Universal rules and idiosyncratic features in tRNA identity.
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R Giegé | C. Florentz | R. Giegé | M. Sissler | C Florentz | M Sissler
[1] U. RajBhandary,et al. Mutants of Escherichia coli initiator tRNA that suppress amber codons in Saccharomyces cerevisiae and are aminoacylated with tyrosine by yeast extracts. , 1991, Proceedings of the National Academy of Sciences of the United States of America.
[2] P. Schimmel,et al. Cell growth inhibition by sequence‐specific RNA minihelices. , 1995, The EMBO journal.
[3] Y. Hou,et al. An RNA structural determinant for tRNA recognition. , 1997, Biochemistry.
[4] D. Moras,et al. Class II aminoacyl transfer RNA synthetases: crystal structure of yeast aspartyl-tRNA synthetase complexed with tRNA(Asp) , 1991, Science.
[5] T. Noda,et al. Human glycyl-tRNA synthetase. Wide divergence of primary structure from bacterial counterpart and species-specific aminoacylation. , 1994, The Journal of biological chemistry.
[6] L. Pallanck,et al. Conversion of a methionine initiator tRNA into a tryptophan-inserting elongator tRNA in vivo. , 1992, Biochemistry.
[7] J. Sampson,et al. Variant minihelix RNAs reveal sequence‐specific recognition of the helical tRNA(Ser) acceptor stem by E.coli seryl‐tRNA synthetase. , 1996, The EMBO journal.
[8] M. Yarus. tRNA identity: A hair of the dogma that bit us , 1988, Cell.
[9] H. Gross,et al. The discriminator bases G73 in human tRNA(Ser) and A73 in tRNA(Leu) have significantly different roles in the recognition of aminoacyl-tRNA synthetases. , 1996, Nucleic acids research.
[10] H. Himeno,et al. Identity determinants of E. coli tRNA(Val). , 1991, Biochemical and biophysical research communications.
[11] D. Moras,et al. Yeast tRNAAsp recognition by its cognate class II aminoacyl-tRNA synthetase , 1993, Nature.
[12] K. Watanabe,et al. Recognition nucleotides of Escherichia coli tRNA(Leu) and its elements facilitating discrimination from tRNASer and tRNA(Tyr). , 1993, Journal of molecular biology.
[13] Study of the interaction of yeast arginyl-tRNA synthetase with yeast tRNAArg2 and tRNAArg3 by partial digestions with cobra venom ribonuclease. , 1983, European journal of biochemistry.
[14] P. Lengyel. Problems in Protein Biosynthesis , 1966, The Journal of general physiology.
[15] P. Schultz,et al. Engineering a tRNA and aminoacyl-tRNA synthetase for the site-specific incorporation of unnatural amino acids into proteins in vivo. , 1997, Proceedings of the National Academy of Sciences of the United States of America.
[16] R. Cedergren,et al. Amber suppression in Escherichia coli by unusual mitochondria-like transfer RNAs. , 1998, Proceedings of the National Academy of Sciences of the United States of America.
[17] S. Martinis,et al. Microhelix aminoacylation by a class I tRNA synthetase. Non-conserved base pairs required for specificity. , 1993, The Journal of biological chemistry.
[18] W. McClain,et al. Rapid determination of nucleotides that define tRNA(Gly) acceptor identity. , 1991, Proceedings of the National Academy of Sciences of the United States of America.
[19] C. Florentz,et al. Arginine aminoacylation identity is context‐dependent and ensured by alternate recognition sets in the anticodon loop of accepting tRNA transcripts. , 1996, The EMBO journal.
[20] D. Crothers,et al. Is there a discriminator site in transfer RNA? , 1972, Proceedings of the National Academy of Sciences of the United States of America.
[21] P. Schimmel,et al. Specific atomic groups and RNA helix geometry in acceptor stem recognition by a tRNA synthetase. , 1997, Proceedings of the National Academy of Sciences of the United States of America.
[22] J. Abelson,et al. Eight base changes are sufficient to convert a leucine-inserting tRNA into a serine-inserting tRNA. , 1992, Proceedings of the National Academy of Sciences of the United States of America.
[23] P. Schimmel,et al. Operational RNA code for amino acids: species-specific aminoacylation of minihelices switched by a single nucleotide. , 1995, Proceedings of the National Academy of Sciences of the United States of America.
[24] Christian de Duve,et al. The second genetic code , 1988, Nature.
[25] D. Söll,et al. Anticodon and acceptor stem nucleotides in tRNAGln are major recognition elements for E. coli glutaminyl-tRNA synthetase , 1991, Nature.
[26] Y. Mechulam,et al. Two acidic residues of Escherichia coli methionyl-tRNA synthetase act as negative discriminants towards the binding of non-cognate tRNA anticodons. , 1993, Journal of molecular biology.
[27] J. Ebel,et al. Incorrect aminoacylatins catalysed by the phenylalanyl-and valyl-tRNA synthetases from yeast. , 1972, European journal of biochemistry.
[28] The RNA sequence context defines the mechanistic routes by which yeast arginyl-tRNA synthetase charges tRNA. , 1998, RNA.
