Determinant of cistron specificity in bacterial ribosomes

The sequence of the 3′-terminus of 16S RNA from different bacteria has been determined. Complementarity relationships between this sequence and a purine-rich tract in the ribosome binding site of different bacterial mRNAs suggest that the 3′-end of 16S RNA determines the intrinsic capacity of ribosomes to translate a particular cistron.

[1]  Y. Groner,et al.  Fractionation of translation initiation factor B (F3) into cistron‐specific species , 1970, FEBS letters.

[2]  B. Barrell,et al.  Isolation and Sequence Analysis of a Ribosome-protected Fragment from Bacteriophage φX 174 DNA , 1973 .

[3]  W. Szer,et al.  Purification and properties of initiation factor IF-3 from Caulobacter crescentus. , 1974, The Journal of biological chemistry.

[4]  W. Szer,et al.  Interaction of Escherichia coli 30S ribosomal subunits with MS2 phage RNA in the absence of initiation factors. , 1974, Proceedings of the National Academy of Sciences of the United States of America.

[5]  S. Cory,et al.  Untranslated Nucleotide Sequences in R17 Bacteriophage RNA , 1970 .

[6]  J. Steitz Polypeptide Chain Initiation: Nucleotide Sequences of the Three Ribosomal Binding Sites in Bacteriophage R17 RNA , 1969, Nature.

[7]  I. Tinoco,et al.  Estimation of Secondary Structure in Ribonucleic Acids , 1971, Nature.

[8]  T. Boon Inactivation of ribosomes in vitro by colicin E 3 . , 1971, Proceedings of the National Academy of Sciences of the United States of America.

[9]  L. Bosch,et al.  Initiation factor-dependent binding of MS2 RNA to 30-S ribosomes and the recycling of IF-3. , 1973, European journal of biochemistry.

[10]  R. Kamen,et al.  Host subunit of Q replicase is translation control factor i. , 1972, Nature: New biology.

[11]  A. Wahba,et al.  Inhibition of synthetic and natural messenger translation. II. Specificity and mechanism of action of a protein isolated from Escherichia coli MRE 600 ribosomes. , 1974, The Journal of biological chemistry.

[12]  W. Fiers,et al.  Studies on the bacteriophage MS2. G‐U‐G as the initiation codon of the A‐protein cistron , 1973, FEBS letters.

[13]  R. Contreras,et al.  Studies on the bacteriophage MS2. The untranslated 5'-terminal nucleotide sequence preceding the first cistron. , 1971, European journal of biochemistry.

[14]  J. Shine,et al.  Identical 3'-terminal octanucleotide sequence in 18S ribosomal ribonucleic acid from different eukaryotes. A proposed role for this sequence in the recognition of terminator codons. , 1974, The Biochemical journal.

[15]  J. Steitz,et al.  Direct physical evidence for secondary structure in an isolated fragment of R17 bacteriophage mRNA , 1974, Nature.

[16]  R. Kenner A protein-nucleic acid crosslink in 30S ribosomes. , 1973, Biochemical and biophysical research communications.

[17]  J. Hindley,et al.  Sequence of a Ribosome Binding Site in Bacteriophage Qβ-RNA , 1969, Nature.

[18]  H. Weith,et al.  Polynucleotide Sequence Analysis by Sequential Base Elimination: 3'-Terminus of Phage Qβ RNA , 1969, Science.

[19]  H. Lodish Species Specificity of Polypeptide Chain Initiation , 1969, Nature.

[20]  W. Szer,et al.  Messenger selection by bacterial ribosomes. , 1973, Proceedings of the National Academy of Sciences of the United States of America.

[21]  H. Inouye,et al.  Physical and functional homology between ribosomal protein S1 and interference factor i. , 1974, European journal of biochemistry.

[22]  Y. Groner,et al.  Cistron specific translation control protein in Escherichia coli. , 1972, Nature: New biology.

[23]  J. Shine,et al.  Occurrence of heat-dissociable ribosomal RNA in insects: the presence of three polynucleotide chains in 26 S RNA from cultured Aedes aegypti cells. , 1973, Journal of molecular biology.

[24]  W. Szer,et al.  Translation of MS2 RNA by ribosomes from different bacterial species. , 1970, Biochemical and biophysical research communications.

[25]  W. Fiers,et al.  Nucleotide Sequence of the Gene Coding for the Bacteriophage MS2 Coat Protein , 1972, Nature.

[26]  J. Shine,et al.  Conserved terminal sequence in 18SrRNA may represent terminator anticodons. , 1973, Nature: New biology.

[27]  A. Wahba,et al.  Purification and properties of chain initiation factor 3 from T4-infected and uninfected Escherichia coli MRE 600. Stimulation of translation of synthetic and natural messengers. , 1974, The Journal of biological chemistry.

[28]  R. Contreras,et al.  Bacteriophage Ms2 RNA: nucleotide sequence of the end of the a protein gene and the intercistronic region. , 1973, Nature: New biology.

