Co-C force constants from resonance Raman spectra of alkylcobalamins: insensitivity to dimethylbenzylimidazole coordination

The Co-C stretching vibration has been identified in resonance Raman spectra of alkyl-cobalamins, via isotope substitution, permitting estimation of the Co-C force constants, f = 1.85, 1.77 and 1.50 mdyn A−1 for methyl-, ethyl- and deoxyadenosyl-cobalamin, respectively (νCo-C = 506, 471 and 442/429 cm−1). These values scale with the reported bond dissociation energies, and support the view that the Co-C bond weakens with increasing bulk of the alkyl group due to steric interaction with the corrin ring. However, the force constants are unaffected by dissociation of the dimethylbenzimidazole ligand at low pH, even though the bond dissociation energy rises significantly upon DMB dissociation in AdoCbl. This increase must therefore reflect destabilization of the CoII product, rather than Co-C bond strengthening in the AdoCbl ground state. The insensitivity of the force constants to dimethylbenzimidazole dissociation implies that the steric effect of DMB coordination is not transmitted to the Co-C bond by the corrin ring. Consistent with this interpretation, the RR frequencies of the corrin ring modes are minimally perturbed by DMB dissociation, supporting earlier NMR results that indicated little change in the corrin conformation.

[1]  J. M. Puckett,et al.  Near-IR FT-Raman Spectroscopy of Methyl-B12 and Other Cobalamins and of Imidazole and Imidazolate Methylcobinamide Derivatives in Aqueous Solution , 1996 .

[2]  E. Vitols,et al.  Cobamides and ribonucleotide reduction. VI. Enzyme-catalyzed hydrogen exchange between water and deoxyadenosylcobalamin. , 1968, The Journal of biological chemistry.

[3]  J. Halpern,et al.  Kinetic determination of transition metal-alkyl bond dissociation energies: application to organocobalt compounds related to B12 coenzymes , 1982 .

[4]  B. Hay,et al.  Thermolysis of the cobalt-carbon bond of adenosylcobalamin. 2. Products, kinetics, and cobalt-carbon bond dissociation energy in aqueous solution , 1986 .

[5]  C. Kratky,et al.  Coenzyme B12 chemistry: the crystal and molecular structure of cob(II)alamin , 1989 .

[6]  R. Matthews,et al.  Cobalamin‐dependent methionine synthase , 1990, FASEB journal : official publication of the Federation of American Societies for Experimental Biology.

[7]  J. M. Puckett,et al.  Structural and electronic similarity but functional difference in methylmalonyl-CoA mutase between coenzyme B12 and the analog 2',5'-dideoxyadenosylcobalamin. , 1995, Biochemistry.

[8]  R. Czernuszewicz,et al.  A Simple Low-Temperature Cryostat for Resonance Raman Studies of Frozen Protein Solutions , 1983 .

[9]  R. Finke,et al.  Adenosylcobinamide, the Base-Free Analog of Coenzyme B12 (Adenosylcobalamin). 1.1 Probing the Role of the Axial 5,6-Dimethylbenzimidazole Base in Coenzyme B12 via Exogenous Axial Base Kassociation, ΔH, and ΔS Measurements plus a Critical Review of the Relevant Biochemical Literature , 1996 .

[10]  S. M. Chemaly Vitamin B12 complexes with phosphite ligands. Part 2. Coordination and acid-base equilibria , 1991 .

[11]  T. Spiro,et al.  Visible and near‐ultraviolet resonance Raman spectra of photolabile vitamin B12 derivatives with a rapid‐flow technique , 1977 .

[12]  Herman A. Szymanski,et al.  Interpreted infrared spectra , 1964 .

[13]  R. Hester,et al.  Resonance Raman spectra of vitamin B12 and some cobalt corrinoid derivatives , 1973 .

[14]  R. Matthews,et al.  How a protein binds B12: A 3.0 A X-ray structure of B12-binding domains of methionine synthase. , 1994, Science.

[15]  D. Byler,et al.  Raman spectroscopic studies of CH3- and CD3(4-tert-butylpyridine)-bis(dimethylglyoximato) cobalt (III) complexes: reassignment of the methyl-cobalt stretching vibration , 1984 .

[16]  R. Finke,et al.  Neopentylcobalamin (NeopentylB12) cobalt-carbon bond thermolysis products, kinetics, activation parameters, and bond dissociation energy : a chemical model exhibiting 106 of the 1012 enzymic activation of coenzyme B12's cobalt-carbon bond , 1993 .

[17]  J. M. Puckett,et al.  The Co−CH3 Bond in Imine/Oxime B12 Models. Influence of the Orientation and Donor Properties of the trans Ligand As Assessed by FT-Raman Spectroscopy , 1996 .