[29] S. Cusack,et al. Sequence, structural and evolutionary relationships between class 2 aminoacyl-tRNA synthetases , 1991, Nucleic Acids Res..
[30] W. Chu,et al. Recognition of Escherichia coli valine transfer RNA by its cognate synthetase: a fluorine-19 NMR study. , 1991, Biochemistry.
[31] C. Francklyn,et al. Enzymatic aminoacylation of an eight-base-pair microhelix with histidine. , 1990, Proceedings of the National Academy of Sciences of the United States of America.
[32] P. Schimmel,et al. Subtle atomic group discrimination in the RNA minor groove. , 1997, Proceedings of the National Academy of Sciences of the United States of America.
[33] W. McClain,et al. Nucleotides that contribute to the identity of Escherichia coli tRNA(Phe). , 1988, Journal of molecular biology.
[34] T. Dreher,et al. Mutant viral RNAs synthesized in vitro show altered aminoacylation and replicase template activities , 1984, Nature.
[35] K. Musier-Forsyth,et al. Escherichia coli proline tRNA synthetase is sensitive to changes in the core region of tRNA(Pro). , 1994, Biochemistry.
[36] W. McClain,et al. Distinctive acceptor-end structure and other determinants of Escherichia coli tRNAPro identity. , 1994, Nucleic acids research.
[37] C Massire,et al. DRAWNA: a program for drawing schematic views of nucleic acids. , 1994, Journal of molecular graphics.
[38] M. Mirande,et al. Functional replacement of hamster lysyl-tRNA synthetase by the yeast enzyme requires cognate amino acid sequences for proper tRNA recognition. , 1996, Biochemistry.
[39] K. Musier-Forsyth,et al. Single Atomic Group in RNA Helix Needed for Positive and Negative tRNA Synthetase Discrimination , 1996 .
[40] Olivier Poch,et al. Partition of tRNA synthetases into two classes based on mutually exclusive sets of sequence motifs , 1990, Nature.
[41] H. Himeno,et al. Identity determinants of E. coli tryptophan tRNA. , 1991, Nucleic acids research.
[42] G. Komatsoulis,et al. Recognition of tRNA(Cys) by Escherichia coli cysteinyl-tRNA synthetase. , 1993, Biochemistry.
[43] P. Schimmel,et al. Equilibrium measurements of cognate and noncognate interactions between aminoacyl transfer RNA synthetases and transfer RNA. , 1975, Biochemistry.
[44] C. Francklyn,et al. Cytosine 73 is a discriminator nucleotide in vivo for histidyl-tRNA in Escherichia coli. , 1994, The Journal of biological chemistry.
[45] W. McClain,et al. Rules that govern tRNA identity in protein synthesis. , 1993, Journal of molecular biology.
[46] P. Bhargava,et al. Aminoacyl-transfer RNA synthetase recognition cod-words in yeast transfer RNA's: a proposal. , 1970, Journal of theoretical biology.
[47] O. Uhlenbeck,et al. Recognition nucleotides for human phenylalanyl-tRNA synthetase. , 1992, Nucleic acids research.
[48] G. Varani,et al. Structure of the acceptor stem of Escherichia coli tRNA Ala: role of the G3.U70 base pair in synthetase recognition. , 1997, Nucleic acids research.
[49] H. Zachau. Transfer ribonucleic acids. , 1969, Angewandte Chemie.
[50] D. Söll,et al. Aminoacyl-tRNA synthetase-induced cleavage of tRNA. , 1992, Nucleic acids research.
[51] P. Schimmel,et al. Transfer RNA: From minihelix to genetic code , 1995, Cell.
[52] S. Cusack,et al. The crystal structures of T. thermophilus lysyl‐tRNA synthetase complexed with E. coli tRNA(Lys) and a T. thermophilus tRNA(Lys) transcript: anticodon recognition and conformational changes upon binding of a lysyl‐adenylate analogue. , 1996, The EMBO journal.
[53] Y. Mechulam,et al. Critical role of the acceptor stem of tRNAs(Met) in their aminoacylation by Escherichia coli methionyl-tRNA synthetase. , 1993, Journal of molecular biology.
[54] C. Hilbers,et al. Structure and Dynamics of RNA , 1986, NATO ASI Series.
[55] H. Himeno,et al. Identity elements of Escherichia coli tRNAAla , 1991, Journal of molecular recognition : JMR.
[56] Richard Giegé,et al. Relaxation of a transfer RNA specificity by removal of modified nucleotides , 1990, Nature.
[57] S. Martinis,et al. RNA tetraloops as minimalist substrates for aminoacylation. , 1992, Biochemistry.
[58] M Ikeguchi,et al. The use of sequence comparison to detect 'identities' in tRNA genes. , 1998, Nucleic acids research.
[59] H. Himeno,et al. Escherichia coli seryl-tRNA synthetase recognizes tRNA(Ser) by its characteristic tertiary structure. , 1994, Journal of molecular biology.
[60] M. Pinck,et al. Enzymatic Binding of Valine to the 3′ End of TYMV-RNA , 1970, Nature.