[29]  M. Stallcup,et al.  Initiation of protein synthesis in vitro by a clostridial system. II. The roles of initiation factors and salt-washed ribosomes in determining specificity in the translation of natural messenger ribonucleic acids. , 1973, The Journal of biological chemistry.

[30]  J. Steitz Specific recognition of non-initiator regions in RNA bacteriophage messengers by ribosomes of Bacillus stearothermophilus. , 1973, Journal of molecular biology.

[31]  J. Hindley,et al.  Ribosome Binding Site of Qβ RNA Polymerase Cistron , 1971 .

[32]  I. Holland,et al.  Effect of colicin E3 upon the 30S ribosomal subunit of Escherichia coli. , 1971, Proceedings of the National Academy of Sciences of the United States of America.

[33]  J. Steitz,et al.  Cistron specificity of 30S ribosomes heterologously reconstituted with components from Escherichia coli and Bacillus stearothermophilus. , 1974, Biochemistry.

[34]  J. Hindley,et al.  Nucleotide sequence of a ribosome binding site on RNA synthesized in vitro from coliphage T7. , 1973, Nature: New biology.

[35]  Y. Groner,et al.  Effect of a purified initiation factor F3 (B) on the selection of ribosomal binding sites on phage MS2 RNA. , 1971, Nature: New biology.

[36]  G. Jay,et al.  Host interference with viral gene expression: mode of action of bacterial factor i. , 1974, Journal of molecular biology.

[37]  S. Ochoa,et al.  Messenger discriminating species of initiation factor F3. , 1971, Nature: New biology.

[38]  M. Stallcup,et al.  Ribsome and messenger specificity in protein synthesis by bacteria. , 1974, Biochemical and biophysical research communications.

[39]  J. Hunt Terminal-sequence studies of high-molecular-weight ribonucleic acid. The 3′-termini of rabbit reticulocyte ribosomal ribonucleic acid , 1970 .

[40]  H. Lodish Bacteriophage f2 RNA: Control of Translation and Gene Order , 1968, Nature.

[41]  N. Maizels E. coli lactose operon ribosome binding site , 1974, Nature.

[42]  H. Lodish Thermal melting of bacteriophage f2 RNA and initiation of synthesis of the maturation protein. , 1971, Journal of molecular biology.

[43]  J. Hunt TERMINAL-SEQUENCE STUDIES OF HIGH-MOLECULAR-WEIGHT RIBONUCLEIC. THE REACTION OF PERIODATE-OXIDIZED RIBONUCLEOSIDES , 5'-RIBONUCLEOTIDES AND RIBONUCLEIC ACID WITH ISONIAZID. , 1965, The Biochemical journal.

[44]  H. Lodish Specificity in Bacterial Protein Synthesis : Role of Initiation Factors and Ribosomal Subunits , 1970, Nature.

[45]  J. Steitz Discriminatory ribosome rebinding of isolated regions of protein synthesis initiation from the ribonucleic acid of bacteriophage R17. , 1973, Proceedings of the National Academy of Sciences of the United States of America.

[46]  P. Doty,et al.  Self-complementary oligoribonucleotides: effects of helix defects and guanylic acid-cytidylic acid base pairs. , 1971, Journal of molecular biology.

[47]  S. Weissman,et al.  Nucleotide sequence of a ribosome attachment site of bacteriophage f2 RNA. , 1970, Biochemical and biophysical research communications.

[48]  H. Lodish,et al.  Secondary structure of bacteriophage f2 ribonucleic acid and the initiation of in vitro protein biosynthesis. , 1970, Journal of molecular biology.

[49]  M. Billeter,et al.  Localization of Qβ Maturation Cistron Ribosome Binding Site , 1971 .

[50]  M. Billeter,et al.  Molecular basis for repressor activity of Q replicase. , 1972, Nature: New biology.

[51]  T. Ikemura,et al.  Specific inactivation of 16S ribosomal RNA induced by colicin E3 in vivo. , 1971, Proceedings of the National Academy of Sciences of the United States of America.

[52]  M. Stallcup,et al.  Initiation of protein synthesis in vitro by a clostridial system. I. Specificity in the translation of natural messenger ribonucleic acids. , 1973, The Journal of biological chemistry.

[53]  W. Held,et al.  Role of 16S ribosomal ribonucleic acid and the 30S ribosomal protein S12 in the initiation of natural messenger ribonucleic acid translation. , 1974, Biochemistry.

[54]  J. Shine,et al.  The 3'-terminal sequence of Escherichia coli 16S ribosomal RNA: complementarity to nonsense triplets and ribosome binding sites. , 1974, Proceedings of the National Academy of Sciences of the United States of America.

[55]  R. Kamen,et al.  Reconstitution of Q replicase lacking subunit with protein-synthesis-interference factor i. , 1972, European journal of biochemistry.