Kinzer-Ursem,et al. Incorporation of non-canonical amino acids into the developing murine proteome , 2016, Scientific Reports.
[27] O. Kuipers,et al. Increasing the success rate of lantibiotic drug discovery by Synthetic Biology , 2012, Expert opinion on drug discovery.
[28] S. Nair,et al. Structure and mechanism of the tRNA-dependent lantibiotic dehydratase NisB , 2014, Nature.
[29] N. Budisa,et al. Site‐Directed and Global Incorporation of Orthogonal and Isostructural Noncanonical Amino Acids into the Ribosomal Lasso Peptide Capistruin , 2015, Chembiochem : a European journal of chemical biology.
[30] N. Budisa. Expanded genetic code for the engineering of ribosomally synthetized and post-translationally modified peptide natural products (RiPPs). , 2013, Current opinion in biotechnology.
[31] N. Budisa,et al. Towards Biocontained Cell Factories: An Evolutionarily Adapted Escherichia coli Strain Produces a New-to-nature Bioactive Lantibiotic Containing Thienopyrrole-Alanine , 2016, Scientific Reports.
[32] H. Fujita,et al. Total synthesis of peptide antibiotic nisin , 1988 .
[33] M. Finn,et al. Click chemistry in complex mixtures: bioorthogonal bioconjugation. , 2014, Chemistry & biology.
[34] R. Hicks. Antibacterial and anticancer activity of a series of novel peptides incorporating cyclic tetra-substituted C(α) amino acids. , 2016, Bioorganic & medicinal chemistry.
[35] P. Schultz,et al. An evolved aminoacyl-tRNA synthetase with atypical polysubstrate specificity. , 2011, Biochemistry.
[36] Liujie Huo,et al. Discovery and Characterization of Bicereucin, an Unusual d-Amino Acid-Containing Mixed Two-Component Lantibiotic , 2016, Journal of the American Chemical Society.
[37] P G Schultz,et al. Expanding the Genetic Code of Escherichia coli , 2001, Science.
[38] M. Blaskovich. Unusual Amino Acids in Medicinal Chemistry. , 2016, Journal of medicinal chemistry.
[39] M. Ibba,et al. Multiple Quality Control Pathways Limit Non-protein Amino Acid Use by Yeast Cytoplasmic Phenylalanyl-tRNA Synthetase* , 2016, The Journal of Biological Chemistry.
[40] Kai Blin,et al. antiSMASH 3.0—a comprehensive resource for the genome mining of biosynthetic gene clusters , 2015, Nucleic Acids Res..
[41] Auke J van Heel,et al. Discovery, Production and Modification of Five Novel Lantibiotics Using the Promiscuous Nisin Modification Machinery. , 2016, ACS synthetic biology.
[42] G. Church,et al. Performance of optimized noncanonical amino acid mutagenesis systems in the absence of release factor 1. , 2016, Molecular bioSystems.
[43] S. Nair,et al. Structure and Mechanism of the Lantibiotic Cyclase Involved in Nisin Biosynthesis , 2006, Science.
[44] Li Di,et al. Strategic Approaches to Optimizing Peptide ADME Properties , 2014, The AAPS Journal.
[45] V. Noireaux,et al. Genetically expanded cell‐free protein synthesis using endogenous pyrrolysyl orthogonal translation system , 2015, Biotechnology and bioengineering.
[46] M. Marahiel,et al. Lasso peptides: an intriguing class of bacterial natural products. , 2015, Accounts of chemical research.
[47] Yongkang He,et al. Molecular design and genetic optimization of antimicrobial peptides containing unnatural amino acids against antibiotic‐resistant bacterial infections , 2016, Biopolymers.
[48] T. Steitz,et al. Structure of pyrrolysyl-tRNA synthetase, an archaeal enzyme for genetic code innovation , 2007, Proceedings of the National Academy of Sciences.
[49] T. Steitz,et al. Polyspecific pyrrolysyl-tRNA synthetases from directed evolution , 2014, Proceedings of the National Academy of Sciences.