[61] W. McClain,et al. Changing the identity of a tRNA by introducing a G-U wobble pair near the 3' acceptor end. , 1988, Science.
[62] P. Schimmel,et al. Evidence that a major determinant for the identity of a transfer RNA is conserved in evolution. , 1989, Biochemistry.
[63] O. Uhlenbeck,et al. Selection for active E. coli tRNA(Phe) variants from a randomized library using two proteins. , 1993, The EMBO journal.
[64] S. Commans,et al. Solution structure of the anticodon-binding domain of Escherichia coli lysyl-tRNA synthetase and studies of its interaction with tRNA(Lys). , 1995, Journal of molecular biology.
[65] R. Giegé,et al. Structure and aminoacylation capacities of tRNA transcripts containing deoxyribonucleotides. , 1997, RNA.
[66] H. Himeno,et al. Identity elements of Saccharomyces cerevisiae tRNA(His). , 1995, Nucleic Acids Research.
[67] N. Nameki. Identity elements of tRNA(Thr) towards Saccharomyces cerevisiae threonyl-tRNA synthetase. , 1995, Nucleic acids research.
[68] D. Söll,et al. Aminoacyl-tRNA synthesis: divergent routes to a common goal. , 1997, Trends in biochemical sciences.
[69] U. RajBhandary,et al. Saccharomyces cerevisiae cytoplasmic tyrosyl-tRNA synthetase gene. Isolation by complementation of a mutant Escherichia coli suppressor tRNA defective in aminoacylation and sequence analysis. , 1993, The Journal of biological chemistry.
[70] M. Yarus. Intrinsic precision of aminoacyl-tRNA synthesis enhanced through parallel systems of ligands. , 1972, Nature: New biology.
[71] C. Francklyn,et al. A nucleotide that enhances the charging of RNA minihelix sequence variants with alanine. , 1990, Biochemistry.
[72] O. Uhlenbeck,et al. Structure of an unmodified tRNA molecule. , 1989, Biochemistry.
[73] B. Felden,et al. Sequences Outside Recognition Sets Are Not Neutral for tRNA Aminoacylation , 1998, The Journal of Biological Chemistry.
[74] W. McClain,et al. Association of transfer RNA acceptor identity with a helical irregularity. , 1988, Science.
[75] Hongjian Liu,et al. Molecular recognition of tRNA(Pro) by Escherichia coli proline tRNA synthetase in vitro , 1995, Nucleic Acids Res..
[76] J R Sampson,et al. The transfer RNA identity problem: a search for rules. , 1994, Science.
[77] A. Böck,et al. The length of the aminoacyl-acceptor stem of the selenocysteine-specific tRNA(Sec) of Escherichia coli is the determinant for binding to elongation factors SELB or Tu. , 1991, The Journal of biological chemistry.
[78] H. Gross,et al. Identity determinants of human tRNA(Ser): sequence elements necessary for serylation and maturation of a tRNA with a long extra arm. , 1993, The EMBO journal.
[79] Paul Schimmel,et al. Aminoacylation of RNA minihelices with alanine , 1989, Nature.
[80] G. Eriani,et al. Mirror image alternative interaction patterns of the same tRNA with either class I arginyl-tRNA synthetase or class II aspartyl-tRNA synthetase. , 1997, Nucleic acids research.
[81] M. Mirande. Aminoacyl-tRNA synthetase family from prokaryotes and eukaryotes: structural domains and their implications. , 1991, Progress in nucleic acid research and molecular biology.
[82] L. Arnold,et al. NMR evidence for helix geometry modifications by a G‐U wobble base pair in the acceptor arm of E. coli tRNAAla , 1996, FEBS letters.
[83] M. Yarus. Recognition of nucleotide sequences. , 1969, Annual review of biochemistry.
[84] H. Bedouelle,et al. Macromolecular recognition through electrostatic repulsion. , 1995, The EMBO journal.
[85] B. Senger,et al. The anticodon triplet is not sufficient to confer methionine acceptance to a transfer RNA. , 1992, Proceedings of the National Academy of Sciences of the United States of America.
[86] C. Francklyn,et al. Overlapping nucleotide determinants for specific aminoacylation of RNA microhelices. , 1992, Science.
[87] L. H. Schulman,et al. Initiation of in vivo protein synthesis with non-methionine amino acids. , 1990, Biochemistry.
[88] R. Giegé,et al. Interplay of tRNA-like structures from plant viral RNAs with partners of the translation and replication machineries. , 1996, Proceedings of the National Academy of Sciences of the United States of America.
[89] J. Ebel,et al. Valylation of the two RNA components of turnip-yellow mosaic virus and specificity of the tRNA aminoacylation reaction. , 1978, European journal of biochemistry.
[90] P. Schimmel,et al. Modeling with in vitro kinetic parameters for the elaboration of transfer RNA identity in vivo. , 1989, Biochemistry.
[91] Henri Grosjean,et al. Modification And Editing Of Rna , 1998 .
[92] M. Kasha. Horizons in Biochemistry , 1962, The Yale Journal of Biology and Medicine.
