Isolation and proteomic analysis of the SYP61 compartment reveal its role in exocytic trafficking in Arabidopsis

[1]  M. Bennett,et al.  Conserved Arabidopsis ECHIDNA protein mediates trans–Golgi-network trafficking and cell elongation , 2011, Proceedings of the National Academy of Sciences.

[2]  D. Mastronarde,et al.  Electron Tomography of RabA4b‐ and PI‐4Kβ1‐Labeled Trans Golgi Network Compartments in Arabidopsis , 2011, Traffic.

[3]  A. Millar,et al.  Analysis of the Arabidopsis cytosolic proteome highlights subcellular partitioning of central plant metabolism. , 2011, Journal of proteome research.

[4]  O. Krakovska,et al.  Identification of Novel Molecular Targets for Endometrial Cancer Using a Drill-Down LC-MS/MS Approach with iTRAQ , 2011, PloS one.

[5]  N. Raikhel,et al.  Advances in dissecting endomembrane trafficking with small molecules. , 2010, Current opinion in plant biology.

[6]  C. Hawes,et al.  A Recycling-Defective Vacuolar Sorting Receptor Reveals an Intermediate Compartment Situated between Prevacuoles and Vacuoles in Tobacco[W] , 2010, Plant Cell.

[7]  B. Gerrits,et al.  Molecular characterization of a trafficking organelle: Dissecting the axonal paths of calsyntenin‐1 transport vesicles , 2010, Proteomics.

[8]  A. Muñoz,et al.  Functional specialization within the vacuolar sorting receptor family: VSR1, VSR3 and VSR4 sort vacuolar storage cargo in seeds and vegetative tissues. , 2010, The Plant journal : for cell and molecular biology.

[9]  M. Thellmann,et al.  Tethering Factors Required for Cytokinesis in Arabidopsis1[W] , 2010, Plant Physiology.

[10]  B. Saint-Jean,et al.  The Cytosolic Tail Dipeptide Ile-Met of the Pea Receptor BP80 Is Required for Recycling from the Prevacuole and for Endocytosis[W] , 2010, Plant Cell.

[11]  G. Jürgens,et al.  Endocytic and Secretory Traffic in Arabidopsis Merge in the Trans-Golgi Network/Early Endosome, an Independent and Highly Dynamic Organelle[W] , 2010, Plant Cell.

[12]  C. Biskup,et al.  Combined Bimolecular Fluorescence Complementation and Förster Resonance Energy Transfer Reveals Ternary SNARE Complex Formation in Living Plant Cells1[W][OA] , 2010, Plant Physiology.

[13]  P. Pimpl,et al.  Retromer recycles vacuolar sorting receptors from the trans-Golgi network. , 2010, The Plant journal : for cell and molecular biology.

[14]  Niloufer G Irani,et al.  Receptor endocytosis and signaling in plants. , 2009, Current opinion in plant biology.

[15]  J. Chory,et al.  Genetic evidence that the higher plant Rab-D1 and Rab-D2 GTPases exhibit distinct but overlapping interactions in the early secretory pathway , 2009, Journal of Cell Science.

[16]  Michael Gribskov,et al.  Protein-Protein Interactions of Tandem Affinity Purified Protein Kinases from Rice , 2009, PloS one.

[17]  G. Jürgens,et al.  Post‐Golgi Traffic in Plants , 2009, Traffic.

[18]  J. Chory,et al.  Rapid, combinatorial analysis of membrane compartments in intact plants with a multicolor marker set. , 2009, The Plant journal : for cell and molecular biology.

[19]  F. Kano,et al.  Yip1A regulates the COPI-independent retrograde transport from the Golgi complex to the ER , 2009, Journal of Cell Science.

[20]  D. Ehrhardt,et al.  Arabidopsis cortical microtubules position cellulose synthase delivery to the plasma membrane and interact with cellulose synthase trafficking compartments , 2009, Nature Cell Biology.

[21]  K. Schumacher,et al.  Pausing of Golgi Bodies on Microtubules Regulates Secretion of Cellulose Synthase Complexes in Arabidopsis[W] , 2009, The Plant Cell Online.

[22]  K. Matsuoka,et al.  A Mobile Secretory Vesicle Cluster Involved in Mass Transport from the Golgi to the Plant Cell Exterior[W][OA] , 2009, The Plant Cell Online.

