Modeling large fluctuations of thousands of clones during hematopoiesis: The role of stem cell self-renewal and bursty progenitor dynamics in rhesus macaque
暂无分享,去创建一个
Song Xu | Tom Chou | Sanggu Kim | Irvin S Y Chen | T. Chou | I. Chen | Song Xu | Sanggu Kim
[1] Ivar Østby,et al. A mathematical model for reconstitution of granulopoiesis after high dose chemotherapy with autologous stem cell transplantation , 2003, Journal of mathematical biology.
[2] Gerald de Haan,et al. Counting stem cells: methodological constraints , 2012, Nature Methods.
[3] Fabien Crauste,et al. Mathematical model of hematopoiesis dynamics with growth factor-dependent apoptosis and proliferation regulations , 2009, Math. Comput. Model..
[4] Jacques Bélair,et al. Oscillations in cyclical neutropenia: new evidence based on mathematical modeling. , 2003, Journal of theoretical biology.
[5] A. Presson,et al. High-Throughput, Sensitive Quantification of Repopulating Hematopoietic Stem Cell Clones , 2010, Journal of Virology.
[6] Peter Guttorp,et al. Evidence that the number of hematopoietic stem cells per animal is conserved in mammals. , 2002, Blood.
[7] Peter Guttorp,et al. Hematopoietic stem-cell behavior in nonhuman primates. , 2007, Blood.
[8] H. Sieburg,et al. Predicting clonal self-renewal and extinction of hematopoietic stem cells , 2011, Proceedings of the National Academy of Sciences.
[9] Anna K. Marciniak-Czochra,et al. Characterization of stem cells using mathematical models of multistage cell lineages , 2011, Math. Comput. Model..
[10] Laurent Pujo-Menjouet,et al. Adding self-renewal in committed erythroid progenitors improves the biological relevance of a mathematical model of erythropoiesis. , 2008, Journal of theoretical biology.
[11] Wolfgang Wagner,et al. Modeling of replicative senescence in hematopoietic development , 2009, Aging.
[12] Alan S Perelson,et al. Quantifying T lymphocyte turnover. , 2013, Journal of theoretical biology.
[13] Allon M. Klein,et al. Clonal dynamics of native haematopoiesis , 2014, Nature.
[14] L. Harker,et al. Neutrophil kinetics in man. , 1976, The Journal of clinical investigation.
[15] Elisa Laurenti,et al. Hematopoiesis: a human perspective. , 2012, Cell stem cell.
[16] T. Höfer,et al. Output without input: the lifelong productivity of hematopoietic stem cells. , 2016, Current opinion in cell biology.
[17] J. Borghans,et al. In vivo labeling with 2H2O reveals a human neutrophil lifespan of 5.4 days. , 2010, Blood.
[18] Nathalie Rufer,et al. Telomere Fluorescence Measurements in Granulocytes and T Lymphocyte Subsets Point to a High Turnover of Hematopoietic Stem Cells and Memory T Cells in Early Childhood , 1999, The Journal of experimental medicine.
[19] M. Cooper,et al. Clonal stability of blood cell lineages indicated by X-chromosomal transcriptional polymorphism , 1996, The Journal of experimental medicine.
[20] P Guttorp,et al. Behavior of hematopoietic stem cells in a large animal. , 1995, Proceedings of the National Academy of Sciences of the United States of America.
[21] A. Marciniak-Czochra,et al. The impact of CD34+ cell dose on engraftment after SCTs: personalized estimates based on mathematical modeling , 2014, Bone Marrow Transplantation.
[22] P. Guttorp,et al. The replication rate of human hematopoietic stem cells in vivo. , 2011, Blood.
[23] H. Sieburg,et al. Deterministic regulation of hematopoietic stem cell self-renewal and differentiation. , 2002, Blood.
[24] C. Eaves,et al. Hematopoietic stem cell heterogeneity takes center stage. , 2012, Cell stem cell.
[25] Zheng Sun,et al. Analysis of stochastic stem cell models with control. , 2015, Mathematical biosciences.
[26] L Edelstein-Keshet,et al. Modelling perspectives on aging: can mathematics help us stay young? , 2001, Journal of theoretical biology.
[27] Chris D. Greenman,et al. A Hierarchical Kinetic Theory of Birth, Death and Fission in Age-Structured Interacting Populations , 2016, Journal of statistical physics.
[28] T. Höfer,et al. Fate Mapping and Quantitation of Hematopoiesis In Vivo. , 2016, Annual review of immunology.
[29] B. Brandsdal,et al. Stem cell regulation: Implications when differentiated cells regulate symmetric stem cell division. , 2015, Journal of theoretical biology.