[93] R. Giegé,et al. Footprinting evidence for close contacts of the yeast tRNA(Asp) anticodon region with aspartyl-tRNA synthetase. , 1992, Biochemical and biophysical research communications.
[94] T. Noda,et al. Human Lysyl-tRNA Synthetase Accepts Nucleotide 73 Variants and Rescues Escherichia coli Double-defective Mutant* , 1997, The Journal of Biological Chemistry.
[95] O. Nureki,et al. Molecular recognition of the identity-determinant set of isoleucine transfer RNA from Escherichia coli. , 1994, Journal of molecular biology.
[96] S. Martinis,et al. Enzymatic aminoacylation of sequence-specific RNA minihelices and hybrid duplexes with methionine. , 1992, Proceedings of the National Academy of Sciences of the United States of America.
[97] K. Ikeda,et al. The T-loop region of animal mitochondrial tRNA(Ser)(AGY) is a main recognition site for homologous seryl-tRNA synthetase. , 1992, Nucleic acids research.
[98] Richard Giegé,et al. Influence of tRNA tertiary structure and stability on aminoacylation by yeast aspartyl-tRNA synthetase , 1993, Nucleic Acids Res..
[99] J. Johnson,et al. Anticodon bases C34 and C35 are major, positive, identity elements in Saccharomyces cerevisiae tRNA(Trp). , 1993, Nucleic acids research.
[100] L. Pallanck,et al. The anticodon and discriminator base are major determinants of cysteine tRNA identity in vivo. , 1992, The Journal of biological chemistry.
[101] S. Cusack,et al. tRNA(Pro) anticodon recognition by Thermus thermophilus prolyl-tRNA synthetase. , 1998, Structure.
[102] W. McClain,et al. Specific function of a G.U wobble pair from an adjacent helical site in tRNA(Ala) during recognition by alanyl-tRNA synthetase. , 1996, RNA.
[103] U. RajBhandary,et al. Initiation of protein synthesis from a termination codon. , 1990, Proceedings of the National Academy of Sciences of the United States of America.
[104] S. Cusack. Eleven down and nine to go , 1995, Nature Structural Biology.
[105] J R Sampson,et al. Contributions of discrete tRNA(Ser) domains to aminoacylation by E.coli seryl-tRNA synthetase: a kinetic analysis using model RNA substrates. , 1993, Nucleic acids research.
[106] J. Lefèvre,et al. Conformational activation of aminoacyl-tRNA synthetases upon binding of tRNA. A facet of a multi-step adaptation process leading to the optimal biological activity. , 1982, European journal of biochemistry.
[107] T. Dafforn,et al. Comprehensive biological catalysis , 1998 .
[108] E. Westhof,et al. Transfer RNA identity rules and conformation of the tyrosine tRNA-like domain of BMV RNA imply additional charging by histidine and valine. , 1998, Biochemical and biophysical research communications.
[109] H. Gross,et al. Minimal tRNASer and tRNASec substrates for human seryl‐tRNA synthetase: contribution of tRNA domains to serylation and tertiary structure , 1998, FEBS letters.
[110] Identity elements of tRNA(Trp). Identification and evolutionary conservation. , 1993, The Journal of biological chemistry.
[111] Essential structures of a self-aminoacylating RNA. , 1997, Journal of molecular biology.
[112] F. Young. Biochemistry , 1955, The Indian Medical Gazette.
[113] Bonny Bryan,et al. Nucleic Acids Research Nucleic Acids Research , 2022 .
[114] H. Gross,et al. The exchange of the discriminator base A73 for G is alone sufficient to convert human tRNA(Leu) into a serine‐acceptor in vitro. , 1994, The EMBO journal.
[115] L. Kisselev. The role of the anticodon in recognition of tRNA by aminoacyl-tRNA synthetases. , 1985, Progress in nucleic acid research and molecular biology.
[116] R Giegé,et al. An operational RNA code for amino acids and possible relationship to genetic code. , 1993, Proceedings of the National Academy of Sciences of the United States of America.
[117] H. Gross,et al. Structural studies on tRNA acceptor stem microhelices: exchange of the discriminator base A73 for G in human tRNALeu switches the acceptor specificity from leucine to serine possibly by decreasing the stability of the terminal G1-C72 base pair. , 1997, Nucleic Acids Research.
[118] J. Puglisi,et al. Additive, cooperative and anti‐cooperative effects between identity nucleotides of a tRNA. , 1993, The EMBO journal.
[119] H. Himeno,et al. Identity determinants of E. coli threonine tRNA. , 1992, Biochemical and biophysical research communications.
[120] D. Söll,et al. Discrimination between glutaminyl-tRNA synthetase and seryl-tRNA synthetase involves nucleotides in the acceptor helix of tRNA. , 1988, Proceedings of the National Academy of Sciences of the United States of America.
[121] S Cusack,et al. The 2.9 A crystal structure of T. thermophilus seryl-tRNA synthetase complexed with tRNA(Ser). , 1994, Science.