[50] O. Kuipers,et al. Biosynthesis, immunity, regulation, mode of action and engineering of the model lantibiotic nisin , 2008, Cellular and Molecular Life Sciences.
[51] G. Jung. Lantibiotica ‐ ribosomal synthetisierte Polypeptidwirkstoffe mit Sulfidbrücken und α,β‐Didehydroaminosäuren , 1991 .
[52] P. G. Arnison,et al. Ribosomally synthesized and post-translationally modified peptide natural products: overview and recommendations for a universal nomenclature. , 2013, Natural product reports.
[53] V. Giaccone,et al. Antimicrobial resistance: A global emerging threat to public health systems , 2017, Critical reviews in food science and nutrition.
[54] N. Budisa,et al. Energetic contribution to both acidity and conformational stability in peptide models , 2016 .
[55] P. Sampson,et al. Use of analogues of methionine and methionyl adenylate to sample conformational changes during catalysis in Escherichia coli methionyl-tRNA synthetase. , 2003, Journal of molecular biology.
[56] R. Rink,et al. To protect peptide pharmaceuticals against peptidases. , 2010, Journal of pharmacological and toxicological methods.
[57] J. Vederas,et al. Solid supported chemical syntheses of both components of the lantibiotic lacticin 3147. , 2011, Journal of the American Chemical Society.
[58] R. Vitorino,et al. Antimicrobial peptides: an alternative for innovative medicines? , 2015, Applied Microbiology and Biotechnology.
[59] Hidetoshi Teramoto,et al. Incorporation of Methionine Analogues Into Bombyx mori Silk Fibroin for Click Modifications. , 2015, Macromolecular bioscience.
[60] P. Schultz,et al. A versatile platform for single- and multiple-unnatural amino acid mutagenesis in Escherichia coli. , 2013, Biochemistry.
[61] Leif Smith,et al. Multipronged approach for engineering novel peptide analogues of existing lantibiotics , 2015, Expert opinion on drug discovery.
[62] O. Kuipers,et al. The Presence of Modifiable Residues in the Core Peptide Part of Precursor Nisin Is Not Crucial for Precursor Nisin Interactions with NisB- and NisC , 2013, PloS one.
[63] A. Chopin. Organization and regulation of genes for amino acid biosynthesis in lactic acid bacteria. , 1993, FEMS microbiology reviews.
[64] Gerald Striedner,et al. High-level biosynthesis of norleucine in E. coli for the economic labeling of proteins. , 2016, Journal of biotechnology.
[65] O. Kuipers,et al. Employing the promiscuity of lantibiotic biosynthetic machineries to produce novel antimicrobials , 2017, FEMS microbiology reviews.
[66] P. Schultz,et al. Recombinant thiopeptides containing noncanonical amino acids , 2016, Proceedings of the National Academy of Sciences.
[67] O. Kuipers,et al. Dissection and Modulation of the Four Distinct Activities of Nisin by Mutagenesis of Rings A and B and by C-Terminal Truncation , 2007, Applied and Environmental Microbiology.
[68] C. Hill,et al. Bioengineering Lantibiotics for Therapeutic Success , 2015, Front. Microbiol..
[69] P. Neubauer,et al. Lanthipeptides: chemical synthesis versus in vivo biosynthesis as tools for pharmaceutical production , 2016, Microbial Cell Factories.
[70] B. Brandsdal,et al. Targeting the S1 and S3 subsite of trypsin with unnatural cationic amino acids generates antimicrobial peptides with potential for oral administration. , 2012, Journal of medicinal chemistry.
[71] A. Yamaguchi,et al. Highly reproductive Escherichia coli cells with no specific assignment to the UAG codon , 2015, Scientific Reports.
[72] V. Noireaux,et al. Residue-specific Incorporation of Noncanonical Amino Acids into Model Proteins Using an Escherichia coli Cell-free Transcription-translation System , 2016, Journal of visualized experiments : JoVE.