[23]  A. Millar,et al.  Novel Proteins, Putative Membrane Transporters, and an Integrated Metabolic Network Are Revealed by Quantitative Proteomic Analysis of Arabidopsis Cell Culture Peroxisomes1[W][OA] , 2008, Plant Physiology.

[24]  N. Raikhel,et al.  Arabidopsis XXT5 gene encodes a putative alpha-1,6-xylosyltransferase that is involved in xyloglucan biosynthesis. , 2008, The Plant journal : for cell and molecular biology.

[25]  K. Schumacher,et al.  The Endosomal System of Plants: Charting New and Familiar Territories1 , 2008, Plant Physiology.

[26]  N. Geldner,et al.  Plant Receptors Go Endosomal: A Moving View on Signal Transduction[W] , 2008, Plant Physiology.

[27]  Zhenbiao Yang,et al.  Endosidin1 defines a compartment involved in endocytosis of the brassinosteroid receptor BRI1 and the auxin transporters PIN2 and AUX1 , 2008, Proceedings of the National Academy of Sciences.

[28]  R. Williamson,et al.  Features of the primary wall CESA complex in wild type and cellulose-deficient mutants of Arabidopsis thaliana , 2008, Journal of experimental botany.

[29]  T. Girke,et al.  Expression analysis of Arabidopsis vacuolar sorting receptor 3 reveals a putative function in guard cells. , 2008, Journal of experimental botany.

[30]  G. Jürgens,et al.  Co-option of a default secretory pathway for plant immune responses , 2008, Nature.

[31]  N. Raikhel,et al.  The shoot meristem identity gene TFL1 is involved in flower development and trafficking to the protein storage vacuole , 2007, Proceedings of the National Academy of Sciences.

[32]  D. Robinson,et al.  Localization of Vacuolar Transport Receptors and Cargo Proteins in the Golgi Apparatus of Developing Arabidopsis Embryos , 2007, Traffic.

[33]  B. Vanhaesebroeck,et al.  Quantitative Profile of Five Murine Core Proteomes Using Label-free Functional Proteomics*S , 2007, Molecular & Cellular Proteomics.

[34]  C. Ungermann,et al.  Rab cascades and tethering factors in the endomembrane system , 2007, FEBS letters.

[35]  D. Robinson,et al.  Protein Mobilization in Germinating Mung Bean Seeds Involves Vacuolar Sorting Receptors and Multivesicular Bodies1[W][OA] , 2007, Plant Physiology.

[36]  Y. Noda,et al.  Tvp38, Tvp23, Tvp18 and Tvp15: novel membrane proteins in the Tlg2-containing Golgi/endosome compartments of Saccharomyces cerevisiae. , 2007, Experimental cell research.

[37]  G. An,et al.  Rice SCAMP1 Defines Clathrin-Coated, trans-Golgi–Located Tubular-Vesicular Structures as an Early Endosome in Tobacco BY-2 Cells[W][OA] , 2007, The Plant Cell Online.

[38]  A. Millar,et al.  Isolation and subfractionation of plant mitochondria for proteomic analysis. , 2007, Methods in molecular biology.

[39]  N. Raikhel,et al.  Arabidopsis Reversibly Glycosylated Polypeptides 1 and 2 Are Essential for Pollen Development1[W] , 2006, Plant Physiology.

[40]  R. Jung,et al.  The Proteolytic Processing of Seed Storage Proteins in Arabidopsis Embryo Cells Starts in the Multivesicular Bodies[W] , 2006, The Plant Cell Online.

[41]  I. Hwang,et al.  Localization of Green Fluorescent Protein Fusions with the Seven Arabidopsis Vacuolar Sorting Receptors to Prevacuolar Compartments in Tobacco BY-2 Cells1[W][OA] , 2006, Plant Physiology.

[42]  D. Ehrhardt,et al.  Visualization of Cellulose Synthase Demonstrates Functional Association with Microtubules , 2006, Science.

[43]  Rod B. Watson,et al.  Mapping the Arabidopsis organelle proteome. , 2006, Proceedings of the National Academy of Sciences of the United States of America.

[44]  E. Sztul,et al.  Role of tethering factors in secretory membrane traffic. , 2006, American journal of physiology. Cell physiology.

[45]  Y. Shin,et al.  YKT6 is a core constituent of membrane fusion machineries at the Arabidopsis trans-Golgi network. , 2005, Journal of molecular biology.