[122] Paul Schimmel,et al. A simple structural feature is a major determinant of the identity of a transfer RNA , 1988, Nature.
[123] K. Watanabe,et al. Conversion of aminoacylation specificity from tRNA(Tyr) to tRNA(Ser) in vitro. , 1990, Nucleic acids research.
[124] K. Musier-Forsyth,et al. Transfer RNA aminoacylation: identification of a critical ribose 2'-hydroxyl-base interaction. , 1995, RNA.
[125] D. Söll,et al. When protein engineering confronts the tRNA world. , 1997, Proceedings of the National Academy of Sciences of the United States of America.
[126] L. H. Schulman,et al. Recognition of tRNAs by aminoacyl-tRNA synthetases. , 1991, Progress in nucleic acid research and molecular biology.
[127] S. Yoshida,et al. Only one nucleotide insertion to the long variable arm confers an efficient serine acceptor activity upon Saccharomyces cerevisiae tRNA(Leu) in vitro. , 1997, Journal of molecular biology.
[128] C. Ehresmann,et al. The expression of E.coli threonyl‐tRNA synthetase is regulated at the translational level by symmetrical operator‐repressor interactions. , 1996, The EMBO journal.
[129] J. F. Atkins,et al. Probing the structure of the Escherichia coli 10Sa RNA (tmRNA). , 1997, RNA.
[130] M. Grunberg‐Manago,et al. tRNA‐like structures and gene regulation at the translational level: a case of molecular mimicry in Escherichia coli. , 1989, The EMBO journal.
[131] H. Himeno,et al. The anticodon loop is a major identity determinant of Saccharomyces cerevisiae tRNA(Leu). , 1996, Journal of molecular biology.
[132] D. Söll,et al. E. coli initiator tRNA analogs with different nucleotides in the discriminator base position. , 1982, Nucleic acids research.
[133] W. McClain,et al. Changing the acceptor identity of a transfer RNA by altering nucleotides in a "variable pocket". , 1988, Science.
[134] B. Senger,et al. The presence of a D-stem but not a T-stem is essential for triggering aminoacylation upon anticodon binding in yeast methionine tRNA. , 1995, Journal of molecular biology.
[135] Yoshiyuki Kuchino,et al. Codon and amino-acid specificities of a transfer RNA are both converted by a single post-transcriptional modification , 1988, Nature.
[136] C. Florentz,et al. Determinant nucleotides of yeast tRNA(Asp) interact directly with aspartyl-tRNA synthetase. , 1992, Proceedings of the National Academy of Sciences of the United States of America.
[137] P. Schimmel,et al. Switching recognition of two tRNA synthetases with an amino acid swap in a designed peptide. , 1995, Science.
[138] P. Limbach,et al. Summary: the modified nucleosides of RNA. , 1994, Nucleic acids research.
[139] R. Chambers. On the recognition of tRNA by its aminoacyl-tRNA ligase. , 1971, Progress in nucleic acid research and molecular biology.
[140] C. Florentz,et al. Anticodon-independent aminoacylation of an RNA minihelix with valine. , 1992, Proceedings of the National Academy of Sciences of the United States of America.
[141] L. Pallanck,et al. Anticodon-dependent aminoacylation of a noncognate tRNA with isoleucine, valine, and phenylalanine in vivo. , 1991, Proceedings of the National Academy of Sciences of the United States of America.
[142] L. H. Schulman,et al. The anticodon and discriminator base are important for aminoacylation of Escherichia coli tRNA(Asn). , 1993, The Journal of biological chemistry.
[143] C. Pleij,et al. 3-D graphics modelling of the tRNA-like 3'-end of turnip yellow mosaic virus RNA: structural and functional implications. , 1987, Journal of biomolecular structure & dynamics.
[144] R. Giegé,et al. Solution conformation of several free tRNALeu species from bean, yeast and Escherichia coli and interaction of these tRNAs with bean cytoplasmic Leucyl-tRNA synthetase. A phosphate alkylation study with ethylnitrosourea. , 1990, Nucleic acids research.
[145] C. Florentz,et al. Histidylation by yeast HisRS of tRNA or tRNA-like structure relies on residues -1 and 73 but is dependent on the RNA context. , 1994, Nucleic acids research.
[146] E. Westhof,et al. Solution structure of the 3'-end of brome mosaic virus genomic RNAs. Conformational mimicry with canonical tRNAs. , 1994, Journal of molecular biology.
[147] Switching tRNA(Gln) identity from glutamine to tryptophan. , 1992, Proceedings of the National Academy of Sciences of the United States of America.
[148] E. Westhof,et al. Yeast tRNAAsp tertiary structure in solution and areas of interaction of the tRNA with aspartyl-tRNA synthetase. A comparative study of the yeast phenylalanine system by phosphate alkylation experiments with ethylnitrosourea. , 1985, Journal of molecular biology.
[149] Role of acceptor stem conformation in tRNAVal recognition by its cognate synthetase. , 1997, Nucleic acids research.
[150] J. A. Wahleithner,et al. Bizarre tRNAs inferred from DNA sequences of mitochondrial genomes of nematode worms. , 1987, Proceedings of the National Academy of Sciences of the United States of America.