[18]  B. Beatrix,et al.  Coordination of a histidine residue of the protein‐component S to the cobalt atom in coenzyme B12‐dependent glutamate mutase from Clostridium cochlearium , 1995, FEBS letters.

[19]  S. Nie,et al.  Near-infrared Fourier transform Raman spectroscopy of photolabile organocobalt B12 and model compounds. 1. Detection of the cobalt-carbon stretching mode in the solid state and in solution , 1989 .

[20]  F. Ng,et al.  Ligand Effects on Transition-Metal-Alkyl Bond Dissociation Energies. , 1982 .

[21]  Thomas G. Spiro,et al.  Biological applications of Raman spectroscopy , 1987 .

[22]  P. Leadlay,et al.  How coenzyme B12 radicals are generated: the crystal structure of methylmalonyl-coenzyme A mutase at 2 A resolution. , 1996, Structure.

[23]  R. Finke,et al.  Methylcobalamin's full- vs. "half"-strength cobalt-carbon sigma bonds and bond dissociation enthalpies: A >10(15) Co-CH3 homolysis rate enhancement following one-antibonding-electron reduction of methlycobalamin. , 1992, Journal of the American Chemical Society.

[24]  B. Hay,et al.  Thermolysis of the cobalt-carbon bond in adenosylcorrins. 3. Quantification of the axial base effect in adenosylcobalamin by the synthesis and thermolysis of axial base-free adenosylcobinamide. Insights into the energetics of enzyme-assisted cobalt-carbon bond homolysis , 1987 .

[25]  B. Kräutler Thermodynamic trans-effects of the nucleotide base in the B12 coenzymes , 1987 .

[26]  R. Finke,et al.  Adocobinamide, the Base-off Analog of Coenzyme B12 (Adocobalamin). 2.1 Probing the “Base-on” Effect in Coenzyme B12 via Cobalt−Carbon Bond Thermolysis Product and Kinetic Studies as a Function of Exogenous Pyridine Bases , 1996 .

[27]  R. Banerjee,et al.  Evidence that cobalt-carbon bond homolysis is coupled to hydrogen atom abstraction from substrate in methylmalonyl-CoA mutase. , 1997, Biochemistry.

[28]  S. Nie,et al.  Near-infrared Fourier transform Raman spectroscopy of photolabile organocobalt B12 and model compounds. 3. Vibrational assessment of factors affecting the cobalt-carbon bond in models , 1990 .

[29]  Babior Bm The mechanism of adenosylcobalamin-dependent rearrangements. , 1988 .

[30]  M. Summers,et al.  The structure of a B12 coenzyme: methylcobalamin studies by x-ray and NMR methods , 1985 .

[31]  J. Halpern,et al.  Why does nature not use the porphyrin ligand in vitamin B12 , 1987 .

[32]  A. Bax,et al.  New insights into the solution behavior of cobalamins. Studies of the base-off form of coenzyme B12 using modern two-dimensional NMR methods , 1987 .

[33]  N. Yu,et al.  Near-Infrared Fourier Transform Raman Spectroscopy of B12 Models. 4. Steric and Electronic Factors Affecting the Co-C Bond in Organocobalt Complexes , 1995 .

[34]  J. Halpern Mechanisms of coenzyme B12-dependent rearrangements. , 1985, Science.

[35]  K. Kunze,et al.  Occurrence of a 1,2 shift during enzymic and chemical oxidation of a terminal acetylene , 1980 .

[36]  B. Golding,et al.  Molecular mechanisms in bioorganic processes , 1990 .

[37]  R. Finke,et al.  Cobalt-carbon homolysis and bond dissociation energy studies of biological alkylcobalamins: methylcobalamin, including a.gtoreq.1015 Co-CH3 homolysis rate enhancement at 25.degree. following one-electron reduction , 1990 .

[38]  R. Finke,et al.  Coenzyme B12 Chemical Precedent Studies: Probing the Role of the Imidazole Base-on Motif Found in B12-Dependent Methylmalonyl-CoA Mutase , 1997 .

[39]  R. Banerjee,et al.  Coenzyme B12 Is Coordinated by Histidine and Not Dimethylbenzimidazole on Methylmalonyl-CoA Mutase , 1995 .

[40]  M. Chance,et al.  Temperature dependent coordination effects in base-off adenosyl and methylcobalamin by X-ray edge spectroscopy. , 1993, Journal of inorganic biochemistry.

[41]  S. M. Chemaly Vitamin B12 complexes with phosphite ligands. Part 1. UV-visible spectra and temperature-dependent equilibria☆ , 1991 .

[42]  T. Spiro,et al.  Resonance Raman spectra of vitamin B 12 derivatives. , 1973, Journal of the American Chemical Society.

[43]  R. Banerjee,et al.  The Yin-Yang of cobalamin biochemistry. , 1997, Chemistry & biology.