[30] Andreas Trumpp,et al. Hematopoietic Stem Cells Reversibly Switch from Dormancy to Self-Renewal during Homeostasis and Repair , 2008, Cell.
[31] Zheng Sun,et al. Stochastic modeling of stem-cell dynamics with control. , 2012, Mathematical biosciences.
[32] D. Kendall. On the Generalized "Birth-and-Death" Process , 1948 .
[33] Marc Mangel,et al. Stochastic Dynamics of Interacting Haematopoietic Stem Cell Niche Lineages , 2014, PLoS Comput. Biol..
[34] L. Allen. An introduction to stochastic processes with applications to biology , 2003 .
[35] R. Hodes. Telomere Length, Aging, and Somatic Cell Turnover , 1999, The Journal of experimental medicine.
[36] Chuanfeng Wu,et al. The impact of aging on primate hematopoiesis as interrogated by clonal tracking. , 2018, Blood.
[37] K. Vahala. Handbook of stochastic methods for physics, chemistry and the natural sciences , 1986, IEEE Journal of Quantum Electronics.
[38] J. Dick,et al. Individual stem cells with highly variable proliferation and self-renewal properties comprise the human hematopoietic stem cell compartment , 2006, Nature Immunology.
[39] Willi Jäger,et al. Modeling of asymmetric cell division in hematopoietic stem cells--regulation of self-renewal is essential for efficient repopulation. , 2009, Stem cells and development.
[40] Khachik Sargsyan,et al. Extinction Times for Birth-Death Processes: Exact Results, Continuum Asymptotics, and the Failure of the Fokker-Planck Approximation , 2004, Multiscale Model. Simul..
[41] P. Frenette,et al. Hematopoietic stem cell niche maintenance during homeostasis and regeneration , 2014, Nature Medicine.
[42] Tom Chou,et al. Kinetic theory of age-structured stochastic birth-death processes. , 2015, Physical review. E.
[43] H. Sieburg,et al. Stem cell heterogeneity: implications for aging and regenerative medicine. , 2012, Blood.
[44] Jun Seita,et al. Hematopoietic stem cell: self‐renewal versus differentiation , 2010, Wiley interdisciplinary reviews. Systems biology and medicine.
[45] F. Geissmann,et al. Blood monocytes: development, heterogeneity, and relationship with dendritic cells. , 2009, Annual review of immunology.
[46] J. Keller,et al. Local clonal analysis of the hematopoietic system shows that multiple small short-living clones maintain life-long hematopoiesis in reconstituted mice. , 1996, Blood.
[47] I. Lemischka,et al. Clonal and systemic analysis of long-term hematopoiesis in the mouse. , 1990, Genes & development.
[48] Peter Guttorp,et al. Evidence that hematopoiesis may be a stochastic process in vivo , 1996, Nature Medicine.
[49] R. Miller. Telomere diminution as a cause of immune failure in old age: an unfashionable demurral. , 2000, Biochemical Society transactions.
[50] C. Quince,et al. Absorption and fixation times for neutral and quasi-neutral populations with density dependence. , 2008, Theoretical population biology.
[51] J. Borghans,et al. In vivo labeling with 2H2O reveals a human neutrophil lifespan of 5.4 days. , 2010, Blood.
[52] Jinzhi Lei,et al. Neutrophil dynamics in response to chemotherapy and G-CSF. , 2012, Journal of theoretical biology.
[53] C. Peterson,et al. Dynamical modelling of haematopoiesis: an integrated view over the system in homeostasis and under perturbation , 2013, Journal of The Royal Society Interface.
[54] L. Bystrykh,et al. Heterogeneity of young and aged murine hematopoietic stem cells revealed by quantitative clonal analysis using cellular barcoding. , 2013, Blood.
[55] Younan Chen,et al. Reference values of clinical chemistry and hematology parameters in rhesus monkeys (Macaca mulatta) , 2009, Xenotransplantation.
[56] A. Presson,et al. Dynamics of HSPC repopulation in nonhuman primates revealed by a decade-long clonal-tracking study. , 2014, Cell stem cell.
[57] M. Block,et al. Human neutrophil kinetics: modeling of stable isotope labeling data supports short blood neutrophil half-lives. , 2016, Blood.
[58] Tim Holland-Letz,et al. Fundamental properties of unperturbed haematopoiesis from stem cells in vivo , 2015, Nature.
[59] T. Chou,et al. Mechanisms of blood homeostasis: lineage tracking and a neutral model of cell populations in rhesus macaques , 2015, bioRxiv.