[151] O. Lavrik,et al. Recognition of tRNAPhe by phenylalanyl-tRNA synthetase of Thermus thermophilus. , 1995, European journal of biochemistry.
[152] C. Carter,et al. Cognition, mechanism, and evolutionary relationships in aminoacyl-tRNA synthetases. , 1993, Annual review of biochemistry.
[153] U. RajBhandary,et al. Striking effects of coupling mutations in the acceptor stem on recognition of tRNAs by Escherichia coli Met-tRNA synthetase and Met-tRNA transformylase. , 1992, Proceedings of the National Academy of Sciences of the United States of America.
[154] O. Uhlenbeck,et al. Nucleotides in yeast tRNAPhe required for the specific recognition by its cognate synthetase. , 1989, Science.
[155] R. Green,et al. Specificity for aminoacylation of an RNA helix: an unpaired, exocyclic amino group in the minor groove. , 1991, Science.
[156] O. Uhlenbeck,et al. Determination of recognition nucleotides for Escherichia coli phenylalanyl-tRNA synthetase. , 1992, Biochemistry.
[157] H. Inokuchi,et al. A tRNA-like structure is present in 10Sa RNA, a small stable RNA from Escherichia coli. , 1994, Proceedings of the National Academy of Sciences of the United States of America.
[158] T. Steitz,et al. Structure of E. coli glutaminyl-tRNA synthetase complexed with tRNA(Gln) and ATP at 2.8 A resolution. , 1989, Science.
[159] E. Westhof,et al. An unusual RNA tertiary interaction has a role for the specific aminoacylation of a transfer RNA. , 1993, Proceedings of the National Academy of Sciences of the United States of America.
[160] B. Felden,et al. A histidine accepting tRNA-like fold at the 3'-end of satellite tobacco mosaic virus RNA. , 1994, Nucleic acids research.
[161] B. Felden,et al. Strategy for RNA recognition by yeast histidyl-tRNA synthetase. , 1997, Bioorganic & medicinal chemistry.
[162] M. Saraste,et al. FEBS Lett , 2000 .
[163] N. Nameki,et al. Identity elements of Thermus thermophilus tRNAThr , 1996, FEBS letters.
[164] M. Hoagland,et al. Biochemistry or molecular biology? the discovery of 'soluble RNA'. , 1996, Trends in biochemical sciences.
[165] L. Mosyak,et al. The crystal structure of phenylalanyl-tRNA synthetase from thermus thermophilus complexed with cognate tRNAPhe. , 1997, Structure.
[166] D. Riesner,et al. Mechanism of discrimination between cognate and non-cognate tRNAs by phenylalanyl-tRNA synthetase from yeast. , 1976, European journal of biochemistry.
[167] S. Pääbo,et al. RNA editing changes the identity of a mitochondrial tRNA in marsupials. , 1996, The EMBO journal.
[168] S. T. Gregory,et al. Effects of mutations at position 36 of tRNAGlu on missense and nonsense suppression in Escherichia coli , 1995, FEBS letters.
[169] K. Musier-Forsyth,et al. Species-specific differences in the operational RNA code for aminoacylation of tRNAPro. , 1998, Biochemistry.
[170] M. Grunberg‐Manago,et al. Tertiary structure of Escherichia coli tRNA(3Thr) in solution and interaction of this tRNA with the cognate threonyl-tRNA synthetase. , 1988, European journal of biochemistry.
[171] J. Skuzeski,et al. Aminoacylation identity switch of turnip yellow mosaic virus RNA from valine to methionine results in an infectious virus. , 1996, Proceedings of the National Academy of Sciences of the United States of America.
[172] D. Söll,et al. Inaccuracy and the recognition of tRNA. , 1990, Progress in nucleic acid research and molecular biology.
[173] P. Schimmel,et al. Rescuing an essential enzyme–RNA complex with a non‐essential appended domain , 1997, The EMBO journal.
[174] B. Lorber,et al. An example of non-conservation of oligomeric structure in prokaryotic aminoacyl-tRNA synthetases. Biochemical and structural properties of glycyl-tRNA synthetase from Thermus thermophilus. , 1996, European journal of biochemistry.
[175] Y. Hou. Discriminating among the discriminator bases of tRNAs. , 1997, Chemistry & biology.
[176] D. Söll,et al. Synthetase competition and tRNA context determine the in vivo identify of tRNA discriminator mutants. , 1992, Journal of molecular biology.
[177] C R Woese,et al. A euryarchaeal lysyl-tRNA synthetase: resemblance to class I synthetases. , 1997, Science.
[178] J Abelson,et al. Evolution of a transfer RNA gene through a point mutation in the anticodon. , 1998, Science.
[179] D. Moras,et al. Recognition of tRNAs by aminoacyl‐tRNA synthetases , 1993, FASEB journal : official publication of the Federation of American Societies for Experimental Biology.
[180] T Suzuki,et al. The 'polysemous' codon--a codon with multiple amino acid assignment caused by dual specificity of tRNA identity. , 1997, The EMBO journal.
