Estimating selection pressures from limited comparative data.
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[1] M. Archetti. Genetic robustness and selection at the protein level for synonymous codons , 2006, Journal of evolutionary biology.
[2] L. Hurst,et al. Hearing silence: non-neutral evolution at synonymous sites in mammals , 2006, Nature Reviews Genetics.
[3] Andreas Prlic,et al. Ensembl 2006 , 2005, Nucleic Acids Res..
[4] Joshua B. Plotkin,et al. Codon Usage and Selection on Proteins , 2006, Journal of Molecular Evolution.
[5] J. Hermisson,et al. A dissection of volatility in yeast. , 2005, Molecular biology and evolution.
[6] P. Sharp,et al. Gene "volatility" is most unlikely to reveal adaptation. , 2005, Molecular biology and evolution.
[7] A. Hughes,et al. Codon volatility as an indicator of positive selection: data from eukaryotic genome comparisons. , 2005, Molecular biology and evolution.
[8] Dan Graur,et al. The comparative method rules! Codon volatility cannot detect positive Darwinian selection using a single genome sequence. , 2005, Molecular biology and evolution.
[9] J. J. Emerson,et al. Evolutionary genomics: Codon volatility does not detect selection , 2005, Nature.
[10] J. Dushoff,et al. Evolutionary genomics: Codon volatility does not detect selection (reply) , 2005, Nature.
[11] Andrew D. Kern,et al. Evolutionary genomics: Codon bias and selection on single genomes , 2005, Nature.
[12] Jianzhi Zhang,et al. On the Evolution of Codon Volatility , 2005, Genetics.
[13] A. E. Hirsh,et al. Adjusting for selection on synonymous sites in estimates of evolutionary distance. , 2005, Molecular biology and evolution.
[14] G. B. Golding,et al. Expected frequencies of codon use as a function of mutation rates and codon fitnesses , 2005, Journal of Molecular Evolution.
[15] Joshua B. Plotkin,et al. Detecting selection using a single genome sequence of M. tuberculosis and P. falciparum , 2004, Nature.
[16] R. Nichols,et al. Application of DNA microarrays to study the evolutionary genomics of Yersinia pestis and Yersinia pseudotuberculosis. , 2003, Genome research.
[17] D. P. Wall,et al. Detecting putative orthologs , 2003, Bioinform..
[18] B. Birren,et al. Sequencing and comparison of yeast species to identify genes and regulatory elements , 2003, Nature.
[19] Jonathan Dushoff,et al. Codon bias and frequency-dependent selection on the hemagglutinin epitopes of influenza A virus , 2003, Proceedings of the National Academy of Sciences of the United States of America.
[20] Z. Yang,et al. Estimating synonymous and nonsynonymous substitution rates under realistic evolutionary models. , 2000, Molecular biology and evolution.
[21] H. Akashi,et al. Translational selection and molecular evolution. , 1998, Current opinion in genetics & development.
[22] Ziheng Yang,et al. PAML: a program package for phylogenetic analysis by maximum likelihood , 1997, Comput. Appl. Biosci..
[23] E. Fikrig,et al. Borrelia burgdorferi P35 and P37 proteins, expressed in vivo, elicit protective immunity. , 1997, Immunity.
[24] N. Goldman,et al. A codon-based model of nucleotide substitution for protein-coding DNA sequences. , 1994, Molecular biology and evolution.
[25] Wen-Hsiung Li,et al. The rate of synonymous substitution in enterobacterial genes is inversely related to codon usage bias. , 1987, Molecular biology and evolution.
[26] J. J. Emerson,et al. Codon bias and selection on single genomes , 2022 .