[46]  D. B. Weatherly,et al.  A Heuristic Method for Assigning a False-discovery Rate for Protein Identifications from Mascot Database Search Results * , 2005, Molecular & Cellular Proteomics.

[47]  M. Gorenstein,et al.  Quantitative proteomic analysis by accurate mass retention time pairs. , 2005, Analytical chemistry.

[48]  Thomas Girke,et al.  The Vegetative Vacuole Proteome of Arabidopsis thaliana Reveals Predicted and Unexpected Proteinsw⃞ , 2004, The Plant Cell Online.

[49]  K. Sjölander,et al.  The Arabidopsis thaliana Chloroplast Proteome Reveals Pathway Abundance and Novel Protein Functions , 2004, Current Biology.

[50]  D. Robinson,et al.  Identification of Multivesicular Bodies as Prevacuolar Compartments in Nicotiana tabacum BY-2 Cells Online version contains Web-only data. , 2004, The Plant Cell Online.

[51]  M. Nishimura,et al.  Vacuolar sorting receptor for seed storage proteins in Arabidopsis thaliana , 2003, Proceedings of the National Academy of Sciences of the United States of America.

[52]  Erich Kombrink,et al.  SNARE-protein-mediated disease resistance at the plant cell wall , 2003, Nature.

[53]  N. Raikhel,et al.  The AtC-VPS protein complex is localized to the tonoplast and the prevacuolar compartment in arabidopsis. , 2003, Molecular biology of the cell.

[54]  Jianhua Zhu,et al.  OSM1/SYP61: A Syntaxin Protein in Arabidopsis Controls Abscisic Acid–Mediated and Non-Abscisic Acid–Mediated Responses to Abiotic Stress , 2002, The Plant Cell Online.

[55]  N. Raikhel,et al.  Interactions between syntaxins identify at least five SNARE complexes within the Golgi/prevacuolar system of the Arabidopsis cell. , 2001, Molecular biology of the cell.

[56]  H. Horstmann,et al.  A Membrane Protein Enriched in Endoplasmic Reticulum Exit Sites Interacts with COPII* , 2001, The Journal of Biological Chemistry.

[57]  G. Jürgens,et al.  Functional characterization of the KNOLLE-interacting t-SNARE AtSNAP33 and its role in plant cytokinesis , 2001, The Journal of cell biology.

[58]  M. Sacher,et al.  Trapp Stimulates Guanine Nucleotide Exchange on Ypt1p , 2000, The Journal of cell biology.

[59]  N. Raikhel,et al.  AtVPS45 complex formation at the trans-Golgi network. , 2000, Molecular biology of the cell.

[60]  M. Blatt,et al.  A tobacco syntaxin with a role in hormonal control of guard cell ion channels. , 1999, Science.

[61]  A. Brunger,et al.  Conserved structural features of the synaptic fusion complex: SNARE proteins reclassified as Q- and R-SNAREs. , 1998, Proceedings of the National Academy of Sciences of the United States of America.

[62]  S. Clough,et al.  Floral dip: a simplified method for Agrobacterium-mediated transformation of Arabidopsis thaliana. , 1998, The Plant journal : for cell and molecular biology.

[63]  D. Gallwitz,et al.  Specific binding to a novel and essential Golgi membrane protein (Yip1p) functionally links the transport GTPases Ypt1p and Ypt31p , 1998, The EMBO journal.

[64]  S. Ahmed,et al.  Cloning and Subcellular Location of an Arabidopsis Receptor-Like Protein That Shares Common Features with Protein-Sorting Receptors of Eukaryotic Cells , 1997, Plant physiology.

[65]  N. Raikhel,et al.  The syntaxin homolog AtPEP12p resides on a late post-Golgi compartment in plants. , 1997, The Plant cell.

[66]  R. Kaufman,et al.  Immunoglobulin Binding Protein (BiP) Function Is Required to Protect Cells from Endoplasmic Reticulum Stress but Is Not Required for the Secretion of Selective Proteins* , 1997, The Journal of Biological Chemistry.

[67]  J. Rothman,et al.  SNAP family of NSF attachment proteins includes a brain-specific isoform , 1993, Nature.

[68]  H. Padgett,et al.  Proaleurain vacuolar targeting is mediated by short contiguous peptide interactions. , 1992, The Plant cell.

[69]  N. Raikhel,et al.  A carboxyl-terminal propeptide is necessary for proper sorting of barley lectin to vacuoles of tobacco. , 1990, The Plant cell.