[181] D. Söll,et al. Recognition of bases in Escherichia coli tRNA(Gln) by glutaminyl‐tRNA synthetase: a complete identity set. , 1992, The EMBO journal.
[182] H. Ozeki,et al. Genetic study on transfer RNA. , 1973, Advances in biophysics.
[183] P. Schuster. Landscapes and molecular evolution , 1997 .
[184] D. Moras,et al. The aminoacyl‐tRNA synthetase family: Modules at work , 1993, BioEssays : news and reviews in molecular, cellular and developmental biology.
[185] W. McClain,et al. Nucleotides that determine Escherichia coli tRNA(Arg) and tRNA(Lys) acceptor identities revealed by analyses of mutant opal and amber suppressor tRNAs. , 1990, Proceedings of the National Academy of Sciences of the United States of America.
[186] O. Nureki,et al. Major identity determinants in the "augmented D helix" of tRNA(Glu) from Escherichia coli. , 1996, Journal of molecular biology.
[187] Volker A. Erdmann,et al. The Translational Apparatus , 1993, Springer US.
[188] T. Noda,et al. Human alanyl-tRNA synthetase: conservation in evolution of catalytic core and microhelix recognition. , 1995, Biochemistry.
[189] J. Miller,et al. Construction of Escherichia coli amber suppressor tRNA genes. III. Determination of tRNA specificity. , 1990, Journal of molecular biology.
[190] E. Chargaff,et al. Nucleic Acids , 2020, Definitions.
[191] V. Feiz,et al. Fluorine-19 nuclear magnetic resonance as a probe of the solution structure of mutants of 5-fluorouracil-substituted Escherichia coli valine tRNA. , 1992, Journal of molecular biology.
[192] H. Himeno,et al. Discriminator base of tRNA(Asp) is involved in amino acid acceptor activity. , 1989, Biochemical and biophysical research communications.
[193] H. Himeno,et al. Escherichia coli tRNA(Asp) recognition mechanism differing from that of the yeast system. , 1992, Biochemical and biophysical research communications.
[194] O. Uhlenbeck,et al. Specific substitution into the anticodon loop of yeast tyrosine transfer RNA. , 1986, Biochemistry.
[195] D. Söll,et al. Aminoacyl-tRNA synthetases: general features and recognition of transfer RNAs. , 1979, Annual review of biochemistry.
[196] T. Dreher,et al. Specific valylation identity of turnip yellow mosaic virus RNA by yeast valyl-tRNA synthetase is directed by the anticodon in a kinetic rather than affinity-based discrimination. , 1991, European journal of biochemistry.
[197] K. Watanabe,et al. Role of the extra G-C pair at the end of the acceptor stem of tRNA(His) in aminoacylation. , 1989, Nucleic acids research.
[198] S. Ohno,et al. Four primordial modes of tRNA-synthetase recognition, determined by the (G,C) operational code. , 1997, Proceedings of the National Academy of Sciences of the United States of America.
[199] V. Vlassov,et al. Interaction of tRNAPhe and tRNAVal with aminoacyl-tRNA synthetases. A chemical modification study. , 1983, European journal of biochemistry.
[200] P. Schimmel,et al. Functional compensation of a recognition-defective transfer RNA by a distal base pair substitution. , 1992, Biochemistry.
[201] W. McClain,et al. Functional Evidence for Indirect Recognition of G·U in tRNAAla by Alanyl-tRNA Synthetase , 1996, Science.
[202] R Giegé,et al. Identity switches between tRNAs aminoacylated by class I glutaminyl- and class II aspartyl-tRNA synthetases. , 1994, Biochemistry.
[203] R. Ogden,et al. Changing the identity of a transfer RNA , 1986, Nature.
[204] V. Erdmann,et al. Base-analog-induced aminoacylation of an RNA helix by a tRNA synthetase , 1995 .
[205] A. Weiner,et al. tRNA-like structures tag the 3' ends of genomic RNA molecules for replication: implications for the origin of protein synthesis. , 1987, Proceedings of the National Academy of Sciences of the United States of America.
[206] R. Giegé,et al. Identity of prokaryotic and eukaryotic tRNA(Asp) for aminoacylation by aspartyl-tRNA synthetase from Thermus thermophilus. , 1996, Biochemistry.
[207] D. Söll,et al. Interactions between tRNA identity nucleotides and their recognition sites in glutaminyl-tRNA synthetase determine the cognate amino acid affinity of the enzyme. , 1996, Proceedings of the National Academy of Sciences of the United States of America.
[208] H. Gross,et al. Identity elements of human tRNA(Leu): structural requirements for converting human tRNA(Ser) into a leucine acceptor in vitro. , 1995, Nucleic acids research.
[209] B. Ames,et al. The leader mRNA of the histidine attenuator region resembles tRNAHis: possible general regulatory implications. , 1983, Proceedings of the National Academy of Sciences of the United States of America.
[210] P. Schimmel,et al. Triple aminoacylation specificity of a chimerized transfer RNA. , 1993, Biochemistry.
[211] A. Fersht,et al. Use of binding energy in catalysis: optimization of rate in a multistep reaction. , 1993, Biochemistry.
[212] K. Watanabe,et al. Primary and higher order structures of nematode (Ascaris suum) mitochondrial tRNAs lacking either the T or D stem. , 1994, The Journal of biological chemistry.
[213] W. McClain,et al. The importance of tRNA backbone-mediated interactions with synthetase for aminoacylation. , 1998, Proceedings of the National Academy of Sciences of the United States of America.
[214] B. Ganem. RNA world , 1987, Nature.
[215] C. Florentz,et al. Identity elements for specific aminoacylation of yeast tRNA(Asp) by cognate aspartyl-tRNA synthetase , 1991, Science.
[216] W. McClain. Transfer RNA identity , 1993, FASEB journal : official publication of the Federation of American Societies for Experimental Biology.
[217] Dieter Söll,et al. Trna: Structure, Biosynthesis, and Function , 1995 .
[218] H. Himeno,et al. In vitro study of E.coli tRNA(Arg) and tRNA(Lys) identity elements. , 1992, Nucleic acids research.
[219] P. Schultz,et al. Characterization of an 'orthogonal' suppressor tRNA derived from E. coli tRNA2(Gln). , 1997, Chemistry & biology.
[220] I. Willis,et al. Analysis of acceptor stem base pairing on tRNA(Trp) aminoacylation and function in vivo. , 1994, The Journal of biological chemistry.
[221] N. Imura,et al. Reconstitution of Alanine Acceptor Activity from Fragments of Yeast tRNAAlaII , 1969, Nature.
[222] Ya-Ming Hou,et al. Enzymatic aminoacylation of tRNA acceptor stem helices with cysteine is dependent on a single nucleotide. , 1995, Biochemistry.
[223] L. Kisselev,et al. Transfer RNAPhe isoacceptors possess non‐identical set of identity elements at high and low Mg2+ concentration , 1997, FEBS letters.
[224] C. Florentz,et al. Effect of conformational features on the aminoacylation of tRNAs and consequences on the permutation of tRNA specificities. , 1992, Journal of molecular biology.
[225] V. Vlassov,et al. Protection of phosphodiester bonds in yeast tRNAVal by its cognate aminoacyl‐tRNA synthetase against alkylation by ethylnitrosourea , 1981, FEBS letters.
[226] P. Schimmel,et al. Species-specific microhelix aminoacylation by a eukaryotic pathogen tRNA synthetase dependent on a single base pair. , 1995, Biochemistry.
[227] L. H. Schulman,et al. Anticodon switching changes the identity of methionine and valine transfer RNAs. , 1988, Science.
[228] U. Englisch,et al. The modified wobble base inosine in yeast tRNAIle is a positive determinant for aminoacylation by isoleucyl-tRNA synthetase. , 1997, Biochemistry.
[229] L. H. Schulman,et al. An anticodon change switches the identity of E. coli tRNA(mMet) from methionine to threonine. , 1990, Nucleic acids research.
[230] A. Weiner,et al. Molecular Evolution: Unlocking the secrets of retroviral evolution , 1994, Current Biology.
[231] C. Florentz,et al. Efficient aminoacylation of resected RNA helices by class II aspartyl‐tRNA synthetase dependent on a single nucleotide. , 1994, The EMBO journal.
[232] C. Florentz,et al. A single methyl group prevents the mischarging of a tRNA , 1994, Nature Structural Biology.
[233] J. Cavarelli,et al. Structures of RNA-binding proteins , 1997, Quarterly Reviews of Biophysics.
[234] O. Uhlenbeck,et al. Biochemical and physical characterization of an unmodified yeast phenylalanine transfer RNA transcribed in vitro. , 1988, Proceedings of the National Academy of Sciences of the United States of America.
[235] L. H. Schulman,et al. The anticodon contains a major element of the identity of arginine transfer RNAs. , 1989, Science.
[236] Efficient mischarging of a viral tRNA-like structure and aminoacylation of a minihelix containing a pseudoknot: histidinylation of turnip yellow mosaic virus RNA. , 1992, Nucleic acids research.
[237] M Graffe,et al. The specificity of translational control switched with transfer RNA identity rules. , 1992, Science.
[238] H. Trachsel. Translation In Eukaryotes , 1991 .
[239] P. Schimmel,et al. An Escherichia coli tyrosine transfer RNA is a leucine-specific transfer RNA in the yeast Saccharomyces cerevisiae. , 1991, Proceedings of the National Academy of Sciences of the United States of America.
[240] C. Florentz,et al. tRNA structure and aminoacylation efficiency. , 1993, Progress in nucleic acid research and molecular biology.
[241] D. Söll,et al. A 2-thiouridine derivative in tRNAGlu is a positive determinant for aminoacylation by Escherichia coli glutamyl-tRNA synthetase. , 1993, Biochemistry.
[242] P. Schimmel,et al. Genetic code in evolution: switching species‐specific aminoacylation with a peptide transplant , 1998, The EMBO journal.
[243] R. Simons,et al. RNA structure and function , 1998 .